RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 SHANK2Q9UPX8 1470 aa11.7□□□□□ -0.54
LSG1-206ENST00000466391 PRG4Q92954 1404 aaPredicted RBP11.7□□□□□ -0.54
LSG1-206ENST00000466391 CHD1O14646 1710 aa11.7□□□□□ -0.54
LSG1-206ENST00000466391 TLR1Q15399 786 aa11.7□□□□□ -0.54
LSG1-206ENST00000466391 SLC27A3Q5K4L6 730 aa11.7□□□□□ -0.54
LSG1-206ENST00000466391 STK32AQ8WU08 396 aa11.7□□□□□ -0.54
LSG1-206ENST00000466391 SIN3AQ96ST3 1273 aa11.7□□□□□ -0.54
LSG1-206ENST00000466391 KDM6BO15054 1643 aa11.7□□□□□ -0.54
LSG1-206ENST00000466391 RNF144AP50876 292 aaPredicted RBP11.69□□□□□ -0.54
LSG1-206ENST00000466391 SMTNP53814 917 aa11.69□□□□□ -0.54
LSG1-206ENST00000466391 TSEN2Q8NCE0 465 aaKnown RBP11.69□□□□□ -0.54
LSG1-206ENST00000466391 ATP10BO94823 1461 aa11.69□□□□□ -0.54
LSG1-206ENST00000466391 CDC42BPAQ5VT25 1732 aa11.69□□□□□ -0.54
LSG1-206ENST00000466391 TONSLQ96HA7 1378 aa11.68□□□□□ -0.54
LSG1-206ENST00000466391 GPC1P35052 558 aa11.68□□□□□ -0.54
LSG1-206ENST00000466391 TNS4Q8IZW8 715 aa11.68□□□□□ -0.54
LSG1-206ENST00000466391 RNF217Q8TC41 542 aa11.68□□□□□ -0.54
LSG1-206ENST00000466391 KIFC2Q96AC6 838 aa11.68□□□□□ -0.54
LSG1-206ENST00000466391 SLC4A9Q96Q91 983 aa11.68□□□□□ -0.54
LSG1-206ENST00000466391 MAN1A2O60476 641 aa11.67□□□□□ -0.54
LSG1-206ENST00000466391 LGR5O75473 907 aa11.67□□□□□ -0.54
LSG1-206ENST00000466391 CSB-PGBD3P0DP91 1061 aa11.67□□□□□ -0.54
LSG1-206ENST00000466391 TMEM164Q5U3C3 297 aa11.67□□□□□ -0.54
LSG1-206ENST00000466391 TRIM47Q96LD4 638 aa11.67□□□□□ -0.54
LSG1-206ENST00000466391 ZSCAN10Q96SZ4 725 aaPredicted RBP11.67□□□□□ -0.54
LSG1-206ENST00000466391 HINFPQ9BQA5 517 aa11.67□□□□□ -0.54
LSG1-206ENST00000466391 FHDC1Q9C0D6 1143 aaPredicted RBP11.67□□□□□ -0.54
LSG1-206ENST00000466391 A6NJY4 79 aa11.66□□□□□ -0.54
LSG1-206ENST00000466391 SOBPA7XYQ1 873 aa11.66□□□□□ -0.54
LSG1-206ENST00000466391 POTECB2RU33 542 aa11.66□□□□□ -0.54
LSG1-206ENST00000466391 M0R2N6 131 aa11.66□□□□□ -0.54
LSG1-206ENST00000466391 PRICKLE2Q7Z3G6 844 aa11.66□□□□□ -0.54
LSG1-206ENST00000466391 GRIP2Q9C0E4 1043 aa11.66□□□□□ -0.54
LSG1-206ENST00000466391 DNMT3LQ9UJW3 386 aa11.66□□□□□ -0.54
LSG1-206ENST00000466391 ARHGEF5Q12774 1597 aa11.66□□□□□ -0.54
LSG1-206ENST00000466391 C11orf95C9JLR9 678 aaPredicted RBP11.65□□□□□ -0.54
LSG1-206ENST00000466391 GTF2E1P29083 439 aaPredicted RBP11.65□□□□□ -0.54
LSG1-206ENST00000466391 TMEM214Q6NUQ4 689 aaKnown RBP11.65□□□□□ -0.54
LSG1-206ENST00000466391 PTPRGP23470 1445 aa11.64□□□□□ -0.55
LSG1-206ENST00000466391 NCOA1Q15788 1441 aa11.64□□□□□ -0.55
LSG1-206ENST00000466391 SNRPBP14678 240 aaKnown RBP11.64□□□□□ -0.55
LSG1-206ENST00000466391 LYSMD3Q7Z3D4 306 aa11.64□□□□□ -0.55
LSG1-206ENST00000466391 RRP7BPQ9NSQ0 103 aa11.64□□□□□ -0.55
LSG1-206ENST00000466391 EPHA4P54764 986 aa11.63□□□□□ -0.55
LSG1-206ENST00000466391 MTFR1Q15390 333 aa11.63□□□□□ -0.55
LSG1-206ENST00000466391 TBCELQ5QJ74 424 aa11.63□□□□□ -0.55
LSG1-206ENST00000466391 KDM5DQ9BY66 1539 aa11.62□□□□□ -0.55
LSG1-206ENST00000466391 PREX2Q70Z35 1606 aa11.62□□□□□ -0.55
LSG1-206ENST00000466391 PLEKHD1A6NEE1 506 aa11.62□□□□□ -0.55
LSG1-206ENST00000466391 POU4F2Q12837 409 aa11.62□□□□□ -0.55
LSG1-206ENST00000466391 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.62□□□□□ -0.55
LSG1-206ENST00000466391 RETREG2Q8NC44 543 aa11.62□□□□□ -0.55
LSG1-206ENST00000466391 SCHIP1Q9P0W5 487 aaPredicted RBP11.62□□□□□ -0.55
LSG1-206ENST00000466391 CFDP1Q9UEE9 299 aaPredicted RBP11.62□□□□□ -0.55
LSG1-206ENST00000466391 USP3Q9Y6I4 520 aa11.62□□□□□ -0.55
LSG1-206ENST00000466391 ANKRD30BQ9BXX2 1392 aa11.62□□□□□ -0.55
LSG1-206ENST00000466391 RPRD2Q5VT52 1461 aaKnown RBP11.62□□□□□ -0.55
LSG1-206ENST00000466391 CLASP1Q7Z460 1538 aa11.61□□□□□ -0.55
LSG1-206ENST00000466391 CARNS1A5YM72 827 aa11.61□□□□□ -0.55
LSG1-206ENST00000466391 CDK2AP1O14519 115 aa11.61□□□□□ -0.55
LSG1-206ENST00000466391 RHOQP17081 205 aa11.61□□□□□ -0.55
LSG1-206ENST00000466391 FAM69CQ0P6D2 419 aa11.61□□□□□ -0.55
LSG1-206ENST00000466391 GNASQ5JWF2 1037 aa11.61□□□□□ -0.55
LSG1-206ENST00000466391 SLC9A9Q8IVB4 645 aa11.61□□□□□ -0.55
LSG1-206ENST00000466391 MPHOSPH9Q99550 1183 aa11.61□□□□□ -0.55
LSG1-206ENST00000466391 TSPAN10Q9H1Z9 355 aaPredicted RBP11.61□□□□□ -0.55
LSG1-206ENST00000466391 PZPP20742 1482 aa11.6□□□□□ -0.55
LSG1-206ENST00000466391 ANKRD30AQ9BXX3 1397 aa11.6□□□□□ -0.55
LSG1-206ENST00000466391 IQSEC3Q9UPP2 1182 aaPredicted RBP11.6□□□□□ -0.55
LSG1-206ENST00000466391 ABCC2Q92887 1545 aa11.6□□□□□ -0.55
LSG1-206ENST00000466391 TEX14Q8IWB6 1497 aa11.59□□□□□ -0.55
LSG1-206ENST00000466391 TMEM88BA6NKF7 163 aa11.59□□□□□ -0.55
LSG1-206ENST00000466391 PHKA2P46019 1235 aa11.59□□□□□ -0.55
LSG1-206ENST00000466391 FOXK2Q01167 660 aa11.59□□□□□ -0.55
LSG1-206ENST00000466391 SWI5Q1ZZU3 235 aa11.59□□□□□ -0.55
LSG1-206ENST00000466391 RHBDD1Q8TEB9 315 aa11.59□□□□□ -0.55
LSG1-206ENST00000466391 SCG3Q8WXD2 468 aaKnown RBP11.59□□□□□ -0.55
LSG1-206ENST00000466391 ZNF644Q9H582 1327 aaPredicted RBP11.59□□□□□ -0.55
LSG1-206ENST00000466391 MAST1Q9Y2H9 1570 aa11.58□□□□□ -0.55
LSG1-206ENST00000466391 UHRF1BP1LA0JNW5 1464 aa11.58□□□□□ -0.56
LSG1-206ENST00000466391 SPATA31C2B4DYI2 1134 aa11.58□□□□□ -0.56
LSG1-206ENST00000466391 NBPF10Q6P3W6 841 aaKnown RBP11.58□□□□□ -0.56
LSG1-206ENST00000466391 TAS1R3Q7RTX0 852 aa11.58□□□□□ -0.56
LSG1-206ENST00000466391 NBPF15Q8N660 670 aa11.58□□□□□ -0.56
LSG1-206ENST00000466391 GAS2L2Q8NHY3 880 aa11.58□□□□□ -0.56
LSG1-206ENST00000466391 CABP1Q9NZU7 370 aa11.58□□□□□ -0.56
LSG1-206ENST00000466391 CDC42BPBQ9Y5S2 1711 aa11.57□□□□□ -0.56
LSG1-206ENST00000466391 PRMT3O60678 531 aa11.57□□□□□ -0.56
LSG1-206ENST00000466391 C4orf17Q53FE4 359 aa11.57□□□□□ -0.56
LSG1-206ENST00000466391 ZNF787Q6DD87 383 aa11.57□□□□□ -0.56
LSG1-206ENST00000466391 PRIMPOLQ96LW4 560 aa11.57□□□□□ -0.56
LSG1-206ENST00000466391 NIFKQ9BYG3 293 aaKnown RBP11.57□□□□□ -0.56
LSG1-206ENST00000466391 MBD5Q9P267 1494 aa11.57□□□□□ -0.56
LSG1-206ENST00000466391 ATAD2Q6PL18 1390 aa11.56□□□□□ -0.56
LSG1-206ENST00000466391 C9orf84Q5VXU9 1444 aa11.56□□□□□ -0.56
LSG1-206ENST00000466391 SAMD9LQ8IVG5 1584 aa11.55□□□□□ -0.56
LSG1-206ENST00000466391 ANKRD50Q9ULJ7 1429 aa11.55□□□□□ -0.56
LSG1-206ENST00000466391 KIAA1107Q9UPP5 1409 aa11.55□□□□□ -0.56
LSG1-206ENST00000466391 C21orf2O43822 256 aa11.55□□□□□ -0.56
LSG1-206ENST00000466391 PPP1R12BO60237 982 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms