RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 TTLL7Q6ZT98 887 aa33.7■■■□□ 2.99
PDCD4-205ENST00000467574 RGL2O15211 777 aa33.69■■■□□ 2.98
PDCD4-205ENST00000467574 N4BP2Q86UW6 1770 aaPredicted RBP33.68■■■□□ 2.98
PDCD4-205ENST00000467574 TSPYL6Q8N831 410 aa33.68■■■□□ 2.98
PDCD4-205ENST00000467574 DDX21Q9NR30 783 aaKnown RBP eCLIP33.68■■■□□ 2.98
PDCD4-205ENST00000467574 CHPF2Q9P2E5 772 aa33.68■■■□□ 2.98
PDCD4-205ENST00000467574 CLEC4GQ6UXB4 293 aa33.67■■■□□ 2.98
PDCD4-205ENST00000467574 ELL2O00472 640 aaPredicted RBP33.66■■■□□ 2.98
PDCD4-205ENST00000467574 MAP3K15Q6ZN16 1313 aa33.66■■■□□ 2.98
PDCD4-205ENST00000467574 BRCA1P38398 1863 aaKnown RBP33.65■■■□□ 2.98
PDCD4-205ENST00000467574 PXDNLA1KZ92 1463 aa33.65■■■□□ 2.98
PDCD4-205ENST00000467574 HLFQ16534 295 aa33.65■■■□□ 2.98
PDCD4-205ENST00000467574 BICDL1Q6ZP65 573 aa33.65■■■□□ 2.98
PDCD4-205ENST00000467574 ANKRD31Q8N7Z5 1873 aa33.65■■■□□ 2.98
PDCD4-205ENST00000467574 CARMIL3Q8ND23 1372 aa33.64■■■□□ 2.98
PDCD4-205ENST00000467574 ANKRD36CQ5JPF3 1778 aa33.64■■■□□ 2.98
PDCD4-205ENST00000467574 ERVV-1B6SEH8 477 aa33.63■■■□□ 2.97
PDCD4-205ENST00000467574 ZNF652Q9Y2D9 606 aa33.63■■■□□ 2.97
PDCD4-205ENST00000467574 SERPINB2P05120 415 aa33.62■■■□□ 2.97
PDCD4-205ENST00000467574 KIF6Q6ZMV9 814 aa33.62■■■□□ 2.97
PDCD4-205ENST00000467574 ATP10DQ9P241 1426 aa33.62■■■□□ 2.97
PDCD4-205ENST00000467574 DBF4Q9UBU7 674 aaPredicted RBP33.61■■■□□ 2.97
PDCD4-205ENST00000467574 XAGE3Q8WTP9 111 aa33.6■■■□□ 2.97
PDCD4-205ENST00000467574 ZBTB3Q9H5J0 574 aa33.59■■■□□ 2.97
PDCD4-205ENST00000467574 DLEC1Q9Y238 1755 aa33.58■■■□□ 2.97
PDCD4-205ENST00000467574 ARFGEF2Q9Y6D5 1785 aa33.58■■■□□ 2.97
PDCD4-205ENST00000467574 COPS6Q7L5N1 327 aa33.58■■■□□ 2.97
PDCD4-205ENST00000467574 SETDB2Q96T68 719 aa33.58■■■□□ 2.97
PDCD4-205ENST00000467574 CACNA1FO60840 1977 aa33.58■■■□□ 2.97
PDCD4-205ENST00000467574 TWISTNBQ3B726 338 aaPredicted RBP33.57■■■□□ 2.96
PDCD4-205ENST00000467574 MYH16Q9H6N6 1097 aa33.56■■■□□ 2.96
PDCD4-205ENST00000467574 GOLGA2Q08379 1002 aa33.55■■■□□ 2.96
PDCD4-205ENST00000467574 HYPKQ9NX55 129 aa33.55■■■□□ 2.96
PDCD4-205ENST00000467574 NIP7Q9Y221 180 aaKnown RBP eCLIP33.55■■■□□ 2.96
PDCD4-205ENST00000467574 COL11A2P13942 1736 aaPredicted RBP33.54■■■□□ 2.96
PDCD4-205ENST00000467574 TGFB2P61812 414 aa33.54■■■□□ 2.96
PDCD4-205ENST00000467574 EXOSC9Q06265 439 aaKnown RBP33.54■■■□□ 2.96
PDCD4-205ENST00000467574 AIMP1Q12904 312 aaKnown RBP33.54■■■□□ 2.96
PDCD4-205ENST00000467574 PRR5LQ6MZQ0 368 aa33.54■■■□□ 2.96
PDCD4-205ENST00000467574 GIGYF2Q6Y7W6 1299 aaKnown RBP33.54■■■□□ 2.96
PDCD4-205ENST00000467574 CCDC30Q5VVM6 783 aa33.53■■■□□ 2.96
PDCD4-205ENST00000467574 UBN2Q6ZU65 1347 aa33.52■■■□□ 2.96
PDCD4-205ENST00000467574 DPEP1P16444 411 aa33.5■■■□□ 2.95
PDCD4-205ENST00000467574 ZNF34Q8IZ26 560 aa33.5■■■□□ 2.95
PDCD4-205ENST00000467574 CNBD1Q8NA66 436 aa33.5■■■□□ 2.95
PDCD4-205ENST00000467574 A0A0G2JLW4 131 aa33.49■■■□□ 2.95
PDCD4-205ENST00000467574 VAMP4O75379 141 aa33.49■■■□□ 2.95
PDCD4-205ENST00000467574 YBX3P16989 372 aaKnown RBP eCLIP33.49■■■□□ 2.95
PDCD4-205ENST00000467574 KCNA3P22001 575 aa33.49■■■□□ 2.95
PDCD4-205ENST00000467574 CHMP4AQ9BY43 222 aa33.49■■■□□ 2.95
PDCD4-205ENST00000467574 PHAXQ9H814 394 aaKnown RBP33.49■■■□□ 2.95
PDCD4-205ENST00000467574 E9PSI1 815 aa33.48■■■□□ 2.95
PDCD4-205ENST00000467574 NBPF5PQ86XG9 351 aaPredicted RBP33.48■■■□□ 2.95
PDCD4-205ENST00000467574 CCDC24Q8N4L8 307 aa33.48■■■□□ 2.95
PDCD4-205ENST00000467574 IBTKQ9P2D0 1353 aaPredicted RBP33.47■■■□□ 2.95
PDCD4-205ENST00000467574 ARFGEF1Q9Y6D6 1849 aa33.47■■■□□ 2.95
PDCD4-205ENST00000467574 GPTP24298 496 aa33.47■■■□□ 2.95
PDCD4-205ENST00000467574 SLFN5Q08AF3 891 aa33.47■■■□□ 2.95
PDCD4-205ENST00000467574 PLBD2Q8NHP8 589 aa33.47■■■□□ 2.95
PDCD4-205ENST00000467574 TNRC6CQ9HCJ0 1690 aaKnown RBP33.47■■■□□ 2.95
PDCD4-205ENST00000467574 TCERG1O14776 1098 aaKnown RBP33.46■■■□□ 2.95
PDCD4-205ENST00000467574 CDCA7LQ96GN5 454 aa33.46■■■□□ 2.95
PDCD4-205ENST00000467574 CHRNA5P30532 468 aa33.45■■■□□ 2.95
PDCD4-205ENST00000467574 ANKRD13DQ6ZTN6 518 aa33.44■■■□□ 2.94
PDCD4-205ENST00000467574 WWC3Q9ULE0 1092 aa33.44■■■□□ 2.94
PDCD4-205ENST00000467574 GPR162Q16538 588 aa33.43■■■□□ 2.94
PDCD4-205ENST00000467574 BRIP1Q9BX63 1249 aa33.43■■■□□ 2.94
PDCD4-205ENST00000467574 CHD4Q14839 1912 aa33.43■■■□□ 2.94
PDCD4-205ENST00000467574 FAM177BA6PVY3 158 aa33.42■■■□□ 2.94
PDCD4-205ENST00000467574 ST5P78524 1137 aa33.42■■■□□ 2.94
PDCD4-205ENST00000467574 TRMT2AQ8IZ69 625 aaKnown RBP33.42■■■□□ 2.94
PDCD4-205ENST00000467574 PELP1Q8IZL8 1130 aaKnown RBP33.42■■■□□ 2.94
PDCD4-205ENST00000467574 STK31Q9BXU1 1019 aa33.42■■■□□ 2.94
PDCD4-205ENST00000467574 ABCC12Q96J65 1359 aa33.42■■■□□ 2.94
PDCD4-205ENST00000467574 DCAF8L1A6NGE4 600 aa33.41■■■□□ 2.94
PDCD4-205ENST00000467574 TCIRG1Q13488 830 aa33.41■■■□□ 2.94
PDCD4-205ENST00000467574 HSP90AB3PQ58FF7 597 aa33.41■■■□□ 2.94
PDCD4-205ENST00000467574 SUSD4Q5VX71 490 aa33.41■■■□□ 2.94
PDCD4-205ENST00000467574 NTSR2O95665 410 aa33.4■■■□□ 2.94
PDCD4-205ENST00000467574 TPTE2Q6XPS3 522 aa33.4■■■□□ 2.94
PDCD4-205ENST00000467574 PARP10Q53GL7 1025 aa33.39■■■□□ 2.94
PDCD4-205ENST00000467574 G2E3Q7L622 706 aa33.39■■■□□ 2.94
PDCD4-205ENST00000467574 RIC1Q4ADV7 1423 aa33.38■■■□□ 2.93
PDCD4-205ENST00000467574 CACNA1SQ13698 1873 aa33.38■■■□□ 2.93
PDCD4-205ENST00000467574 NPHP1O15259 732 aa33.38■■■□□ 2.93
PDCD4-205ENST00000467574 NLRP10Q86W26 655 aa33.38■■■□□ 2.93
PDCD4-205ENST00000467574 NYXQ9GZU5 481 aa33.38■■■□□ 2.93
PDCD4-205ENST00000467574 SLC4A2P04920 1241 aa33.37■■■□□ 2.93
PDCD4-205ENST00000467574 NUTM1Q86Y26 1132 aa33.37■■■□□ 2.93
PDCD4-205ENST00000467574 C2CD5Q86YS7 1000 aa33.37■■■□□ 2.93
PDCD4-205ENST00000467574 ISCA1Q9BUE6 129 aa33.37■■■□□ 2.93
PDCD4-205ENST00000467574 ADCY9O60503 1353 aa33.36■■■□□ 2.93
PDCD4-205ENST00000467574 PDE6BP35913 854 aa33.36■■■□□ 2.93
PDCD4-205ENST00000467574 LAMB2P55268 1798 aa33.35■■■□□ 2.93
PDCD4-205ENST00000467574 HNRNPUQ00839 825 aaKnown RBP eCLIP33.35■■■□□ 2.93
PDCD4-205ENST00000467574 ERFEQ4G0M1 354 aa33.35■■■□□ 2.93
PDCD4-205ENST00000467574 PIM2Q9P1W9 311 aa33.35■■■□□ 2.93
PDCD4-205ENST00000467574 KLRG2A4D1S0 409 aaPredicted RBP33.34■■■□□ 2.93
PDCD4-205ENST00000467574 RIC3Q7Z5B4 369 aa33.34■■■□□ 2.93
PDCD4-205ENST00000467574 PDZRN3Q9UPQ7 1066 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms