RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 TSR2Q969E8 191 aaKnown RBP33.64■■■□□ 2.98
SMC4-206ENST00000465903 DCAF8L1A6NGE4 600 aa33.63■■■□□ 2.97
SMC4-206ENST00000465903 PXDNLA1KZ92 1463 aa33.63■■■□□ 2.97
SMC4-206ENST00000465903 ELL2O00472 640 aaPredicted RBP33.62■■■□□ 2.97
SMC4-206ENST00000465903 TGFB2P61812 414 aa33.62■■■□□ 2.97
SMC4-206ENST00000465903 HDGFL1Q5TGJ6 251 aa33.62■■■□□ 2.97
SMC4-206ENST00000465903 DDX21Q9NR30 783 aaKnown RBP eCLIP33.62■■■□□ 2.97
SMC4-206ENST00000465903 MAP3K15Q6ZN16 1313 aa33.61■■■□□ 2.97
SMC4-206ENST00000465903 ERVV-1B6SEH8 477 aa33.61■■■□□ 2.97
SMC4-206ENST00000465903 SETDB2Q96T68 719 aa33.6■■■□□ 2.97
SMC4-206ENST00000465903 ZNF652Q9Y2D9 606 aa33.6■■■□□ 2.97
SMC4-206ENST00000465903 BRCA1P38398 1863 aaKnown RBP33.6■■■□□ 2.97
SMC4-206ENST00000465903 TSPYL6Q8N831 410 aa33.59■■■□□ 2.97
SMC4-206ENST00000465903 CHPF2Q9P2E5 772 aa33.59■■■□□ 2.97
SMC4-206ENST00000465903 CARMIL3Q8ND23 1372 aa33.59■■■□□ 2.97
SMC4-206ENST00000465903 A0A0G2JLW4 131 aa33.58■■■□□ 2.97
SMC4-206ENST00000465903 GPR162Q16538 588 aa33.58■■■□□ 2.97
SMC4-206ENST00000465903 ANKRD31Q8N7Z5 1873 aa33.58■■■□□ 2.97
SMC4-206ENST00000465903 DPEP1P16444 411 aa33.57■■■□□ 2.96
SMC4-206ENST00000465903 YBX3P16989 372 aaKnown RBP eCLIP33.57■■■□□ 2.96
SMC4-206ENST00000465903 KIF6Q6ZMV9 814 aa33.57■■■□□ 2.96
SMC4-206ENST00000465903 SPINK5Q9NQ38 1064 aaPredicted RBP33.57■■■□□ 2.96
SMC4-206ENST00000465903 ZNF521Q96K83 1311 aa33.56■■■□□ 2.96
SMC4-206ENST00000465903 KCNA3P22001 575 aa33.56■■■□□ 2.96
SMC4-206ENST00000465903 COPS6Q7L5N1 327 aa33.56■■■□□ 2.96
SMC4-206ENST00000465903 PELP1Q8IZL8 1130 aaKnown RBP33.56■■■□□ 2.96
SMC4-206ENST00000465903 ZBTB3Q9H5J0 574 aa33.56■■■□□ 2.96
SMC4-206ENST00000465903 PRR5LQ6MZQ0 368 aa33.55■■■□□ 2.96
SMC4-206ENST00000465903 DBF4Q9UBU7 674 aaPredicted RBP33.55■■■□□ 2.96
SMC4-206ENST00000465903 NIP7Q9Y221 180 aaKnown RBP eCLIP33.55■■■□□ 2.96
SMC4-206ENST00000465903 XAGE3Q8WTP9 111 aa33.54■■■□□ 2.96
SMC4-206ENST00000465903 FANCIQ9NVI1 1328 aa33.53■■■□□ 2.96
SMC4-206ENST00000465903 WWC3Q9ULE0 1092 aa33.53■■■□□ 2.96
SMC4-206ENST00000465903 CHD4Q14839 1912 aa33.53■■■□□ 2.96
SMC4-206ENST00000465903 AIMP1Q12904 312 aaKnown RBP33.52■■■□□ 2.96
SMC4-206ENST00000465903 GIGYF2Q6Y7W6 1299 aaKnown RBP33.52■■■□□ 2.96
SMC4-206ENST00000465903 CCDC24Q8N4L8 307 aa33.52■■■□□ 2.96
SMC4-206ENST00000465903 GOLGB1Q14789 3259 aaKnown RBP33.52■■■□□ 2.96
SMC4-206ENST00000465903 ATP10DQ9P241 1426 aa33.51■■■□□ 2.95
SMC4-206ENST00000465903 CHRNA5P30532 468 aa33.5■■■□□ 2.95
SMC4-206ENST00000465903 HYPKQ9NX55 129 aa33.49■■■□□ 2.95
SMC4-206ENST00000465903 ANKRD36CQ5JPF3 1778 aa33.49■■■□□ 2.95
SMC4-206ENST00000465903 DLEC1Q9Y238 1755 aa33.49■■■□□ 2.95
SMC4-206ENST00000465903 TWISTNBQ3B726 338 aaPredicted RBP33.48■■■□□ 2.95
SMC4-206ENST00000465903 ZNF34Q8IZ26 560 aa33.48■■■□□ 2.95
SMC4-206ENST00000465903 CNBD1Q8NA66 436 aa33.48■■■□□ 2.95
SMC4-206ENST00000465903 NBPF5PQ86XG9 351 aaPredicted RBP33.47■■■□□ 2.95
SMC4-206ENST00000465903 UTRNP46939 3433 aa33.47■■■□□ 2.95
SMC4-206ENST00000465903 BRIP1Q9BX63 1249 aa33.46■■■□□ 2.95
SMC4-206ENST00000465903 UBN2Q6ZU65 1347 aa33.46■■■□□ 2.95
SMC4-206ENST00000465903 GPTP24298 496 aa33.45■■■□□ 2.95
SMC4-206ENST00000465903 EXOSC9Q06265 439 aaKnown RBP33.45■■■□□ 2.95
SMC4-206ENST00000465903 GOLGA2Q08379 1002 aa33.45■■■□□ 2.95
SMC4-206ENST00000465903 CCDC30Q5VVM6 783 aa33.45■■■□□ 2.95
SMC4-206ENST00000465903 PHAXQ9H814 394 aaKnown RBP33.45■■■□□ 2.95
SMC4-206ENST00000465903 ARFGEF1Q9Y6D6 1849 aa33.44■■■□□ 2.94
SMC4-206ENST00000465903 CACNA1FO60840 1977 aa33.44■■■□□ 2.94
SMC4-206ENST00000465903 FAM177BA6PVY3 158 aa33.44■■■□□ 2.94
SMC4-206ENST00000465903 GRIN3BO60391 1043 aa33.44■■■□□ 2.94
SMC4-206ENST00000465903 TPTE2Q6XPS3 522 aa33.44■■■□□ 2.94
SMC4-206ENST00000465903 CHMP4AQ9BY43 222 aa33.43■■■□□ 2.94
SMC4-206ENST00000465903 PIM2Q9P1W9 311 aa33.43■■■□□ 2.94
SMC4-206ENST00000465903 COL11A2P13942 1736 aaPredicted RBP33.42■■■□□ 2.94
SMC4-206ENST00000465903 SUSD4Q5VX71 490 aa33.42■■■□□ 2.94
SMC4-206ENST00000465903 ANKRD13DQ6ZTN6 518 aa33.42■■■□□ 2.94
SMC4-206ENST00000465903 PLBD2Q8NHP8 589 aa33.42■■■□□ 2.94
SMC4-206ENST00000465903 NPHP1O15259 732 aa33.41■■■□□ 2.94
SMC4-206ENST00000465903 VAMP4O75379 141 aa33.41■■■□□ 2.94
SMC4-206ENST00000465903 ST5P78524 1137 aa33.41■■■□□ 2.94
SMC4-206ENST00000465903 C2CD5Q86YS7 1000 aa33.41■■■□□ 2.94
SMC4-206ENST00000465903 MYH16Q9H6N6 1097 aa33.41■■■□□ 2.94
SMC4-206ENST00000465903 BCS1LQ9Y276 419 aa33.41■■■□□ 2.94
SMC4-206ENST00000465903 ARFGEF2Q9Y6D5 1785 aa33.41■■■□□ 2.94
SMC4-206ENST00000465903 TCERG1O14776 1098 aaKnown RBP33.4■■■□□ 2.94
SMC4-206ENST00000465903 PDE6BP35913 854 aa33.4■■■□□ 2.94
SMC4-206ENST00000465903 TCIRG1Q13488 830 aa33.4■■■□□ 2.94
SMC4-206ENST00000465903 H0YIN7 160 aa33.39■■■□□ 2.94
SMC4-206ENST00000465903 HSP90AB3PQ58FF7 597 aa33.38■■■□□ 2.93
SMC4-206ENST00000465903 IBTKQ9P2D0 1353 aaPredicted RBP33.37■■■□□ 2.93
SMC4-206ENST00000465903 NYXQ9GZU5 481 aa33.37■■■□□ 2.93
SMC4-206ENST00000465903 PDZRN3Q9UPQ7 1066 aa33.37■■■□□ 2.93
SMC4-206ENST00000465903 NTSR2O95665 410 aa33.36■■■□□ 2.93
SMC4-206ENST00000465903 PARP10Q53GL7 1025 aa33.36■■■□□ 2.93
SMC4-206ENST00000465903 DALRD3Q5D0E6 543 aaKnown RBP33.36■■■□□ 2.93
SMC4-206ENST00000465903 NUTM1Q86Y26 1132 aa33.36■■■□□ 2.93
SMC4-206ENST00000465903 ERFEQ4G0M1 354 aa33.35■■■□□ 2.93
SMC4-206ENST00000465903 KLRG2A4D1S0 409 aaPredicted RBP33.34■■■□□ 2.93
SMC4-206ENST00000465903 SLFN5Q08AF3 891 aa33.34■■■□□ 2.93
SMC4-206ENST00000465903 STK31Q9BXU1 1019 aa33.34■■■□□ 2.93
SMC4-206ENST00000465903 ABCC12Q96J65 1359 aa33.34■■■□□ 2.93
SMC4-206ENST00000465903 CACNA1SQ13698 1873 aa33.33■■■□□ 2.93
SMC4-206ENST00000465903 TNRC6CQ9HCJ0 1690 aaKnown RBP33.33■■■□□ 2.93
SMC4-206ENST00000465903 GTF2E1P29083 439 aaPredicted RBP33.33■■■□□ 2.93
SMC4-206ENST00000465903 PPP1R42Q7Z4L9 355 aa33.33■■■□□ 2.93
SMC4-206ENST00000465903 NLRP10Q86W26 655 aa33.33■■■□□ 2.93
SMC4-206ENST00000465903 ISCA1Q9BUE6 129 aa33.33■■■□□ 2.93
SMC4-206ENST00000465903 SLC4A2P04920 1241 aa33.32■■■□□ 2.92
SMC4-206ENST00000465903 SRGNP10124 158 aa33.32■■■□□ 2.92
SMC4-206ENST00000465903 G2E3Q7L622 706 aa33.32■■■□□ 2.92
SMC4-206ENST00000465903 CDCA7LQ96GN5 454 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms