RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 CHMP4AQ9BY43 222 aa17.44■□□□□ 0.38
SEC16A-208ENST00000467838 TM6SF1Q9BZW5 370 aa17.44■□□□□ 0.38
SEC16A-208ENST00000467838 STRCQ7RTU9 1775 aa17.43■□□□□ 0.38
SEC16A-208ENST00000467838 SRGAP3O43295 1099 aa17.43■□□□□ 0.38
SEC16A-208ENST00000467838 ZMYND15Q9H091 742 aa17.43■□□□□ 0.38
SEC16A-208ENST00000467838 GLRX3O76003 335 aaKnown RBP17.42■□□□□ 0.38
SEC16A-208ENST00000467838 NFAT5O94916 1531 aa17.42■□□□□ 0.38
SEC16A-208ENST00000467838 NLRP6P59044 892 aa17.42■□□□□ 0.38
SEC16A-208ENST00000467838 EIF4A1P60842 406 aaKnown RBP17.42■□□□□ 0.38
SEC16A-208ENST00000467838 VPS53Q5VIR6 699 aa17.42■□□□□ 0.38
SEC16A-208ENST00000467838 C14orf37Q86TY3 774 aa17.42■□□□□ 0.38
SEC16A-208ENST00000467838 HYPKQ9NX55 129 aa17.42■□□□□ 0.38
SEC16A-208ENST00000467838 NBPF7P0C2Y1 421 aaPredicted RBP17.41■□□□□ 0.38
SEC16A-208ENST00000467838 PROSER2Q86WR7 435 aaPredicted RBP17.41■□□□□ 0.38
SEC16A-208ENST00000467838 DNAAF4Q8WXU2 420 aa17.41■□□□□ 0.38
SEC16A-208ENST00000467838 SH2B1Q9NRF2 756 aaPredicted RBP17.41■□□□□ 0.38
SEC16A-208ENST00000467838 SPTLC3Q9NUV7 552 aa17.41■□□□□ 0.38
SEC16A-208ENST00000467838 SMC3Q9UQE7 1217 aa17.41■□□□□ 0.38
SEC16A-208ENST00000467838 ADCY9O60503 1353 aa17.41■□□□□ 0.38
SEC16A-208ENST00000467838 MAP4K4O95819 1239 aaPredicted RBP17.4■□□□□ 0.38
SEC16A-208ENST00000467838 RBM10P98175 930 aaKnown RBP17.4■□□□□ 0.38
SEC16A-208ENST00000467838 MYRIPQ8NFW9 859 aa17.4■□□□□ 0.38
SEC16A-208ENST00000467838 ZSCAN31Q96LW9 406 aaPredicted RBP17.4■□□□□ 0.38
SEC16A-208ENST00000467838 USP25Q9UHP3 1055 aa17.4■□□□□ 0.38
SEC16A-208ENST00000467838 STRCP1A6NGW2 1772 aa17.4■□□□□ 0.38
SEC16A-208ENST00000467838 FOXD4L6Q3SYB3 417 aaPredicted RBP17.4■□□□□ 0.38
SEC16A-208ENST00000467838 FOXD4L3Q6VB84 417 aaPredicted RBP17.4■□□□□ 0.38
SEC16A-208ENST00000467838 RUFY2Q8WXA3 655 aa17.4■□□□□ 0.38
SEC16A-208ENST00000467838 PRIMPOLQ96LW4 560 aa17.4■□□□□ 0.38
SEC16A-208ENST00000467838 FAM13BQ9NYF5 915 aa17.4■□□□□ 0.38
SEC16A-208ENST00000467838 MTMR6Q9Y217 621 aa17.4■□□□□ 0.38
SEC16A-208ENST00000467838 OVOS2A0A0G2JMS6 1433 aa17.4■□□□□ 0.38
SEC16A-208ENST00000467838 LARGE1O95461 756 aa17.39■□□□□ 0.37
SEC16A-208ENST00000467838 ADCY5O95622 1261 aa17.39■□□□□ 0.37
SEC16A-208ENST00000467838 GTF2F1P35269 517 aaKnown RBP eCLIP17.39■□□□□ 0.37
SEC16A-208ENST00000467838 ZSWIM6Q9HCJ5 1215 aa17.39■□□□□ 0.37
SEC16A-208ENST00000467838 HCLS1P14317 486 aaPredicted RBP17.39■□□□□ 0.37
SEC16A-208ENST00000467838 SNRKQ9NRH2 765 aa17.39■□□□□ 0.37
SEC16A-208ENST00000467838 KDM4AO75164 1064 aa17.38■□□□□ 0.37
SEC16A-208ENST00000467838 PDIA4P13667 645 aaKnown RBP17.38■□□□□ 0.37
SEC16A-208ENST00000467838 CASTP20810 708 aaKnown RBP17.38■□□□□ 0.37
SEC16A-208ENST00000467838 CWC27Q6UX04 472 aaKnown RBP17.38■□□□□ 0.37
SEC16A-208ENST00000467838 CHPF2Q9P2E5 772 aa17.38■□□□□ 0.37
SEC16A-208ENST00000467838 NCAPD2Q15021 1401 aa17.37■□□□□ 0.37
SEC16A-208ENST00000467838 ST3GAL1Q11201 340 aa17.37■□□□□ 0.37
SEC16A-208ENST00000467838 PKNOX2Q96KN3 472 aa17.37■□□□□ 0.37
SEC16A-208ENST00000467838 DIAPH3Q9NSV4 1193 aa17.37■□□□□ 0.37
SEC16A-208ENST00000467838 PI4KAP2A4QPH2 592 aa17.37■□□□□ 0.37
SEC16A-208ENST00000467838 HMGN5P82970 282 aaKnown RBP17.37■□□□□ 0.37
SEC16A-208ENST00000467838 PI4KAP1Q8N8J0 262 aa17.37■□□□□ 0.37
SEC16A-208ENST00000467838 ECHDC1Q9NTX5 307 aa17.37■□□□□ 0.37
SEC16A-208ENST00000467838 SPG7Q9UQ90 795 aa17.37■□□□□ 0.37
SEC16A-208ENST00000467838 CCDC171Q6TFL3 1326 aa17.36■□□□□ 0.37
SEC16A-208ENST00000467838 FIBPO43427 364 aa17.36■□□□□ 0.37
SEC16A-208ENST00000467838 ALDH1L1O75891 902 aa17.36■□□□□ 0.37
SEC16A-208ENST00000467838 GJB2P29033 226 aa17.36■□□□□ 0.37
SEC16A-208ENST00000467838 ERC1Q8IUD2 1116 aa17.36■□□□□ 0.37
SEC16A-208ENST00000467838 PDRG1Q9NUG6 133 aa17.36■□□□□ 0.37
SEC16A-208ENST00000467838 MRC1P22897 1456 aa17.35■□□□□ 0.37
SEC16A-208ENST00000467838 PTH1RQ03431 593 aa17.35■□□□□ 0.37
SEC16A-208ENST00000467838 NOLC1Q14978 699 aaKnown RBP eCLIP17.35■□□□□ 0.37
SEC16A-208ENST00000467838 NECTIN1Q15223 517 aa17.35■□□□□ 0.37
SEC16A-208ENST00000467838 CYP46A1Q9Y6A2 500 aa17.35■□□□□ 0.37
SEC16A-208ENST00000467838 JCADQ9P266 1359 aa17.35■□□□□ 0.37
SEC16A-208ENST00000467838 SIPA1L3O60292 1781 aaPredicted RBP17.35■□□□□ 0.37
SEC16A-208ENST00000467838 CCDC83Q8IWF9 413 aa17.35■□□□□ 0.37
SEC16A-208ENST00000467838 CLASRPQ8N2M8 674 aaKnown RBP17.35■□□□□ 0.37
SEC16A-208ENST00000467838 GPATCH3Q96I76 525 aa17.35■□□□□ 0.37
SEC16A-208ENST00000467838 JAKMIP1Q96N16 626 aaKnown RBP17.35■□□□□ 0.37
SEC16A-208ENST00000467838 ELP1O95163 1332 aa17.34■□□□□ 0.37
SEC16A-208ENST00000467838 HEG1Q9ULI3 1381 aa17.34■□□□□ 0.37
SEC16A-208ENST00000467838 CAMTA1Q9Y6Y1 1673 aa17.34■□□□□ 0.37
SEC16A-208ENST00000467838 ADCK5Q3MIX3 580 aa17.34■□□□□ 0.37
SEC16A-208ENST00000467838 IP6K1Q92551 441 aa17.34■□□□□ 0.37
SEC16A-208ENST00000467838 EVI5LQ96CN4 794 aa17.34■□□□□ 0.37
SEC16A-208ENST00000467838 ADAMTS7Q9UKP4 1686 aa17.34■□□□□ 0.37
SEC16A-208ENST00000467838 TMEM94Q12767 1356 aa17.34■□□□□ 0.37
SEC16A-208ENST00000467838 RGPD2P0DJD1 1756 aa17.33■□□□□ 0.37
SEC16A-208ENST00000467838 TPM3P06753 285 aa17.33■□□□□ 0.37
SEC16A-208ENST00000467838 CPA1P15085 419 aa17.33■□□□□ 0.37
SEC16A-208ENST00000467838 DNM1Q05193 864 aaKnown RBP17.33■□□□□ 0.37
SEC16A-208ENST00000467838 EIF2S2P20042 333 aaKnown RBP17.33■□□□□ 0.36
SEC16A-208ENST00000467838 PRPF40BQ6NWY9 871 aaKnown RBP17.33■□□□□ 0.36
SEC16A-208ENST00000467838 ALDH8A1Q9H2A2 487 aaPredicted RBP17.33■□□□□ 0.36
SEC16A-208ENST00000467838 C19orf44Q9H6X5 657 aa17.33■□□□□ 0.36
SEC16A-208ENST00000467838 HDAC5Q9UQL6 1122 aa17.33■□□□□ 0.36
SEC16A-208ENST00000467838 HIP1O00291 1037 aa17.32■□□□□ 0.36
SEC16A-208ENST00000467838 USHBP1Q8N6Y0 703 aa17.32■□□□□ 0.36
SEC16A-208ENST00000467838 TTC12Q9H892 705 aaPredicted RBP17.32■□□□□ 0.36
SEC16A-208ENST00000467838 PHF8Q9UPP1 1060 aa17.32■□□□□ 0.36
SEC16A-208ENST00000467838 UTYO14607 1347 aa17.32■□□□□ 0.36
SEC16A-208ENST00000467838 ME3Q16798 604 aa17.31■□□□□ 0.36
SEC16A-208ENST00000467838 GIMAP6Q6P9H5 292 aa17.31■□□□□ 0.36
SEC16A-208ENST00000467838 ABTB2Q8N961 1025 aa17.31■□□□□ 0.36
SEC16A-208ENST00000467838 MAP4K1Q92918 833 aa17.31■□□□□ 0.36
SEC16A-208ENST00000467838 LARP6Q9BRS8 491 aaKnown RBP17.31■□□□□ 0.36
SEC16A-208ENST00000467838 LGR6Q9HBX8 967 aa17.31■□□□□ 0.36
SEC16A-208ENST00000467838 DBF4Q9UBU7 674 aaPredicted RBP17.31■□□□□ 0.36
SEC16A-208ENST00000467838 OS9Q13438 667 aaPredicted RBP17.31■□□□□ 0.36
SEC16A-208ENST00000467838 ESCO1Q5FWF5 840 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms