RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 HSP90AB1P08238 724 aaKnown RBP16.45■□□□□ 0.22
VPS26A-204ENST00000467852 BRIP1Q9BX63 1249 aa16.45■□□□□ 0.22
VPS26A-204ENST00000467852 TONSLQ96HA7 1378 aa16.45■□□□□ 0.22
VPS26A-204ENST00000467852 ANKRD31Q8N7Z5 1873 aa16.44■□□□□ 0.22
VPS26A-204ENST00000467852 LMOD1P29536 600 aaPredicted RBP16.44■□□□□ 0.22
VPS26A-204ENST00000467852 GPC2Q8N158 579 aa16.44■□□□□ 0.22
VPS26A-204ENST00000467852 TRAF5O00463 557 aa16.43■□□□□ 0.22
VPS26A-204ENST00000467852 PRPF40BQ6NWY9 871 aaKnown RBP16.43■□□□□ 0.22
VPS26A-204ENST00000467852 NCAPD2Q15021 1401 aa16.43■□□□□ 0.22
VPS26A-204ENST00000467852 SOS1Q07889 1333 aaPredicted RBP16.43■□□□□ 0.22
VPS26A-204ENST00000467852 NOGQ13253 232 aa16.42■□□□□ 0.22
VPS26A-204ENST00000467852 CTU1Q7Z7A3 348 aaKnown RBP16.42■□□□□ 0.22
VPS26A-204ENST00000467852 PUS7Q96PZ0 661 aaKnown RBP16.42■□□□□ 0.22
VPS26A-204ENST00000467852 GGNBP2Q9H3C7 697 aa16.42■□□□□ 0.22
VPS26A-204ENST00000467852 ABCB7O75027 752 aa16.41■□□□□ 0.22
VPS26A-204ENST00000467852 CELF2O95319 508 aaKnown RBP16.41■□□□□ 0.22
VPS26A-204ENST00000467852 CCDC93Q567U6 631 aa16.41■□□□□ 0.22
VPS26A-204ENST00000467852 AKAP4Q5JQC9 854 aa16.41■□□□□ 0.22
VPS26A-204ENST00000467852 STYK1Q6J9G0 422 aa16.41■□□□□ 0.22
VPS26A-204ENST00000467852 BCL2L12Q9HB09 334 aa16.41■□□□□ 0.22
VPS26A-204ENST00000467852 SAGE1Q9NXZ1 904 aa16.41■□□□□ 0.22
VPS26A-204ENST00000467852 TJP1Q07157 1748 aa16.41■□□□□ 0.22
VPS26A-204ENST00000467852 COL11A2P13942 1736 aaPredicted RBP16.4■□□□□ 0.22
VPS26A-204ENST00000467852 FZD9O00144 591 aa16.4■□□□□ 0.22
VPS26A-204ENST00000467852 FKBP4Q02790 459 aaKnown RBP eCLIP16.4■□□□□ 0.22
VPS26A-204ENST00000467852 SLC17A8Q8NDX2 589 aa16.4■□□□□ 0.22
VPS26A-204ENST00000467852 ZNF277Q9NRM2 450 aaPredicted RBP16.4■□□□□ 0.22
VPS26A-204ENST00000467852 HPS5Q9UPZ3 1129 aa16.4■□□□□ 0.22
VPS26A-204ENST00000467852 FYB1O15117 783 aa16.39■□□□□ 0.21
VPS26A-204ENST00000467852 USP50Q70EL3 339 aaPredicted RBP16.39■□□□□ 0.21
VPS26A-204ENST00000467852 AKAP11Q9UKA4 1901 aa16.39■□□□□ 0.21
VPS26A-204ENST00000467852 COL15A1P39059 1388 aa16.38■□□□□ 0.21
VPS26A-204ENST00000467852 ARFGEF2Q9Y6D5 1785 aa16.38■□□□□ 0.21
VPS26A-204ENST00000467852 MASTLQ96GX5 879 aa16.38■□□□□ 0.21
VPS26A-204ENST00000467852 EYA1Q99502 592 aa16.38■□□□□ 0.21
VPS26A-204ENST00000467852 GJA3Q9Y6H8 435 aa16.38■□□□□ 0.21
VPS26A-204ENST00000467852 NPHP1O15259 732 aa16.37■□□□□ 0.21
VPS26A-204ENST00000467852 CCDC24Q8N4L8 307 aa16.37■□□□□ 0.21
VPS26A-204ENST00000467852 PPM1GO15355 546 aaPredicted RBP16.36■□□□□ 0.21
VPS26A-204ENST00000467852 SRGNP10124 158 aa16.36■□□□□ 0.21
VPS26A-204ENST00000467852 EIF6P56537 245 aaKnown RBP16.36■□□□□ 0.21
VPS26A-204ENST00000467852 PKN2Q16513 984 aaKnown RBP16.36■□□□□ 0.21
VPS26A-204ENST00000467852 PRR5LQ6MZQ0 368 aa16.36■□□□□ 0.21
VPS26A-204ENST00000467852 DNAJC10Q8IXB1 793 aa16.36■□□□□ 0.21
VPS26A-204ENST00000467852 JDP2Q8WYK2 163 aa16.36■□□□□ 0.21
VPS26A-204ENST00000467852 ZIC5Q96T25 663 aa16.36■□□□□ 0.21
VPS26A-204ENST00000467852 TRPA1O75762 1119 aa16.35■□□□□ 0.21
VPS26A-204ENST00000467852 IARSP41252 1262 aaKnown RBP16.35■□□□□ 0.21
VPS26A-204ENST00000467852 EPS15P42566 896 aa16.35■□□□□ 0.21
VPS26A-204ENST00000467852 RTKN2Q8IZC4 609 aa16.35■□□□□ 0.21
VPS26A-204ENST00000467852 NFATC2IPQ8NCF5 419 aa16.35■□□□□ 0.21
VPS26A-204ENST00000467852 L3MBTL2Q969R5 705 aa16.35■□□□□ 0.21
VPS26A-204ENST00000467852 EMILIN1Q9Y6C2 1016 aa16.35■□□□□ 0.21
VPS26A-204ENST00000467852 CUL9Q8IWT3 2517 aa16.35■□□□□ 0.21
VPS26A-204ENST00000467852 C7orf43Q8WVR3 580 aa16.34■□□□□ 0.21
VPS26A-204ENST00000467852 ZNF408Q9H9D4 720 aa16.34■□□□□ 0.21
VPS26A-204ENST00000467852 ST20-MTHFSA0A0A6YYL1 179 aa16.33■□□□□ 0.2
VPS26A-204ENST00000467852 MTHFSP49914 203 aa16.33■□□□□ 0.2
VPS26A-204ENST00000467852 RNF186Q9NXI6 227 aa16.33■□□□□ 0.2
VPS26A-204ENST00000467852 CYP19A1P11511 503 aaPredicted RBP16.32■□□□□ 0.2
VPS26A-204ENST00000467852 ST5P78524 1137 aa16.32■□□□□ 0.2
VPS26A-204ENST00000467852 PLEKHO1Q53GL0 409 aaPredicted RBP16.32■□□□□ 0.2
VPS26A-204ENST00000467852 TBC1D9BQ66K14 1250 aa16.32■□□□□ 0.2
VPS26A-204ENST00000467852 SYNE4Q8N205 404 aa16.32■□□□□ 0.2
VPS26A-204ENST00000467852 A0A0C4DFX4 3053 aa16.31■□□□□ 0.2
VPS26A-204ENST00000467852 SCNN1DP51172 638 aa16.31■□□□□ 0.2
VPS26A-204ENST00000467852 CNBD1Q8NA66 436 aa16.31■□□□□ 0.2
VPS26A-204ENST00000467852 ZBTB1Q9Y2K1 713 aa16.31■□□□□ 0.2
VPS26A-204ENST00000467852 WASHC2AQ641Q2 1341 aa16.3■□□□□ 0.2
VPS26A-204ENST00000467852 A0A087WZG4 1122 aa16.3■□□□□ 0.2
VPS26A-204ENST00000467852 HUNKP57058 714 aa16.3■□□□□ 0.2
VPS26A-204ENST00000467852 ZNF530Q6P9A1 599 aaPredicted RBP16.3■□□□□ 0.2
VPS26A-204ENST00000467852 ANKRD26Q9UPS8 1709 aa16.29■□□□□ 0.2
VPS26A-204ENST00000467852 GLIS2Q9BZE0 524 aaPredicted RBP16.29■□□□□ 0.2
VPS26A-204ENST00000467852 HDAC9Q9UKV0 1011 aa16.29■□□□□ 0.2
VPS26A-204ENST00000467852 CANXP27824 592 aaKnown RBP16.28■□□□□ 0.2
VPS26A-204ENST00000467852 KIF23Q02241 960 aaPredicted RBP16.28■□□□□ 0.2
VPS26A-204ENST00000467852 C1orf141Q5JVX7 400 aa16.28■□□□□ 0.2
VPS26A-204ENST00000467852 CCDC102AQ96A19 550 aa16.28■□□□□ 0.2
VPS26A-204ENST00000467852 SETDB2Q96T68 719 aa16.28■□□□□ 0.2
VPS26A-204ENST00000467852 ADARB2Q9NS39 739 aaKnown RBP16.28■□□□□ 0.2
VPS26A-204ENST00000467852 KIF20BQ96Q89 1820 aa16.28■□□□□ 0.2
VPS26A-204ENST00000467852 NPR1P16066 1061 aa16.27■□□□□ 0.2
VPS26A-204ENST00000467852 AMOTQ4VCS5 1084 aa16.27■□□□□ 0.2
VPS26A-204ENST00000467852 RGMBQ6NW40 437 aa16.27■□□□□ 0.2
VPS26A-204ENST00000467852 CARD11Q9BXL7 1154 aa16.27■□□□□ 0.2
VPS26A-204ENST00000467852 BCORQ6W2J9 1755 aa16.27■□□□□ 0.2
VPS26A-204ENST00000467852 MKI67P46013 3256 aaKnown RBP16.26■□□□□ 0.19
VPS26A-204ENST00000467852 COLQQ9Y215 455 aaPredicted RBP16.26■□□□□ 0.19
VPS26A-204ENST00000467852 SZT2Q5T011 3432 aa16.26■□□□□ 0.19
VPS26A-204ENST00000467852 TRIOBPQ9H2D6 2365 aa16.25■□□□□ 0.19
VPS26A-204ENST00000467852 FAM155AB1AL88 458 aaPredicted RBP16.25■□□□□ 0.19
VPS26A-204ENST00000467852 OLFM4Q6UX06 510 aa16.25■□□□□ 0.19
VPS26A-204ENST00000467852 CDC37L1Q7L3B6 337 aa16.25■□□□□ 0.19
VPS26A-204ENST00000467852 SCN11AQ9UI33 1791 aa16.25■□□□□ 0.19
VPS26A-204ENST00000467852 PSMD1Q99460 953 aa16.24■□□□□ 0.19
VPS26A-204ENST00000467852 EIF5P55010 431 aaKnown RBP16.23■□□□□ 0.19
VPS26A-204ENST00000467852 FBXO46Q6PJ61 603 aaPredicted RBP16.23■□□□□ 0.19
VPS26A-204ENST00000467852 GPRC5DQ9NZD1 345 aa16.23■□□□□ 0.19
VPS26A-204ENST00000467852 PGAP2Q9UHJ9 254 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms