RNA–Protein interactions for RNA: ENST00000468480.5

RNF6-204, Transcript of ring finger protein 6, humanhuman

TSL 1 (best)

Gene RNF6, Length 1,105 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6-204ENST00000468480 RC3H1Q5TC82 1133 aaKnown RBP21.04■□□□□ 0.96
RNF6-204ENST00000468480 SSH1Q8WYL5 1049 aa21.04■□□□□ 0.96
RNF6-204ENST00000468480 ARHGAP45Q92619 1136 aa21.04■□□□□ 0.96
RNF6-204ENST00000468480 CLUAP1Q96AJ1 413 aa21.04■□□□□ 0.96
RNF6-204ENST00000468480 DLEC1Q9Y238 1755 aa21.04■□□□□ 0.96
RNF6-204ENST00000468480 SOS1Q07889 1333 aaPredicted RBP21.04■□□□□ 0.96
RNF6-204ENST00000468480 GNAT3A8MTJ3 354 aa21.03■□□□□ 0.96
RNF6-204ENST00000468480 CHL1O00533 1208 aa21.03■□□□□ 0.96
RNF6-204ENST00000468480 RPS6KA4O75676 772 aa21.03■□□□□ 0.96
RNF6-204ENST00000468480 MTHFSDQ2M296 383 aaKnown RBP21.03■□□□□ 0.96
RNF6-204ENST00000468480 ATF7IPQ6VMQ6 1270 aa21.03■□□□□ 0.96
RNF6-204ENST00000468480 RBM42Q9BTD8 480 aaKnown RBP21.03■□□□□ 0.96
RNF6-204ENST00000468480 PIM2Q9P1W9 311 aa21.03■□□□□ 0.96
RNF6-204ENST00000468480 RFC4P35249 363 aa21.02■□□□□ 0.96
RNF6-204ENST00000468480 DDR1Q08345 913 aa21.02■□□□□ 0.96
RNF6-204ENST00000468480 TWISTNBQ3B726 338 aaPredicted RBP21.02■□□□□ 0.96
RNF6-204ENST00000468480 AMOTQ4VCS5 1084 aa21.02■□□□□ 0.96
RNF6-204ENST00000468480 CHMP4AQ9BY43 222 aa21.02■□□□□ 0.96
RNF6-204ENST00000468480 CHRNA5P30532 468 aa21.01■□□□□ 0.95
RNF6-204ENST00000468480 MVPQ14764 893 aaKnown RBP21.01■□□□□ 0.95
RNF6-204ENST00000468480 DALRD3Q5D0E6 543 aaKnown RBP21.01■□□□□ 0.95
RNF6-204ENST00000468480 THUMPD2Q9BTF0 503 aaKnown RBP21.01■□□□□ 0.95
RNF6-204ENST00000468480 BCL2L13Q9BXK5 485 aa21.01■□□□□ 0.95
RNF6-204ENST00000468480 SRP68Q9UHB9 627 aaKnown RBP21.01■□□□□ 0.95
RNF6-204ENST00000468480 DDX19BQ9UMR2 479 aa21.01■□□□□ 0.95
RNF6-204ENST00000468480 COG6Q9Y2V7 657 aa21.01■□□□□ 0.95
RNF6-204ENST00000468480 VAMP4O75379 141 aa21■□□□□ 0.95
RNF6-204ENST00000468480 PLEKHO1Q53GL0 409 aaPredicted RBP21■□□□□ 0.95
RNF6-204ENST00000468480 PANK1Q8TE04 598 aa21■□□□□ 0.95
RNF6-204ENST00000468480 KDM6AO15550 1401 aaPredicted RBP21■□□□□ 0.95
RNF6-204ENST00000468480 HSPA1AP0DMV8 641 aaKnown RBP20.99■□□□□ 0.95
RNF6-204ENST00000468480 HSPA1BP0DMV9 641 aaKnown RBP20.99■□□□□ 0.95
RNF6-204ENST00000468480 SMC1BQ8NDV3 1235 aa20.99■□□□□ 0.95
RNF6-204ENST00000468480 NRXN2Q9P2S2 1712 aa20.98■□□□□ 0.95
RNF6-204ENST00000468480 API5Q9BZZ5 524 aaKnown RBP20.98■□□□□ 0.95
RNF6-204ENST00000468480 VIRMAQ69YN4 1812 aaKnown RBP20.98■□□□□ 0.95
RNF6-204ENST00000468480 RASSF7Q02833 373 aa20.97■□□□□ 0.95
RNF6-204ENST00000468480 MCM10Q7L590 875 aa20.97■□□□□ 0.95
RNF6-204ENST00000468480 NOB1Q9ULX3 412 aaKnown RBP20.97■□□□□ 0.95
RNF6-204ENST00000468480 DICER1Q9UPY3 1922 aaKnown RBP20.96■□□□□ 0.95
RNF6-204ENST00000468480 SCN11AQ9UI33 1791 aa20.96■□□□□ 0.95
RNF6-204ENST00000468480 ERVV-2B6SEH9 535 aa20.96■□□□□ 0.95
RNF6-204ENST00000468480 DCTN1Q14203 1278 aa20.96■□□□□ 0.95
RNF6-204ENST00000468480 TSPYL4Q9UJ04 414 aa20.96■□□□□ 0.95
RNF6-204ENST00000468480 USP42Q9H9J4 1324 aaKnown RBP20.96■□□□□ 0.95
RNF6-204ENST00000468480 TRIM27P14373 513 aa20.95■□□□□ 0.94
RNF6-204ENST00000468480 MRPL50Q8N5N7 158 aaKnown RBP20.95■□□□□ 0.94
RNF6-204ENST00000468480 RWDD1Q9H446 243 aaPredicted RBP20.95■□□□□ 0.94
RNF6-204ENST00000468480 CRKLP46109 303 aaKnown RBP20.94■□□□□ 0.94
RNF6-204ENST00000468480 POLRMTO00411 1230 aaKnown RBP20.93■□□□□ 0.94
RNF6-204ENST00000468480 PTCD1O75127 700 aaKnown RBP20.92■□□□□ 0.94
RNF6-204ENST00000468480 AKAP4Q5JQC9 854 aa20.92■□□□□ 0.94
RNF6-204ENST00000468480 C1orf141Q5JVX7 400 aa20.92■□□□□ 0.94
RNF6-204ENST00000468480 ITPRIPQ8IWB1 547 aa20.92■□□□□ 0.94
RNF6-204ENST00000468480 TM4SF1P30408 202 aa20.91■□□□□ 0.94
RNF6-204ENST00000468480 TAF7Q15545 349 aaPredicted RBP20.91■□□□□ 0.94
RNF6-204ENST00000468480 C8orf58Q8NAV2 365 aa20.91■□□□□ 0.94
RNF6-204ENST00000468480 ZC3H4Q9UPT8 1303 aaKnown RBP20.91■□□□□ 0.94
RNF6-204ENST00000468480 ANKRD31Q8N7Z5 1873 aa20.9■□□□□ 0.94
RNF6-204ENST00000468480 PTPRCP08575 1304 aa20.9■□□□□ 0.94
RNF6-204ENST00000468480 GLTPD2A6NH11 291 aa20.9■□□□□ 0.94
RNF6-204ENST00000468480 RLBP1P12271 317 aa20.9■□□□□ 0.94
RNF6-204ENST00000468480 POTECB2RU33 542 aa20.89■□□□□ 0.93
RNF6-204ENST00000468480 VEGFAP15692 232 aaPredicted RBP20.89■□□□□ 0.93
RNF6-204ENST00000468480 TSPYL6Q8N831 410 aa20.89■□□□□ 0.93
RNF6-204ENST00000468480 RBM19Q9Y4C8 960 aaKnown RBP20.89■□□□□ 0.93
RNF6-204ENST00000468480 FER1L6Q2WGJ9 1857 aa20.89■□□□□ 0.93
RNF6-204ENST00000468480 CABP4P57796 275 aa20.88■□□□□ 0.93
RNF6-204ENST00000468480 ZNF530Q6P9A1 599 aaPredicted RBP20.88■□□□□ 0.93
RNF6-204ENST00000468480 INTS5Q6P9B9 1019 aaKnown RBP20.88■□□□□ 0.93
RNF6-204ENST00000468480 HSP90AB1P08238 724 aaKnown RBP20.87■□□□□ 0.93
RNF6-204ENST00000468480 LMNB1P20700 586 aa20.87■□□□□ 0.93
RNF6-204ENST00000468480 STK31Q9BXU1 1019 aa20.87■□□□□ 0.93
RNF6-204ENST00000468480 CACNA1SQ13698 1873 aa20.87■□□□□ 0.93
RNF6-204ENST00000468480 CEMIPQ8WUJ3 1361 aa20.86■□□□□ 0.93
RNF6-204ENST00000468480 ELL2O00472 640 aaPredicted RBP20.86■□□□□ 0.93
RNF6-204ENST00000468480 TEFQ10587 303 aa20.86■□□□□ 0.93
RNF6-204ENST00000468480 COL11A2P13942 1736 aaPredicted RBP20.86■□□□□ 0.93
RNF6-204ENST00000468480 ABCC4O15439 1325 aa20.85■□□□□ 0.93
RNF6-204ENST00000468480 HOXB7P09629 217 aa20.85■□□□□ 0.93
RNF6-204ENST00000468480 CCDC30Q5VVM6 783 aa20.85■□□□□ 0.93
RNF6-204ENST00000468480 USPL1Q5W0Q7 1092 aa20.85■□□□□ 0.93
RNF6-204ENST00000468480 TMEM57Q8N5G2 664 aa20.85■□□□□ 0.93
RNF6-204ENST00000468480 NFATC2IPQ8NCF5 419 aa20.85■□□□□ 0.93
RNF6-204ENST00000468480 NFKBIEO00221 500 aa20.84■□□□□ 0.93
RNF6-204ENST00000468480 HDAC1Q13547 482 aaPredicted RBP20.83■□□□□ 0.93
RNF6-204ENST00000468480 NFIXQ14938 502 aa20.83■□□□□ 0.93
RNF6-204ENST00000468480 IL17REQ8NFR9 667 aa20.83■□□□□ 0.93
RNF6-204ENST00000468480 CARMIL3Q8ND23 1372 aa20.83■□□□□ 0.92
RNF6-204ENST00000468480 TNNQ9UQP3 1299 aa20.82■□□□□ 0.92
RNF6-204ENST00000468480 DNAJC10Q8IXB1 793 aa20.81■□□□□ 0.92
RNF6-204ENST00000468480 ZBTB40Q9NUA8 1239 aa20.81■□□□□ 0.92
RNF6-204ENST00000468480 BCL2L12Q9HB09 334 aa20.8■□□□□ 0.92
RNF6-204ENST00000468480 ZPR1O75312 459 aa20.79■□□□□ 0.92
RNF6-204ENST00000468480 MKRN1Q9UHC7 482 aaKnown RBP20.79■□□□□ 0.92
RNF6-204ENST00000468480 UBR2Q8IWV8 1755 aa20.79■□□□□ 0.92
RNF6-204ENST00000468480 RNMTO43148 476 aaKnown RBP20.78■□□□□ 0.92
RNF6-204ENST00000468480 POTEIP0CG38 1075 aa20.78■□□□□ 0.92
RNF6-204ENST00000468480 POTEJP0CG39 1038 aa20.78■□□□□ 0.92
RNF6-204ENST00000468480 INTS3Q68E01 1043 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms