RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ERBB4Q15303 1308 aa18.9■□□□□ 0.62
COL27A1-203ENST00000468565 ZNF652Q9Y2D9 606 aa18.9■□□□□ 0.62
COL27A1-203ENST00000468565 CCDC184Q52MB2 194 aa18.89■□□□□ 0.61
COL27A1-203ENST00000468565 CHL1O00533 1208 aa18.88■□□□□ 0.61
COL27A1-203ENST00000468565 PIM2Q9P1W9 311 aa18.88■□□□□ 0.61
COL27A1-203ENST00000468565 SETDB2Q96T68 719 aa18.88■□□□□ 0.61
COL27A1-203ENST00000468565 BCS1LQ9Y276 419 aa18.88■□□□□ 0.61
COL27A1-203ENST00000468565 APAF1O14727 1248 aa18.87■□□□□ 0.61
COL27A1-203ENST00000468565 ZNF784Q8NCA9 323 aaPredicted RBP18.87■□□□□ 0.61
COL27A1-203ENST00000468565 SLC4A2P04920 1241 aa18.86■□□□□ 0.61
COL27A1-203ENST00000468565 CHRNA5P30532 468 aa18.86■□□□□ 0.61
COL27A1-203ENST00000468565 COL11A2P13942 1736 aaPredicted RBP18.86■□□□□ 0.61
COL27A1-203ENST00000468565 DALRD3Q5D0E6 543 aaKnown RBP18.85■□□□□ 0.61
COL27A1-203ENST00000468565 PRR5LQ6MZQ0 368 aa18.85■□□□□ 0.61
COL27A1-203ENST00000468565 CFAP44Q96MT7 982 aa18.84■□□□□ 0.61
COL27A1-203ENST00000468565 PDZRN3Q9UPQ7 1066 aa18.84■□□□□ 0.61
COL27A1-203ENST00000468565 ERVV-1B6SEH8 477 aa18.84■□□□□ 0.61
COL27A1-203ENST00000468565 MRS2Q9HD23 443 aa18.84■□□□□ 0.61
COL27A1-203ENST00000468565 CALD1Q05682 793 aaKnown RBP18.83■□□□□ 0.6
COL27A1-203ENST00000468565 CNBD1Q8NA66 436 aa18.83■□□□□ 0.6
COL27A1-203ENST00000468565 BRIP1Q9BX63 1249 aa18.83■□□□□ 0.6
COL27A1-203ENST00000468565 LAS1LQ9Y4W2 734 aaKnown RBP18.83■□□□□ 0.6
COL27A1-203ENST00000468565 MAP3K15Q6ZN16 1313 aa18.83■□□□□ 0.6
COL27A1-203ENST00000468565 ARFGEF2Q9Y6D5 1785 aa18.83■□□□□ 0.6
COL27A1-203ENST00000468565 ADCY9O60503 1353 aa18.82■□□□□ 0.6
COL27A1-203ENST00000468565 MYL6BP14649 208 aa18.82■□□□□ 0.6
COL27A1-203ENST00000468565 PDE6BP35913 854 aa18.82■□□□□ 0.6
COL27A1-203ENST00000468565 KIF6Q6ZMV9 814 aa18.82■□□□□ 0.6
COL27A1-203ENST00000468565 SBF1O95248 1867 aa18.82■□□□□ 0.6
COL27A1-203ENST00000468565 CACNA1SQ13698 1873 aa18.82■□□□□ 0.6
COL27A1-203ENST00000468565 H0YIN7 160 aa18.82■□□□□ 0.6
COL27A1-203ENST00000468565 EIF2S2P20042 333 aaKnown RBP18.82■□□□□ 0.6
COL27A1-203ENST00000468565 ST5P78524 1137 aa18.82■□□□□ 0.6
COL27A1-203ENST00000468565 PDIA6Q15084 440 aa18.82■□□□□ 0.6
COL27A1-203ENST00000468565 HLFQ16534 295 aa18.82■□□□□ 0.6
COL27A1-203ENST00000468565 C2CD5Q86YS7 1000 aa18.82■□□□□ 0.6
COL27A1-203ENST00000468565 NGEFQ8N5V2 710 aa18.82■□□□□ 0.6
COL27A1-203ENST00000468565 ANKRD36CQ5JPF3 1778 aa18.82■□□□□ 0.6
COL27A1-203ENST00000468565 HOXB7P09629 217 aa18.81■□□□□ 0.6
COL27A1-203ENST00000468565 ZNF853P0CG23 659 aa18.81■□□□□ 0.6
COL27A1-203ENST00000468565 LRP10Q7Z4F1 713 aa18.81■□□□□ 0.6
COL27A1-203ENST00000468565 IFT57Q9NWB7 429 aa18.81■□□□□ 0.6
COL27A1-203ENST00000468565 NIP7Q9Y221 180 aaKnown RBP eCLIP18.81■□□□□ 0.6
COL27A1-203ENST00000468565 ATP10DQ9P241 1426 aa18.81■□□□□ 0.6
COL27A1-203ENST00000468565 NPHP1O15259 732 aa18.8■□□□□ 0.6
COL27A1-203ENST00000468565 TTLL7Q6ZT98 887 aa18.8■□□□□ 0.6
COL27A1-203ENST00000468565 NBPF5PQ86XG9 351 aaPredicted RBP18.8■□□□□ 0.6
COL27A1-203ENST00000468565 GNAI1P63096 354 aa18.8■□□□□ 0.6
COL27A1-203ENST00000468565 ARHGAP27Q6ZUM4 889 aa18.8■□□□□ 0.6
COL27A1-203ENST00000468565 MBIPQ9NS73 344 aa18.79■□□□□ 0.6
COL27A1-203ENST00000468565 KRT24Q2M2I5 525 aa18.78■□□□□ 0.6
COL27A1-203ENST00000468565 TPTE2Q6XPS3 522 aa18.78■□□□□ 0.6
COL27A1-203ENST00000468565 TTLL6Q8N841 843 aa18.78■□□□□ 0.6
COL27A1-203ENST00000468565 CCDC27Q2M243 656 aa18.78■□□□□ 0.6
COL27A1-203ENST00000468565 CCDC24Q8N4L8 307 aa18.78■□□□□ 0.6
COL27A1-203ENST00000468565 PROSER3Q2NL68 480 aa18.77■□□□□ 0.6
COL27A1-203ENST00000468565 DDX21Q9NR30 783 aaKnown RBP eCLIP18.77■□□□□ 0.6
COL27A1-203ENST00000468565 IBTKQ9P2D0 1353 aaPredicted RBP18.77■□□□□ 0.6
COL27A1-203ENST00000468565 CCDC88AQ3V6T2 1871 aa18.77■□□□□ 0.59
COL27A1-203ENST00000468565 GIGYF2Q6Y7W6 1299 aaKnown RBP18.76■□□□□ 0.59
COL27A1-203ENST00000468565 ZBTB3Q9H5J0 574 aa18.76■□□□□ 0.59
COL27A1-203ENST00000468565 SLX4Q8IY92 1834 aa18.76■□□□□ 0.59
COL27A1-203ENST00000468565 FER1L6Q2WGJ9 1857 aa18.75■□□□□ 0.59
COL27A1-203ENST00000468565 HDGFL1Q5TGJ6 251 aa18.75■□□□□ 0.59
COL27A1-203ENST00000468565 NECTIN2Q92692 538 aa18.75■□□□□ 0.59
COL27A1-203ENST00000468565 NYXQ9GZU5 481 aa18.75■□□□□ 0.59
COL27A1-203ENST00000468565 TNRC6CQ9HCJ0 1690 aaKnown RBP18.74■□□□□ 0.59
COL27A1-203ENST00000468565 ANXA1P04083 346 aa18.74■□□□□ 0.59
COL27A1-203ENST00000468565 SRGNP10124 158 aa18.74■□□□□ 0.59
COL27A1-203ENST00000468565 DUSP27Q5VZP5 1158 aa18.74■□□□□ 0.59
COL27A1-203ENST00000468565 STYK1Q6J9G0 422 aa18.74■□□□□ 0.59
COL27A1-203ENST00000468565 ZNF34Q8IZ26 560 aa18.74■□□□□ 0.59
COL27A1-203ENST00000468565 KLRG2A4D1S0 409 aaPredicted RBP18.74■□□□□ 0.59
COL27A1-203ENST00000468565 ZNF622Q969S3 477 aaKnown RBP eCLIP18.74■□□□□ 0.59
COL27A1-203ENST00000468565 RIC1Q4ADV7 1423 aa18.73■□□□□ 0.59
COL27A1-203ENST00000468565 UBN2Q6ZU65 1347 aa18.73■□□□□ 0.59
COL27A1-203ENST00000468565 COPS6Q7L5N1 327 aa18.73■□□□□ 0.59
COL27A1-203ENST00000468565 CNKSR1Q969H4 720 aa18.73■□□□□ 0.59
COL27A1-203ENST00000468565 MASTLQ96GX5 879 aa18.73■□□□□ 0.59
COL27A1-203ENST00000468565 CHPF2Q9P2E5 772 aa18.73■□□□□ 0.59
COL27A1-203ENST00000468565 DBF4Q9UBU7 674 aaPredicted RBP18.73■□□□□ 0.59
COL27A1-203ENST00000468565 FAM177BA6PVY3 158 aa18.72■□□□□ 0.59
COL27A1-203ENST00000468565 WWC1Q8IX03 1113 aa18.72■□□□□ 0.59
COL27A1-203ENST00000468565 XAGE3Q8WTP9 111 aa18.72■□□□□ 0.59
COL27A1-203ENST00000468565 DICER1Q9UPY3 1922 aaKnown RBP18.72■□□□□ 0.59
COL27A1-203ENST00000468565 PARP10Q53GL7 1025 aa18.72■□□□□ 0.59
COL27A1-203ENST00000468565 GPTP24298 496 aa18.71■□□□□ 0.59
COL27A1-203ENST00000468565 GTF2E1P29083 439 aaPredicted RBP18.71■□□□□ 0.59
COL27A1-203ENST00000468565 HSP90AB3PQ58FF7 597 aa18.71■□□□□ 0.59
COL27A1-203ENST00000468565 ABCC12Q96J65 1359 aa18.7■□□□□ 0.58
COL27A1-203ENST00000468565 IL16Q14005 1332 aa18.7■□□□□ 0.58
COL27A1-203ENST00000468565 NPR1P16066 1061 aa18.7■□□□□ 0.58
COL27A1-203ENST00000468565 AIMP1Q12904 312 aaKnown RBP18.7■□□□□ 0.58
COL27A1-203ENST00000468565 SUSD4Q5VX71 490 aa18.7■□□□□ 0.58
COL27A1-203ENST00000468565 C9orf131Q5VYM1 1079 aa18.7■□□□□ 0.58
COL27A1-203ENST00000468565 HYPKQ9NX55 129 aa18.7■□□□□ 0.58
COL27A1-203ENST00000468565 NTSR2O95665 410 aa18.69■□□□□ 0.58
COL27A1-203ENST00000468565 PPP1R42Q7Z4L9 355 aa18.69■□□□□ 0.58
COL27A1-203ENST00000468565 TIAM2Q8IVF5 1701 aa18.69■□□□□ 0.58
COL27A1-203ENST00000468565 CHMP4AQ9BY43 222 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms