RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 GLMNQ92990 594 aa8.81□□□□□ -1
CHMP2B-202ENST00000466696 GNB5O14775 395 aa8.8□□□□□ -1
CHMP2B-202ENST00000466696 HOXB4P17483 251 aaPredicted RBP8.8□□□□□ -1
CHMP2B-202ENST00000466696 LINC00114Q6XXX2 140 aa8.8□□□□□ -1
CHMP2B-202ENST00000466696 LRRC69Q6ZNQ3 347 aa8.8□□□□□ -1
CHMP2B-202ENST00000466696 KLF15Q9UIH9 416 aa8.8□□□□□ -1
CHMP2B-202ENST00000466696 HIRAP54198 1017 aaPredicted RBP8.79□□□□□ -1
CHMP2B-202ENST00000466696 C1orf53Q5VUE5 145 aa8.79□□□□□ -1
CHMP2B-202ENST00000466696 FCHSD1Q86WN1 690 aa8.79□□□□□ -1
CHMP2B-202ENST00000466696 RHPN1Q8TCX5 695 aa8.79□□□□□ -1
CHMP2B-202ENST00000466696 C7orf43Q8WVR3 580 aa8.79□□□□□ -1
CHMP2B-202ENST00000466696 SPOCK3Q9BQ16 436 aa8.79□□□□□ -1
CHMP2B-202ENST00000466696 TSPAN10Q9H1Z9 355 aaPredicted RBP8.79□□□□□ -1
CHMP2B-202ENST00000466696 ITGB2P05107 769 aa8.78□□□□□ -1
CHMP2B-202ENST00000466696 COL8A1P27658 744 aa8.78□□□□□ -1
CHMP2B-202ENST00000466696 DGKGP49619 791 aa8.78□□□□□ -1
CHMP2B-202ENST00000466696 PCBP4P57723 403 aaKnown RBP8.78□□□□□ -1
CHMP2B-202ENST00000466696 CHSY3Q70JA7 882 aa8.78□□□□□ -1
CHMP2B-202ENST00000466696 ZNF594Q96JF6 807 aaPredicted RBP8.78□□□□□ -1
CHMP2B-202ENST00000466696 STRN4Q9NRL3 753 aa8.78□□□□□ -1
CHMP2B-202ENST00000466696 TFIP11Q9UBB9 837 aaKnown RBP8.78□□□□□ -1
CHMP2B-202ENST00000466696 RASA1P20936 1047 aa8.77□□□□□ -1.01
CHMP2B-202ENST00000466696 GRIN2CQ14957 1233 aa8.77□□□□□ -1.01
CHMP2B-202ENST00000466696 SH3PXD2AQ5TCZ1 1133 aa8.77□□□□□ -1.01
CHMP2B-202ENST00000466696 POTEAQ6S8J7 498 aa8.77□□□□□ -1.01
CHMP2B-202ENST00000466696 NOP53Q9NZM5 478 aaKnown RBP8.77□□□□□ -1.01
CHMP2B-202ENST00000466696 ANKIB1Q9P2G1 1089 aa8.77□□□□□ -1.01
CHMP2B-202ENST00000466696 KRBA1A5PL33 1030 aa8.76□□□□□ -1.01
CHMP2B-202ENST00000466696 TSEN2Q8NCE0 465 aaKnown RBP8.76□□□□□ -1.01
CHMP2B-202ENST00000466696 MAFBQ9Y5Q3 323 aaPredicted RBP8.76□□□□□ -1.01
CHMP2B-202ENST00000466696 A6NJR5 290 aa8.75□□□□□ -1.01
CHMP2B-202ENST00000466696 SFI1A8K8P3 1242 aa8.75□□□□□ -1.01
CHMP2B-202ENST00000466696 PPP1R12BO60237 982 aaPredicted RBP8.75□□□□□ -1.01
CHMP2B-202ENST00000466696 DKK1O94907 266 aa8.75□□□□□ -1.01
CHMP2B-202ENST00000466696 PROCP04070 461 aa8.75□□□□□ -1.01
CHMP2B-202ENST00000466696 SYT9Q86SS6 491 aa8.75□□□□□ -1.01
CHMP2B-202ENST00000466696 CALR3Q96L12 384 aaKnown RBP8.75□□□□□ -1.01
CHMP2B-202ENST00000466696 PHACTR1Q9C0D0 580 aa8.75□□□□□ -1.01
CHMP2B-202ENST00000466696 SUV39H2Q9H5I1 410 aa8.75□□□□□ -1.01
CHMP2B-202ENST00000466696 HCN4Q9Y3Q4 1203 aa8.75□□□□□ -1.01
CHMP2B-202ENST00000466696 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
CHMP2B-202ENST00000466696 ALAS2P22557 587 aa8.74□□□□□ -1.01
CHMP2B-202ENST00000466696 SEC13P55735 322 aa8.74□□□□□ -1.01
CHMP2B-202ENST00000466696 STAG2Q8N3U4 1231 aa8.74□□□□□ -1.01
CHMP2B-202ENST00000466696 GAS2L2Q8NHY3 880 aa8.74□□□□□ -1.01
CHMP2B-202ENST00000466696 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
CHMP2B-202ENST00000466696 ELOA3CA0A087WX78 387 aaPredicted RBP8.73□□□□□ -1.01
CHMP2B-202ENST00000466696 ELOA3DA6NLF2 546 aaPredicted RBP8.73□□□□□ -1.01
CHMP2B-202ENST00000466696 SIN3BO75182 1162 aa8.73□□□□□ -1.01
CHMP2B-202ENST00000466696 NEUROD1Q13562 356 aa8.73□□□□□ -1.01
CHMP2B-202ENST00000466696 ELOA3BQ3SY89 546 aa8.73□□□□□ -1.01
CHMP2B-202ENST00000466696 LARP1Q6PKG0 1096 aaKnown RBP8.73□□□□□ -1.01
CHMP2B-202ENST00000466696 ELOA3Q8NG57 546 aa8.73□□□□□ -1.01
CHMP2B-202ENST00000466696 ATAD2Q6PL18 1390 aa8.73□□□□□ -1.01
CHMP2B-202ENST00000466696 C21orf2O43822 256 aa8.72□□□□□ -1.01
CHMP2B-202ENST00000466696 SFSWAPQ12872 951 aaKnown RBP8.72□□□□□ -1.01
CHMP2B-202ENST00000466696 HIF1AQ16665 826 aa8.72□□□□□ -1.01
CHMP2B-202ENST00000466696 CEP63Q96MT8 703 aa8.72□□□□□ -1.01
CHMP2B-202ENST00000466696 PPP1R12CQ9BZL4 782 aa8.72□□□□□ -1.01
CHMP2B-202ENST00000466696 ALDH16A1Q8IZ83 802 aa8.71□□□□□ -1.02
CHMP2B-202ENST00000466696 HSH2DQ96JZ2 352 aa8.71□□□□□ -1.02
CHMP2B-202ENST00000466696 SUSD3Q96L08 255 aa8.71□□□□□ -1.02
CHMP2B-202ENST00000466696 C2orf49Q9BVC5 232 aaPredicted RBP8.71□□□□□ -1.02
CHMP2B-202ENST00000466696 BRD7Q9NPI1 651 aa8.71□□□□□ -1.02
CHMP2B-202ENST00000466696 ADARB2-AS1A8MUL3 147 aa8.7□□□□□ -1.02
CHMP2B-202ENST00000466696 KCNQ4P56696 695 aa8.7□□□□□ -1.02
CHMP2B-202ENST00000466696 SPEM2Q0P670 501 aa8.7□□□□□ -1.02
CHMP2B-202ENST00000466696 SCG3Q8WXD2 468 aaKnown RBP8.7□□□□□ -1.02
CHMP2B-202ENST00000466696 SLC30A3Q99726 388 aa8.7□□□□□ -1.02
CHMP2B-202ENST00000466696 MDFIQ99750 246 aa8.7□□□□□ -1.02
CHMP2B-202ENST00000466696 PTK7Q13308 1070 aa8.69□□□□□ -1.02
CHMP2B-202ENST00000466696 ZNF280CQ8ND82 737 aa8.69□□□□□ -1.02
CHMP2B-202ENST00000466696 TNFRSF25Q93038 417 aa8.69□□□□□ -1.02
CHMP2B-202ENST00000466696 HINFPQ9BQA5 517 aa8.69□□□□□ -1.02
CHMP2B-202ENST00000466696 KCNH4Q9UQ05 1017 aa8.69□□□□□ -1.02
CHMP2B-202ENST00000466696 FAM196BA6NMK8 535 aa8.68□□□□□ -1.02
CHMP2B-202ENST00000466696 ADAM23O75077 832 aa8.68□□□□□ -1.02
CHMP2B-202ENST00000466696 TYRO3Q06418 890 aa8.68□□□□□ -1.02
CHMP2B-202ENST00000466696 CRTC2Q53ET0 693 aaPredicted RBP8.68□□□□□ -1.02
CHMP2B-202ENST00000466696 KANK4Q5T7N3 995 aaPredicted RBP8.68□□□□□ -1.02
CHMP2B-202ENST00000466696 CHMP7Q8WUX9 453 aaPredicted RBP8.68□□□□□ -1.02
CHMP2B-202ENST00000466696 VRTNQ9H8Y1 702 aa8.68□□□□□ -1.02
CHMP2B-202ENST00000466696 SPDYE3A6NKU9 549 aa8.67□□□□□ -1.02
CHMP2B-202ENST00000466696 LMOD1P29536 600 aaPredicted RBP8.67□□□□□ -1.02
CHMP2B-202ENST00000466696 BAG6P46379 1132 aa8.67□□□□□ -1.02
CHMP2B-202ENST00000466696 DPYDQ12882 1025 aa8.67□□□□□ -1.02
CHMP2B-202ENST00000466696 TRIM11Q96F44 468 aa8.67□□□□□ -1.02
CHMP2B-202ENST00000466696 PLVAPQ9BX97 442 aa8.67□□□□□ -1.02
CHMP2B-202ENST00000466696 C1QTNF9BB2RNN3 333 aa8.66□□□□□ -1.02
CHMP2B-202ENST00000466696 BTLAQ7Z6A9 289 aa8.66□□□□□ -1.02
CHMP2B-202ENST00000466696 ANKMY2Q8IV38 441 aa8.66□□□□□ -1.02
CHMP2B-202ENST00000466696 NGLY1Q96IV0 654 aa8.66□□□□□ -1.02
CHMP2B-202ENST00000466696 USP17L15C9J2P7 530 aa8.65□□□□□ -1.02
CHMP2B-202ENST00000466696 USP17L10C9JJH3 530 aa8.65□□□□□ -1.02
CHMP2B-202ENST00000466696 USP17L13C9JLJ4 530 aa8.65□□□□□ -1.02
CHMP2B-202ENST00000466696 USP17L12C9JPN9 530 aa8.65□□□□□ -1.02
CHMP2B-202ENST00000466696 USP17L11C9JVI0 530 aa8.65□□□□□ -1.02
CHMP2B-202ENST00000466696 USP17L21D6R901 530 aa8.65□□□□□ -1.02
CHMP2B-202ENST00000466696 USP17L18D6R9N7 530 aa8.65□□□□□ -1.02
CHMP2B-202ENST00000466696 USP17L22D6RA61 530 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms