RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 FAM129BQ96TA1 746 aa7□□□□□ -1.29
CDK13-203ENST00000465643 DUSP9Q99956 384 aaKnown RBP7□□□□□ -1.29
CDK13-203ENST00000465643 PARP2Q9UGN5 583 aa7□□□□□ -1.29
CDK13-203ENST00000465643 ZNF232Q9UNY5 417 aa7□□□□□ -1.29
CDK13-203ENST00000465643 ALDH1A1P00352 501 aa7□□□□□ -1.29
CDK13-203ENST00000465643 PLCB3Q01970 1234 aa7□□□□□ -1.29
CDK13-203ENST00000465643 ZNF295-AS1Q8N0V1 137 aa7□□□□□ -1.29
CDK13-203ENST00000465643 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7□□□□□ -1.29
CDK13-203ENST00000465643 CHD1O14646 1710 aa6.99□□□□□ -1.29
CDK13-203ENST00000465643 NOS2P35228 1153 aa6.99□□□□□ -1.29
CDK13-203ENST00000465643 DGKZQ13574 1117 aa6.99□□□□□ -1.29
CDK13-203ENST00000465643 ALDH16A1Q8IZ83 802 aa6.99□□□□□ -1.29
CDK13-203ENST00000465643 L3MBTL2Q969R5 705 aa6.99□□□□□ -1.29
CDK13-203ENST00000465643 NIF3L1Q9GZT8 377 aa6.99□□□□□ -1.29
CDK13-203ENST00000465643 PGPEP1Q9NXJ5 209 aa6.99□□□□□ -1.29
CDK13-203ENST00000465643 CABP1Q9NZU7 370 aa6.99□□□□□ -1.29
CDK13-203ENST00000465643 SERTM1A2A2V5 107 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 WNT7AO00755 349 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 ADH1AP07327 375 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 HDLBPQ00341 1268 aaKnown RBP6.98□□□□□ -1.29
CDK13-203ENST00000465643 CENPCQ03188 943 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 DNM1Q05193 864 aaKnown RBP6.98□□□□□ -1.29
CDK13-203ENST00000465643 NNTQ13423 1086 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 POTEGQ6S5H5 508 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 POTEAQ6S8J7 498 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 ITPKCQ96DU7 683 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 MYO19Q96H55 970 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 FHDC1Q9C0D6 1143 aaPredicted RBP6.98□□□□□ -1.29
CDK13-203ENST00000465643 HCSTQ9UBK5 93 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 EMILIN1Q9Y6C2 1016 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 GRIN2AQ12879 1464 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 RAPGEF2Q9Y4G8 1499 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 MEN1O00255 615 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 ALKBH2Q6NS38 261 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 KLRG1Q96E93 195 aa6.98□□□□□ -1.29
CDK13-203ENST00000465643 CLN3Q13286 438 aa6.97□□□□□ -1.29
CDK13-203ENST00000465643 EDEM1Q92611 657 aa6.97□□□□□ -1.29
CDK13-203ENST00000465643 ZNF395Q9H8N7 513 aaPredicted RBP6.97□□□□□ -1.29
CDK13-203ENST00000465643 ZFAND3Q9H8U3 227 aa6.97□□□□□ -1.29
CDK13-203ENST00000465643 A6NHS1 94 aa6.97□□□□□ -1.29
CDK13-203ENST00000465643 BRD2P25440 801 aaKnown RBP6.97□□□□□ -1.29
CDK13-203ENST00000465643 RELBQ01201 579 aa6.97□□□□□ -1.29
CDK13-203ENST00000465643 CITED4Q96RK1 184 aa6.97□□□□□ -1.29
CDK13-203ENST00000465643 SLC19A1P41440 591 aa6.96□□□□□ -1.29
CDK13-203ENST00000465643 XPCQ01831 940 aaPredicted RBP6.96□□□□□ -1.29
CDK13-203ENST00000465643 TEAD4Q15561 434 aa6.96□□□□□ -1.29
CDK13-203ENST00000465643 ABTB2Q8N961 1025 aa6.96□□□□□ -1.29
CDK13-203ENST00000465643 DMRTB1Q96MA1 342 aa6.96□□□□□ -1.29
CDK13-203ENST00000465643 PHACTR1Q9C0D0 580 aa6.96□□□□□ -1.29
CDK13-203ENST00000465643 CHMP3Q9Y3E7 222 aa6.96□□□□□ -1.29
CDK13-203ENST00000465643 PRXQ9BXM0 1461 aa6.96□□□□□ -1.3
CDK13-203ENST00000465643 PNMA6FA0A0J9YX94 578 aa6.96□□□□□ -1.3
CDK13-203ENST00000465643 PRPF40AO75400 957 aaKnown RBP6.96□□□□□ -1.3
CDK13-203ENST00000465643 ERCC5P28715 1186 aaPredicted RBP6.96□□□□□ -1.3
CDK13-203ENST00000465643 TXLNAP40222 546 aa6.96□□□□□ -1.3
CDK13-203ENST00000465643 ZAP70P43403 619 aa6.96□□□□□ -1.3
CDK13-203ENST00000465643 FOXC1Q12948 553 aa6.96□□□□□ -1.3
CDK13-203ENST00000465643 GJD3Q8N144 294 aa6.96□□□□□ -1.3
CDK13-203ENST00000465643 NAALADL2Q58DX5 795 aa6.95□□□□□ -1.3
CDK13-203ENST00000465643 TMEM87AQ8NBN3 555 aa6.95□□□□□ -1.3
CDK13-203ENST00000465643 RNF166Q96A37 237 aaPredicted RBP6.95□□□□□ -1.3
CDK13-203ENST00000465643 IFT43Q96FT9 208 aa6.95□□□□□ -1.3
CDK13-203ENST00000465643 KLF16Q9BXK1 252 aaPredicted RBP6.95□□□□□ -1.3
CDK13-203ENST00000465643 BCS1LQ9Y276 419 aa6.95□□□□□ -1.3
CDK13-203ENST00000465643 ZIC2O95409 532 aaPredicted RBP6.95□□□□□ -1.3
CDK13-203ENST00000465643 PDGFAP04085 211 aa6.95□□□□□ -1.3
CDK13-203ENST00000465643 PTGIRP43119 386 aa6.95□□□□□ -1.3
CDK13-203ENST00000465643 ZC3H6P61129 1189 aaKnown RBP6.95□□□□□ -1.3
CDK13-203ENST00000465643 ORC1Q13415 861 aa6.95□□□□□ -1.3
CDK13-203ENST00000465643 C11orf91Q3C1V1 193 aa6.95□□□□□ -1.3
CDK13-203ENST00000465643 C8orf37Q96NL8 207 aa6.95□□□□□ -1.3
CDK13-203ENST00000465643 CFHR5Q9BXR6 569 aa6.95□□□□□ -1.3
CDK13-203ENST00000465643 HIRAP54198 1017 aaPredicted RBP6.94□□□□□ -1.3
CDK13-203ENST00000465643 RTN1Q16799 776 aa6.94□□□□□ -1.3
CDK13-203ENST00000465643 Q6ZVU0 165 aa6.94□□□□□ -1.3
CDK13-203ENST00000465643 GPR152Q8TDT2 470 aa6.94□□□□□ -1.3
CDK13-203ENST00000465643 PPP1R1BQ9UD71 204 aaPredicted RBP6.94□□□□□ -1.3
CDK13-203ENST00000465643 GOLGA3Q08378 1498 aa6.94□□□□□ -1.3
CDK13-203ENST00000465643 KIF21BO75037 1637 aa6.94□□□□□ -1.3
CDK13-203ENST00000465643 J3QL48 77 aa6.94□□□□□ -1.3
CDK13-203ENST00000465643 SCAMP3O14828 347 aaKnown RBP6.94□□□□□ -1.3
CDK13-203ENST00000465643 DAB2P98082 770 aa6.94□□□□□ -1.3
CDK13-203ENST00000465643 PDE3BQ13370 1112 aa6.94□□□□□ -1.3
CDK13-203ENST00000465643 CEP170Q5SW79 1584 aa6.94□□□□□ -1.3
CDK13-203ENST00000465643 TMC4Q7Z404 712 aa6.94□□□□□ -1.3
CDK13-203ENST00000465643 PPARGC1BQ86YN6 1023 aaKnown RBP6.94□□□□□ -1.3
CDK13-203ENST00000465643 ALKBH8Q96BT7 664 aaKnown RBP6.94□□□□□ -1.3
CDK13-203ENST00000465643 ZSCAN10Q96SZ4 725 aaPredicted RBP6.94□□□□□ -1.3
CDK13-203ENST00000465643 GGNBP2Q9H3C7 697 aa6.94□□□□□ -1.3
CDK13-203ENST00000465643 MRS2Q9HD23 443 aa6.94□□□□□ -1.3
CDK13-203ENST00000465643 WASF2Q9Y6W5 498 aa6.94□□□□□ -1.3
CDK13-203ENST00000465643 MZF1P28698 734 aaPredicted RBP6.93□□□□□ -1.3
CDK13-203ENST00000465643 RAD51AP2Q09MP3 1159 aa6.93□□□□□ -1.3
CDK13-203ENST00000465643 ENOX2Q16206 610 aaKnown RBP6.93□□□□□ -1.3
CDK13-203ENST00000465643 SPRYD7Q5W111 196 aa6.93□□□□□ -1.3
CDK13-203ENST00000465643 METTL16Q86W50 562 aaKnown RBP6.93□□□□□ -1.3
CDK13-203ENST00000465643 TRIM52Q96A61 297 aa6.93□□□□□ -1.3
CDK13-203ENST00000465643 NUDT16Q96DE0 195 aaKnown RBP6.93□□□□□ -1.3
CDK13-203ENST00000465643 NLRP3Q96P20 1036 aa6.93□□□□□ -1.3
CDK13-203ENST00000465643 NUP160Q12769 1436 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms