RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 TRIM34Q9BYJ4 488 aa18.65■□□□□ 0.58
ABCF3-206ENST00000466742 ELL2O00472 640 aaPredicted RBP18.64■□□□□ 0.57
ABCF3-206ENST00000466742 AKAP4Q5JQC9 854 aa18.64■□□□□ 0.57
ABCF3-206ENST00000466742 FAM184AQ8NB25 1140 aa18.64■□□□□ 0.57
ABCF3-206ENST00000466742 TTC12Q9H892 705 aaPredicted RBP18.64■□□□□ 0.57
ABCF3-206ENST00000466742 TSPYL4Q9UJ04 414 aa18.64■□□□□ 0.57
ABCF3-206ENST00000466742 PLEKHG2Q9H7P9 1386 aa18.64■□□□□ 0.57
ABCF3-206ENST00000466742 CHRNA2Q15822 529 aa18.63■□□□□ 0.57
ABCF3-206ENST00000466742 ARHGAP45Q92619 1136 aa18.63■□□□□ 0.57
ABCF3-206ENST00000466742 NSFL1CQ9UNZ2 370 aaKnown RBP18.63■□□□□ 0.57
ABCF3-206ENST00000466742 RGPD2P0DJD1 1756 aa18.63■□□□□ 0.57
ABCF3-206ENST00000466742 NUCB1Q02818 461 aa18.62■□□□□ 0.57
ABCF3-206ENST00000466742 CERS3Q8IU89 383 aa18.62■□□□□ 0.57
ABCF3-206ENST00000466742 KIAA1524Q8TCG1 905 aa18.62■□□□□ 0.57
ABCF3-206ENST00000466742 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
ABCF3-206ENST00000466742 PKP1Q13835 747 aa18.62■□□□□ 0.57
ABCF3-206ENST00000466742 TAF7Q15545 349 aaPredicted RBP18.62■□□□□ 0.57
ABCF3-206ENST00000466742 ZNF530Q6P9A1 599 aaPredicted RBP18.62■□□□□ 0.57
ABCF3-206ENST00000466742 EFCC1Q9HA90 598 aa18.62■□□□□ 0.57
ABCF3-206ENST00000466742 NLRP2Q9NX02 1062 aa18.62■□□□□ 0.57
ABCF3-206ENST00000466742 MIS18AQ9NYP9 233 aa18.61■□□□□ 0.57
ABCF3-206ENST00000466742 RABEP1Q15276 862 aa18.61■□□□□ 0.57
ABCF3-206ENST00000466742 PRDM11Q9NQV5 511 aa18.61■□□□□ 0.57
ABCF3-206ENST00000466742 CSB-PGBD3P0DP91 1061 aa18.6■□□□□ 0.57
ABCF3-206ENST00000466742 KRT222Q8N1A0 295 aa18.6■□□□□ 0.57
ABCF3-206ENST00000466742 GEMIN8Q9NWZ8 242 aaKnown RBP18.6■□□□□ 0.57
ABCF3-206ENST00000466742 ZDHHC9Q9Y397 364 aa18.6■□□□□ 0.57
ABCF3-206ENST00000466742 KRT24Q2M2I5 525 aa18.6■□□□□ 0.57
ABCF3-206ENST00000466742 KIF18AQ8NI77 898 aa18.6■□□□□ 0.57
ABCF3-206ENST00000466742 RAPGEF4Q8WZA2 1011 aa18.6■□□□□ 0.57
ABCF3-206ENST00000466742 FEZ2Q9UHY8 353 aaPredicted RBP18.6■□□□□ 0.57
ABCF3-206ENST00000466742 OVOS2A0A0G2JMS6 1433 aa18.59■□□□□ 0.57
ABCF3-206ENST00000466742 FAM53CQ9NYF3 392 aa18.59■□□□□ 0.57
ABCF3-206ENST00000466742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.59■□□□□ 0.57
ABCF3-206ENST00000466742 RGPD5Q99666 1765 aa18.59■□□□□ 0.57
ABCF3-206ENST00000466742 SOS1Q07889 1333 aaPredicted RBP18.59■□□□□ 0.57
ABCF3-206ENST00000466742 C1orf141Q5JVX7 400 aa18.58■□□□□ 0.57
ABCF3-206ENST00000466742 FAM208AQ9UK61 1670 aaKnown RBP18.58■□□□□ 0.56
ABCF3-206ENST00000466742 SYAP1Q96A49 352 aaPredicted RBP18.58■□□□□ 0.56
ABCF3-206ENST00000466742 DDX19BQ9UMR2 479 aa18.58■□□□□ 0.56
ABCF3-206ENST00000466742 ADCY5O95622 1261 aa18.57■□□□□ 0.56
ABCF3-206ENST00000466742 TATP17735 454 aaPredicted RBP18.57■□□□□ 0.56
ABCF3-206ENST00000466742 TBC1D9Q6ZT07 1266 aa18.57■□□□□ 0.56
ABCF3-206ENST00000466742 MPNDQ8N594 471 aa18.57■□□□□ 0.56
ABCF3-206ENST00000466742 LGR6Q9HBX8 967 aa18.57■□□□□ 0.56
ABCF3-206ENST00000466742 AHDC1Q5TGY3 1603 aaPredicted RBP18.57■□□□□ 0.56
ABCF3-206ENST00000466742 TPM3P06753 285 aa18.56■□□□□ 0.56
ABCF3-206ENST00000466742 WDR17Q8IZU2 1322 aa18.56■□□□□ 0.56
ABCF3-206ENST00000466742 PHF14O94880 888 aa18.56■□□□□ 0.56
ABCF3-206ENST00000466742 TMEM57Q8N5G2 664 aa18.56■□□□□ 0.56
ABCF3-206ENST00000466742 RNMTO43148 476 aaKnown RBP18.55■□□□□ 0.56
ABCF3-206ENST00000466742 CHD1LQ86WJ1 897 aa18.55■□□□□ 0.56
ABCF3-206ENST00000466742 API5Q9BZZ5 524 aaKnown RBP18.55■□□□□ 0.56
ABCF3-206ENST00000466742 USP25Q9UHP3 1055 aa18.55■□□□□ 0.56
ABCF3-206ENST00000466742 ITPRIPQ8IWB1 547 aa18.55■□□□□ 0.56
ABCF3-206ENST00000466742 ROBO1Q9Y6N7 1651 aa18.55■□□□□ 0.56
ABCF3-206ENST00000466742 ABCA3Q99758 1704 aa18.54■□□□□ 0.56
ABCF3-206ENST00000466742 MEGF6O75095 1541 aa18.54■□□□□ 0.56
ABCF3-206ENST00000466742 MPRIPQ6WCQ1 1025 aa18.54■□□□□ 0.56
ABCF3-206ENST00000466742 SPG7Q9UQ90 795 aa18.54■□□□□ 0.56
ABCF3-206ENST00000466742 COL5A2P05997 1499 aaPredicted RBP18.54■□□□□ 0.56
ABCF3-206ENST00000466742 ABCC4O15439 1325 aa18.54■□□□□ 0.56
ABCF3-206ENST00000466742 PSEN1P49768 467 aa18.54■□□□□ 0.56
ABCF3-206ENST00000466742 TEFQ10587 303 aa18.53■□□□□ 0.56
ABCF3-206ENST00000466742 SMTNL1A8MU46 457 aa18.52■□□□□ 0.56
ABCF3-206ENST00000466742 LNPKQ9C0E8 428 aa18.52■□□□□ 0.56
ABCF3-206ENST00000466742 PYCARDQ9ULZ3 195 aa18.52■□□□□ 0.56
ABCF3-206ENST00000466742 ERICH4A6NGS2 130 aa18.51■□□□□ 0.55
ABCF3-206ENST00000466742 PTPRCP08575 1304 aa18.51■□□□□ 0.55
ABCF3-206ENST00000466742 KCNF1Q9H3M0 494 aa18.51■□□□□ 0.55
ABCF3-206ENST00000466742 PHKG2P15735 406 aa18.5■□□□□ 0.55
ABCF3-206ENST00000466742 CYP2C19P33261 490 aa18.5■□□□□ 0.55
ABCF3-206ENST00000466742 ZBTB40Q9NUA8 1239 aa18.5■□□□□ 0.55
ABCF3-206ENST00000466742 ADAMTS7Q9UKP4 1686 aa18.5■□□□□ 0.55
ABCF3-206ENST00000466742 CLGNO14967 610 aa18.5■□□□□ 0.55
ABCF3-206ENST00000466742 EIF4A1P60842 406 aaKnown RBP18.5■□□□□ 0.55
ABCF3-206ENST00000466742 TOM1L2Q6ZVM7 507 aa18.5■□□□□ 0.55
ABCF3-206ENST00000466742 ZGPATQ8N5A5 531 aaKnown RBP18.5■□□□□ 0.55
ABCF3-206ENST00000466742 CARD10Q9BWT7 1032 aa18.5■□□□□ 0.55
ABCF3-206ENST00000466742 BTBD11A6QL63 1104 aa18.49■□□□□ 0.55
ABCF3-206ENST00000466742 KDM4AO75164 1064 aa18.49■□□□□ 0.55
ABCF3-206ENST00000466742 SLC4A2P04920 1241 aa18.49■□□□□ 0.55
ABCF3-206ENST00000466742 HOXB7P09629 217 aa18.49■□□□□ 0.55
ABCF3-206ENST00000466742 HNRNPH2P55795 449 aaKnown RBP18.49■□□□□ 0.55
ABCF3-206ENST00000466742 CCDC30Q5VVM6 783 aa18.49■□□□□ 0.55
ABCF3-206ENST00000466742 IFNL2Q8IZJ0 200 aa18.49■□□□□ 0.55
ABCF3-206ENST00000466742 ZNF397Q8NF99 534 aaPredicted RBP18.48■□□□□ 0.55
ABCF3-206ENST00000466742 HDAC5Q9UQL6 1122 aa18.48■□□□□ 0.55
ABCF3-206ENST00000466742 CDC45O75419 566 aa18.48■□□□□ 0.55
ABCF3-206ENST00000466742 STK31Q9BXU1 1019 aa18.48■□□□□ 0.55
ABCF3-206ENST00000466742 RGS12O14924 1447 aa18.47■□□□□ 0.55
ABCF3-206ENST00000466742 TOM1O60784 492 aa18.47■□□□□ 0.55
ABCF3-206ENST00000466742 CHAMP1Q96JM3 812 aa18.47■□□□□ 0.55
ABCF3-206ENST00000466742 COL22A1Q8NFW1 1626 aaPredicted RBP18.47■□□□□ 0.55
ABCF3-206ENST00000466742 ZBTB7BO15156 539 aaPredicted RBP18.46■□□□□ 0.55
ABCF3-206ENST00000466742 NOP2P46087 812 aaKnown RBP18.46■□□□□ 0.55
ABCF3-206ENST00000466742 RAD51AP2Q09MP3 1159 aa18.46■□□□□ 0.55
ABCF3-206ENST00000466742 PAXBP1Q9Y5B6 917 aa18.46■□□□□ 0.55
ABCF3-206ENST00000466742 KDM6AO15550 1401 aaPredicted RBP18.46■□□□□ 0.55
ABCF3-206ENST00000466742 CYP27B1O15528 508 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms