RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 PRPF40BQ6NWY9 871 aaKnown RBP8.97□□□□□ -0.97
PTPRE-206ENST00000467366 BICDL1Q6ZP65 573 aa8.97□□□□□ -0.97
PTPRE-206ENST00000467366 SAPCD2Q86UD0 394 aa8.97□□□□□ -0.97
PTPRE-206ENST00000467366 ZIC5Q96T25 663 aa8.97□□□□□ -0.97
PTPRE-206ENST00000467366 SCN11AQ9UI33 1791 aa8.96□□□□□ -0.97
PTPRE-206ENST00000467366 PDE6BP35913 854 aa8.96□□□□□ -0.98
PTPRE-206ENST00000467366 FXR1P51114 621 aaKnown RBP eCLIP8.96□□□□□ -0.98
PTPRE-206ENST00000467366 CABP4P57796 275 aa8.96□□□□□ -0.98
PTPRE-206ENST00000467366 DNAJC10Q8IXB1 793 aa8.96□□□□□ -0.98
PTPRE-206ENST00000467366 NBPF15Q8N660 670 aa8.96□□□□□ -0.98
PTPRE-206ENST00000467366 PUS7Q96PZ0 661 aaKnown RBP8.96□□□□□ -0.98
PTPRE-206ENST00000467366 BRIP1Q9BX63 1249 aa8.96□□□□□ -0.98
PTPRE-206ENST00000467366 BCORQ6W2J9 1755 aa8.96□□□□□ -0.98
PTPRE-206ENST00000467366 FZD9O00144 591 aa8.95□□□□□ -0.98
PTPRE-206ENST00000467366 DLL1O00548 723 aa8.95□□□□□ -0.98
PTPRE-206ENST00000467366 PRR5LQ6MZQ0 368 aa8.95□□□□□ -0.98
PTPRE-206ENST00000467366 ZNF277Q9NRM2 450 aaPredicted RBP8.95□□□□□ -0.98
PTPRE-206ENST00000467366 PDZRN3Q9UPQ7 1066 aa8.95□□□□□ -0.98
PTPRE-206ENST00000467366 SOGA3Q5TF21 947 aa8.94□□□□□ -0.98
PTPRE-206ENST00000467366 TBC1D9BQ66K14 1250 aa8.94□□□□□ -0.98
PTPRE-206ENST00000467366 GPC2Q8N158 579 aa8.94□□□□□ -0.98
PTPRE-206ENST00000467366 NFATC2IPQ8NCF5 419 aa8.94□□□□□ -0.98
PTPRE-206ENST00000467366 C7orf43Q8WVR3 580 aa8.94□□□□□ -0.98
PTPRE-206ENST00000467366 CNKSR1Q969H4 720 aa8.94□□□□□ -0.98
PTPRE-206ENST00000467366 HHIPL1Q96JK4 782 aa8.94□□□□□ -0.98
PTPRE-206ENST00000467366 ZBTB1Q9Y2K1 713 aa8.94□□□□□ -0.98
PTPRE-206ENST00000467366 SCN7AQ01118 1682 aa8.94□□□□□ -0.98
PTPRE-206ENST00000467366 PPM1GO15355 546 aaPredicted RBP8.93□□□□□ -0.98
PTPRE-206ENST00000467366 HSP90AB1P08238 724 aaKnown RBP8.93□□□□□ -0.98
PTPRE-206ENST00000467366 SRGNP10124 158 aa8.93□□□□□ -0.98
PTPRE-206ENST00000467366 CYP19A1P11511 503 aaPredicted RBP8.93□□□□□ -0.98
PTPRE-206ENST00000467366 EPS15P42566 896 aa8.93□□□□□ -0.98
PTPRE-206ENST00000467366 FKBP4Q02790 459 aaKnown RBP eCLIP8.93□□□□□ -0.98
PTPRE-206ENST00000467366 CCDC93Q567U6 631 aa8.93□□□□□ -0.98
PTPRE-206ENST00000467366 STYK1Q6J9G0 422 aa8.93□□□□□ -0.98
PTPRE-206ENST00000467366 OLFM4Q6UX06 510 aa8.93□□□□□ -0.98
PTPRE-206ENST00000467366 COL4A5P29400 1685 aa8.93□□□□□ -0.98
PTPRE-206ENST00000467366 WASHC2AQ641Q2 1341 aa8.92□□□□□ -0.98
PTPRE-206ENST00000467366 CELF2O95319 508 aaKnown RBP8.92□□□□□ -0.98
PTPRE-206ENST00000467366 SCNN1DP51172 638 aa8.92□□□□□ -0.98
PTPRE-206ENST00000467366 HPS5Q9UPZ3 1129 aa8.92□□□□□ -0.98
PTPRE-206ENST00000467366 GJA3Q9Y6H8 435 aa8.92□□□□□ -0.98
PTPRE-206ENST00000467366 IARSP41252 1262 aaKnown RBP8.91□□□□□ -0.98
PTPRE-206ENST00000467366 NOGQ13253 232 aa8.91□□□□□ -0.98
PTPRE-206ENST00000467366 USP50Q70EL3 339 aaPredicted RBP8.91□□□□□ -0.98
PTPRE-206ENST00000467366 CTU1Q7Z7A3 348 aaKnown RBP8.91□□□□□ -0.98
PTPRE-206ENST00000467366 NPM2Q86SE8 214 aaKnown RBP8.91□□□□□ -0.98
PTPRE-206ENST00000467366 MASTLQ96GX5 879 aa8.91□□□□□ -0.98
PTPRE-206ENST00000467366 ANP32EQ9BTT0 268 aa8.91□□□□□ -0.98
PTPRE-206ENST00000467366 CARD11Q9BXL7 1154 aa8.91□□□□□ -0.98
PTPRE-206ENST00000467366 ST20-MTHFSA0A0A6YYL1 179 aa8.9□□□□□ -0.98
PTPRE-206ENST00000467366 TRPA1O75762 1119 aa8.9□□□□□ -0.98
PTPRE-206ENST00000467366 LMOD1P29536 600 aaPredicted RBP8.9□□□□□ -0.98
PTPRE-206ENST00000467366 MTHFSP49914 203 aa8.9□□□□□ -0.98
PTPRE-206ENST00000467366 ZNF530Q6P9A1 599 aaPredicted RBP8.9□□□□□ -0.98
PTPRE-206ENST00000467366 SAGE1Q9NXZ1 904 aa8.9□□□□□ -0.98
PTPRE-206ENST00000467366 FBXO3Q9UK99 471 aa8.9□□□□□ -0.98
PTPRE-206ENST00000467366 TAOK2Q9UL54 1235 aa8.9□□□□□ -0.98
PTPRE-206ENST00000467366 AKAP11Q9UKA4 1901 aa8.9□□□□□ -0.99
PTPRE-206ENST00000467366 PDIA4P13667 645 aaKnown RBP8.89□□□□□ -0.99
PTPRE-206ENST00000467366 CANXP27824 592 aaKnown RBP8.89□□□□□ -0.99
PTPRE-206ENST00000467366 EIF4A2Q14240 407 aaKnown RBP8.89□□□□□ -0.99
PTPRE-206ENST00000467366 SYNE4Q8N205 404 aa8.89□□□□□ -0.99
PTPRE-206ENST00000467366 GLIS2Q9BZE0 524 aaPredicted RBP8.89□□□□□ -0.99
PTPRE-206ENST00000467366 ZNF408Q9H9D4 720 aa8.89□□□□□ -0.99
PTPRE-206ENST00000467366 RNF186Q9NXI6 227 aa8.89□□□□□ -0.99
PTPRE-206ENST00000467366 SNED1Q8TER0 1413 aa8.88□□□□□ -0.99
PTPRE-206ENST00000467366 FAM155AB1AL88 458 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-206ENST00000467366 EIF5P55010 431 aaKnown RBP8.88□□□□□ -0.99
PTPRE-206ENST00000467366 PLEKHO1Q53GL0 409 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-206ENST00000467366 AKAP4Q5JQC9 854 aa8.88□□□□□ -0.99
PTPRE-206ENST00000467366 CNBD1Q8NA66 436 aa8.88□□□□□ -0.99
PTPRE-206ENST00000467366 PKNOX2Q96KN3 472 aa8.88□□□□□ -0.99
PTPRE-206ENST00000467366 TESK2Q96S53 571 aa8.88□□□□□ -0.99
PTPRE-206ENST00000467366 SIN3AQ96ST3 1273 aa8.88□□□□□ -0.99
PTPRE-206ENST00000467366 SZT2Q5T011 3432 aa8.87□□□□□ -0.99
PTPRE-206ENST00000467366 EIF6P56537 245 aaKnown RBP8.87□□□□□ -0.99
PTPRE-206ENST00000467366 KIF23Q02241 960 aaPredicted RBP8.87□□□□□ -0.99
PTPRE-206ENST00000467366 SLC39A6Q13433 755 aa8.87□□□□□ -0.99
PTPRE-206ENST00000467366 RTKN2Q8IZC4 609 aa8.87□□□□□ -0.99
PTPRE-206ENST00000467366 JDP2Q8WYK2 163 aa8.87□□□□□ -0.99
PTPRE-206ENST00000467366 UBR2Q8IWV8 1755 aa8.86□□□□□ -0.99
PTPRE-206ENST00000467366 NPHP1O15259 732 aa8.86□□□□□ -0.99
PTPRE-206ENST00000467366 NPR1P16066 1061 aa8.86□□□□□ -0.99
PTPRE-206ENST00000467366 HUNKP57058 714 aa8.86□□□□□ -0.99
PTPRE-206ENST00000467366 ST5P78524 1137 aa8.86□□□□□ -0.99
PTPRE-206ENST00000467366 C1orf141Q5JVX7 400 aa8.86□□□□□ -0.99
PTPRE-206ENST00000467366 SLC17A8Q8NDX2 589 aa8.86□□□□□ -0.99
PTPRE-206ENST00000467366 TBC1D2BQ9UPU7 963 aa8.86□□□□□ -0.99
PTPRE-206ENST00000467366 AMOTQ4VCS5 1084 aa8.85□□□□□ -0.99
PTPRE-206ENST00000467366 RGMBQ6NW40 437 aa8.85□□□□□ -0.99
PTPRE-206ENST00000467366 DLK2Q6UY11 383 aa8.85□□□□□ -0.99
PTPRE-206ENST00000467366 SETDB2Q96T68 719 aa8.85□□□□□ -0.99
PTPRE-206ENST00000467366 ADARB2Q9NS39 739 aaKnown RBP8.85□□□□□ -0.99
PTPRE-206ENST00000467366 GPRC5DQ9NZD1 345 aa8.85□□□□□ -0.99
PTPRE-206ENST00000467366 POLKQ9UBT6 870 aa8.85□□□□□ -0.99
PTPRE-206ENST00000467366 PGAP2Q9UHJ9 254 aa8.85□□□□□ -0.99
PTPRE-206ENST00000467366 COLQQ9Y215 455 aaPredicted RBP8.85□□□□□ -0.99
PTPRE-206ENST00000467366 PAPPA2Q9BXP8 1791 aa8.84□□□□□ -0.99
PTPRE-206ENST00000467366 A0A087WZG4 1122 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms