RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 NBPF6Q5VWK0 638 aa14.52□□□□□ -0.09
VARS2-205ENST00000469358 NBPF4Q96M43 638 aa14.52□□□□□ -0.09
VARS2-205ENST00000469358 XRN1Q8IZH2 1706 aaKnown RBP14.52□□□□□ -0.09
VARS2-205ENST00000469358 DIP2BQ9P265 1576 aa14.52□□□□□ -0.09
VARS2-205ENST00000469358 SETD1BQ9UPS6 1966 aaKnown RBP14.52□□□□□ -0.09
VARS2-205ENST00000469358 FAM227BQ96M60 508 aa14.51□□□□□ -0.09
VARS2-205ENST00000469358 TUBGCP6Q96RT7 1819 aa14.51□□□□□ -0.09
VARS2-205ENST00000469358 EIF4A1P60842 406 aaKnown RBP14.51□□□□□ -0.09
VARS2-205ENST00000469358 CAMK4Q16566 473 aa14.51□□□□□ -0.09
VARS2-205ENST00000469358 SASS6Q6UVJ0 657 aa14.51□□□□□ -0.09
VARS2-205ENST00000469358 KLHDC4Q8TBB5 520 aa14.51□□□□□ -0.09
VARS2-205ENST00000469358 PDRG1Q9NUG6 133 aa14.51□□□□□ -0.09
VARS2-205ENST00000469358 RAB11FIP3O75154 756 aa14.5□□□□□ -0.09
VARS2-205ENST00000469358 PHF14O94880 888 aa14.5□□□□□ -0.09
VARS2-205ENST00000469358 CSPP1Q1MSJ5 1256 aa14.5□□□□□ -0.09
VARS2-205ENST00000469358 ME3Q16798 604 aa14.5□□□□□ -0.09
VARS2-205ENST00000469358 CCDC8Q9H0W5 538 aaPredicted RBP14.5□□□□□ -0.09
VARS2-205ENST00000469358 SIL1Q9H173 461 aa14.5□□□□□ -0.09
VARS2-205ENST00000469358 PRDM10Q9NQV6 1147 aa14.5□□□□□ -0.09
VARS2-205ENST00000469358 MTMR6Q9Y217 621 aa14.5□□□□□ -0.09
VARS2-205ENST00000469358 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.5□□□□□ -0.09
VARS2-205ENST00000469358 RGPD8O14715 1765 aaPredicted RBP14.5□□□□□ -0.09
VARS2-205ENST00000469358 HTATSF1O43719 755 aaKnown RBP14.49□□□□□ -0.09
VARS2-205ENST00000469358 MCM5P33992 734 aa14.49□□□□□ -0.09
VARS2-205ENST00000469358 UBE2HP62256 183 aa14.49□□□□□ -0.09
VARS2-205ENST00000469358 AIMP1Q12904 312 aaKnown RBP14.49□□□□□ -0.09
VARS2-205ENST00000469358 TLR7Q9NYK1 1049 aaKnown RBP14.49□□□□□ -0.09
VARS2-205ENST00000469358 NALCNQ8IZF0 1738 aa14.49□□□□□ -0.09
VARS2-205ENST00000469358 CHGBP05060 677 aa14.49□□□□□ -0.09
VARS2-205ENST00000469358 KCNA6P17658 529 aa14.49□□□□□ -0.09
VARS2-205ENST00000469358 NOLC1Q14978 699 aaKnown RBP eCLIP14.49□□□□□ -0.09
VARS2-205ENST00000469358 AACSQ86V21 672 aa14.49□□□□□ -0.09
VARS2-205ENST00000469358 MAP3K2Q9Y2U5 619 aa14.49□□□□□ -0.09
VARS2-205ENST00000469358 FAM208AQ9UK61 1670 aaKnown RBP14.49□□□□□ -0.09
VARS2-205ENST00000469358 KCNJ4P48050 445 aa14.48□□□□□ -0.09
VARS2-205ENST00000469358 EDC3Q96F86 508 aaKnown RBP14.48□□□□□ -0.09
VARS2-205ENST00000469358 C9orf78Q9NZ63 289 aaPredicted RBP14.48□□□□□ -0.09
VARS2-205ENST00000469358 AOX1Q06278 1338 aa14.48□□□□□ -0.09
VARS2-205ENST00000469358 TERF1P54274 439 aa14.48□□□□□ -0.09
VARS2-205ENST00000469358 STK3Q13188 491 aa14.48□□□□□ -0.09
VARS2-205ENST00000469358 IL17RAQ96F46 866 aa14.48□□□□□ -0.09
VARS2-205ENST00000469358 TPCN1Q9ULQ1 816 aa14.48□□□□□ -0.09
VARS2-205ENST00000469358 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.48□□□□□ -0.09
VARS2-205ENST00000469358 EID1Q9Y6B2 187 aa14.48□□□□□ -0.09
VARS2-205ENST00000469358 NDUFB9Q9Y6M9 179 aa14.48□□□□□ -0.09
VARS2-205ENST00000469358 TFIP11Q9UBB9 837 aaKnown RBP14.48□□□□□ -0.09
VARS2-205ENST00000469358 ADCY9O60503 1353 aa14.48□□□□□ -0.09
VARS2-205ENST00000469358 TOPAZ1Q8N9V7 1692 aa14.47□□□□□ -0.09
VARS2-205ENST00000469358 BTBD11A6QL63 1104 aa14.47□□□□□ -0.09
VARS2-205ENST00000469358 CLASRPQ8N2M8 674 aaKnown RBP14.47□□□□□ -0.09
VARS2-205ENST00000469358 IFIT2P09913 472 aaKnown RBP14.47□□□□□ -0.09
VARS2-205ENST00000469358 CDC37L1Q7L3B6 337 aa14.47□□□□□ -0.09
VARS2-205ENST00000469358 TMEM87AQ8NBN3 555 aa14.47□□□□□ -0.09
VARS2-205ENST00000469358 BCL11BQ9C0K0 894 aaPredicted RBP14.47□□□□□ -0.09
VARS2-205ENST00000469358 PYCARDQ9ULZ3 195 aa14.47□□□□□ -0.09
VARS2-205ENST00000469358 PLEKHG1Q9ULL1 1385 aa14.47□□□□□ -0.09
VARS2-205ENST00000469358 KDM4AO75164 1064 aa14.47□□□□□ -0.09
VARS2-205ENST00000469358 GLRX3O76003 335 aaKnown RBP14.47□□□□□ -0.09
VARS2-205ENST00000469358 CKAP2LQ8IYA6 745 aa14.47□□□□□ -0.09
VARS2-205ENST00000469358 BOLA2Q9H3K6 86 aa14.47□□□□□ -0.09
VARS2-205ENST00000469358 RBM8AQ9Y5S9 174 aaKnown RBP14.47□□□□□ -0.09
VARS2-205ENST00000469358 NWD1Q149M9 1564 aa14.47□□□□□ -0.09
VARS2-205ENST00000469358 FMN2Q9NZ56 1722 aa14.46□□□□□ -0.09
VARS2-205ENST00000469358 TEFQ10587 303 aa14.46□□□□□ -0.09
VARS2-205ENST00000469358 PIK3C2AO00443 1686 aa14.46□□□□□ -0.09
VARS2-205ENST00000469358 LIG1P18858 919 aa14.46□□□□□ -0.09
VARS2-205ENST00000469358 NMIQ13287 307 aaPredicted RBP14.46□□□□□ -0.09
VARS2-205ENST00000469358 ZNF530Q6P9A1 599 aaPredicted RBP14.46□□□□□ -0.09
VARS2-205ENST00000469358 ECHDC1Q9NTX5 307 aa14.46□□□□□ -0.09
VARS2-205ENST00000469358 CYP46A1Q9Y6A2 500 aa14.46□□□□□ -0.09
VARS2-205ENST00000469358 DYNC1I1O14576 645 aa14.46□□□□□ -0.1
VARS2-205ENST00000469358 PPFIA3O75145 1194 aa14.46□□□□□ -0.1
VARS2-205ENST00000469358 TTC6Q86TZ1 520 aa14.46□□□□□ -0.1
VARS2-205ENST00000469358 PIBF1Q8WXW3 757 aa14.46□□□□□ -0.1
VARS2-205ENST00000469358 FUCA2Q9BTY2 467 aa14.46□□□□□ -0.1
VARS2-205ENST00000469358 KCNF1Q9H3M0 494 aa14.46□□□□□ -0.1
VARS2-205ENST00000469358 CCDC9Q9Y3X0 531 aaKnown RBP14.46□□□□□ -0.1
VARS2-205ENST00000469358 EAF2Q96CJ1 260 aaPredicted RBP14.45□□□□□ -0.1
VARS2-205ENST00000469358 A0A0D9SFI3 127 aa14.45□□□□□ -0.1
VARS2-205ENST00000469358 UBR1Q8IWV7 1749 aa14.45□□□□□ -0.1
VARS2-205ENST00000469358 PIP4K2AP48426 406 aaPredicted RBP14.44□□□□□ -0.1
VARS2-205ENST00000469358 LARP1BQ659C4 914 aaKnown RBP14.44□□□□□ -0.1
VARS2-205ENST00000469358 CREB3L3Q68CJ9 461 aa14.44□□□□□ -0.1
VARS2-205ENST00000469358 LUZP1Q86V48 1076 aa14.44□□□□□ -0.1
VARS2-205ENST00000469358 ZNF710Q8N1W2 664 aa14.44□□□□□ -0.1
VARS2-205ENST00000469358 FAM184AQ8NB25 1140 aa14.44□□□□□ -0.1
VARS2-205ENST00000469358 ZSWIM6Q9HCJ5 1215 aa14.44□□□□□ -0.1
VARS2-205ENST00000469358 SASH1O94885 1247 aa14.44□□□□□ -0.1
VARS2-205ENST00000469358 FOSBP53539 338 aa14.44□□□□□ -0.1
VARS2-205ENST00000469358 NECTIN1Q15223 517 aa14.44□□□□□ -0.1
VARS2-205ENST00000469358 SUCLG2Q96I99 432 aa14.44□□□□□ -0.1
VARS2-205ENST00000469358 LMOD2Q6P5Q4 547 aa14.43□□□□□ -0.1
VARS2-205ENST00000469358 KAZALD1Q96I82 304 aa14.43□□□□□ -0.1
VARS2-205ENST00000469358 CCDC171Q6TFL3 1326 aa14.43□□□□□ -0.1
VARS2-205ENST00000469358 VPS53Q5VIR6 699 aa14.43□□□□□ -0.1
VARS2-205ENST00000469358 DDX11Q96FC9 970 aa14.43□□□□□ -0.1
VARS2-205ENST00000469358 UVSSAQ2YD98 709 aa14.43□□□□□ -0.1
VARS2-205ENST00000469358 ZNF589Q86UQ0 364 aaPredicted RBP14.43□□□□□ -0.1
VARS2-205ENST00000469358 BICC1Q9H694 974 aaKnown RBP14.43□□□□□ -0.1
VARS2-205ENST00000469358 DIP2AQ14689 1571 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms