RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 MBIPQ9NS73 344 aa4.72□□□□□ -1.65
COMMD3-207ENST00000468469 PPP1R1BQ9UD71 204 aaPredicted RBP4.72□□□□□ -1.65
COMMD3-207ENST00000468469 ZNF330Q9Y3S2 320 aaPredicted RBP4.72□□□□□ -1.65
COMMD3-207ENST00000468469 SALL2Q9Y467 1007 aaPredicted RBP4.72□□□□□ -1.65
COMMD3-207ENST00000468469 COL24A1Q17RW2 1714 aa4.72□□□□□ -1.65
COMMD3-207ENST00000468469 A0A087WZG4 1122 aa4.71□□□□□ -1.66
COMMD3-207ENST00000468469 CHL1O00533 1208 aa4.71□□□□□ -1.66
COMMD3-207ENST00000468469 GIGYF1O75420 1035 aaPredicted RBP4.71□□□□□ -1.66
COMMD3-207ENST00000468469 CANXP27824 592 aaKnown RBP4.71□□□□□ -1.66
COMMD3-207ENST00000468469 POLD1P28340 1107 aa4.71□□□□□ -1.66
COMMD3-207ENST00000468469 RFC4P35249 363 aa4.71□□□□□ -1.66
COMMD3-207ENST00000468469 PIP4K2AP48426 406 aaPredicted RBP4.71□□□□□ -1.66
COMMD3-207ENST00000468469 GNAI1P63096 354 aa4.71□□□□□ -1.66
COMMD3-207ENST00000468469 TRAPPC3LQ5T215 181 aa4.71□□□□□ -1.66
COMMD3-207ENST00000468469 NPM2Q86SE8 214 aaKnown RBP4.71□□□□□ -1.66
COMMD3-207ENST00000468469 NGEFQ8N5V2 710 aa4.71□□□□□ -1.66
COMMD3-207ENST00000468469 IL16Q14005 1332 aa4.71□□□□□ -1.66
COMMD3-207ENST00000468469 ERBB4Q15303 1308 aa4.71□□□□□ -1.66
COMMD3-207ENST00000468469 FANCIQ9NVI1 1328 aa4.71□□□□□ -1.66
COMMD3-207ENST00000468469 ZPR1O75312 459 aa4.7□□□□□ -1.66
COMMD3-207ENST00000468469 A1BGP04217 495 aa4.7□□□□□ -1.66
COMMD3-207ENST00000468469 HOXB7P09629 217 aa4.7□□□□□ -1.66
COMMD3-207ENST00000468469 ZNF853P0CG23 659 aa4.7□□□□□ -1.66
COMMD3-207ENST00000468469 IL6STP40189 918 aaPredicted RBP4.7□□□□□ -1.66
COMMD3-207ENST00000468469 PTGER2P43116 358 aa4.7□□□□□ -1.66
COMMD3-207ENST00000468469 KRT24Q2M2I5 525 aa4.7□□□□□ -1.66
COMMD3-207ENST00000468469 HDGFL1Q5TGJ6 251 aa4.7□□□□□ -1.66
COMMD3-207ENST00000468469 USPL1Q5W0Q7 1092 aa4.7□□□□□ -1.66
COMMD3-207ENST00000468469 DZIP3Q86Y13 1208 aaKnown RBP4.7□□□□□ -1.66
COMMD3-207ENST00000468469 KLHL34Q8N239 644 aa4.7□□□□□ -1.66
COMMD3-207ENST00000468469 ARHGEF1Q92888 912 aaKnown RBP4.7□□□□□ -1.66
COMMD3-207ENST00000468469 TSR2Q969E8 191 aaKnown RBP4.7□□□□□ -1.66
COMMD3-207ENST00000468469 ARXQ96QS3 562 aa4.7□□□□□ -1.66
COMMD3-207ENST00000468469 SGIP1Q9BQI5 828 aa4.7□□□□□ -1.66
COMMD3-207ENST00000468469 BMP2KQ9NSY1 1161 aaPredicted RBP4.7□□□□□ -1.66
COMMD3-207ENST00000468469 SRP68Q9UHB9 627 aaKnown RBP4.7□□□□□ -1.66
COMMD3-207ENST00000468469 USP16Q9Y5T5 823 aa4.7□□□□□ -1.66
COMMD3-207ENST00000468469 C10orf71Q711Q0 1435 aa4.7□□□□□ -1.66
COMMD3-207ENST00000468469 ZNF521Q96K83 1311 aa4.7□□□□□ -1.66
COMMD3-207ENST00000468469 NBPF26B4DH59 902 aa4.69□□□□□ -1.66
COMMD3-207ENST00000468469 ST18O60284 1047 aa4.69□□□□□ -1.66
COMMD3-207ENST00000468469 MMP10P09238 476 aa4.69□□□□□ -1.66
COMMD3-207ENST00000468469 GYS1P13807 737 aa4.69□□□□□ -1.66
COMMD3-207ENST00000468469 MYL6BP14649 208 aa4.69□□□□□ -1.66
COMMD3-207ENST00000468469 EIF2S2P20042 333 aaKnown RBP4.69□□□□□ -1.66
COMMD3-207ENST00000468469 EIF5P55010 431 aaKnown RBP4.69□□□□□ -1.66
COMMD3-207ENST00000468469 DUSP27Q5VZP5 1158 aa4.69□□□□□ -1.66
COMMD3-207ENST00000468469 NBPF10Q6P3W6 841 aaKnown RBP4.69□□□□□ -1.66
COMMD3-207ENST00000468469 KIF6Q6ZMV9 814 aa4.69□□□□□ -1.66
COMMD3-207ENST00000468469 SPNS2Q8IVW8 549 aa4.69□□□□□ -1.66
COMMD3-207ENST00000468469 WDR63Q8IWG1 891 aa4.69□□□□□ -1.66
COMMD3-207ENST00000468469 NBPF15Q8N660 670 aa4.69□□□□□ -1.66
COMMD3-207ENST00000468469 NECTIN2Q92692 538 aa4.69□□□□□ -1.66
COMMD3-207ENST00000468469 MYH16Q9H6N6 1097 aa4.69□□□□□ -1.66
COMMD3-207ENST00000468469 NARFQ9UHQ1 456 aa4.69□□□□□ -1.66
COMMD3-207ENST00000468469 COLQQ9Y215 455 aaPredicted RBP4.69□□□□□ -1.66
COMMD3-207ENST00000468469 KAT6BQ8WYB5 2073 aa4.69□□□□□ -1.66
COMMD3-207ENST00000468469 MYH14Q7Z406 1995 aaKnown RBP4.69□□□□□ -1.66
COMMD3-207ENST00000468469 CARMIL3Q8ND23 1372 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 E9PSI1 815 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 ELL2O00472 640 aaPredicted RBP4.68□□□□□ -1.66
COMMD3-207ENST00000468469 CAMTA2O94983 1202 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 HNRNPUQ00839 825 aaKnown RBP eCLIP4.68□□□□□ -1.66
COMMD3-207ENST00000468469 DDR1Q08345 913 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 GOLGA2Q08379 1002 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 FKBP8Q14318 412 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 PROSER3Q2NL68 480 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 TWISTNBQ3B726 338 aaPredicted RBP4.68□□□□□ -1.66
COMMD3-207ENST00000468469 BICDL1Q6ZP65 573 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 NLGN1Q8N2Q7 840 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 FHDC1Q9C0D6 1143 aaPredicted RBP4.68□□□□□ -1.66
COMMD3-207ENST00000468469 CHPF2Q9P2E5 772 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 TBC1D2BQ9UPU7 963 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 TRPC6Q9Y210 931 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 ZNF652Q9Y2D9 606 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 ATP10DQ9P241 1426 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 MAP3K15Q6ZN16 1313 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 PXDNLA1KZ92 1463 aa4.68□□□□□ -1.66
COMMD3-207ENST00000468469 NRXN2Q9P2S2 1712 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 POLRMTO00411 1230 aaKnown RBP4.67□□□□□ -1.66
COMMD3-207ENST00000468469 RGL2O15211 777 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 ANXA1P04083 346 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 EXOSC9Q06265 439 aaKnown RBP4.67□□□□□ -1.66
COMMD3-207ENST00000468469 NFIXQ14938 502 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 PDIA6Q15084 440 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 CCDC30Q5VVM6 783 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 TBC1D9BQ66K14 1250 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 LRP10Q7Z4F1 713 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 TSPYL6Q8N831 410 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 C8orf58Q8NAV2 365 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 STK31Q9BXU1 1019 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 CHMP4AQ9BY43 222 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 ZBTB3Q9H5J0 574 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 BCL2L12Q9HB09 334 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 DDX21Q9NR30 783 aaKnown RBP eCLIP4.67□□□□□ -1.66
COMMD3-207ENST00000468469 DBF4Q9UBU7 674 aaPredicted RBP4.67□□□□□ -1.66
COMMD3-207ENST00000468469 PARP3Q9Y6F1 533 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 ARFGEF2Q9Y6D5 1785 aa4.67□□□□□ -1.66
COMMD3-207ENST00000468469 IBTKQ9P2D0 1353 aaPredicted RBP4.66□□□□□ -1.66
COMMD3-207ENST00000468469 KIAA1551Q9HCM1 1747 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms