RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 TRIM35Q9UPQ4 493 aa20.32■□□□□ 0.84
SCAP-209ENST00000465628 ANKRD31Q8N7Z5 1873 aa20.31■□□□□ 0.84
SCAP-209ENST00000465628 FAM177BA6PVY3 158 aa20.31■□□□□ 0.84
SCAP-209ENST00000465628 KCNA3P22001 575 aa20.31■□□□□ 0.84
SCAP-209ENST00000465628 PRR5LQ6MZQ0 368 aa20.31■□□□□ 0.84
SCAP-209ENST00000465628 CLEC4GQ6UXB4 293 aa20.31■□□□□ 0.84
SCAP-209ENST00000465628 NIP7Q9Y221 180 aaKnown RBP eCLIP20.31■□□□□ 0.84
SCAP-209ENST00000465628 COL11A2P13942 1736 aaPredicted RBP20.3■□□□□ 0.84
SCAP-209ENST00000465628 PDE6BP35913 854 aa20.3■□□□□ 0.84
SCAP-209ENST00000465628 ZNF526Q8TF50 670 aaPredicted RBP20.3■□□□□ 0.84
SCAP-209ENST00000465628 NECTIN2Q92692 538 aa20.3■□□□□ 0.84
SCAP-209ENST00000465628 ERBB4Q15303 1308 aa20.29■□□□□ 0.84
SCAP-209ENST00000465628 ZNF622Q969S3 477 aaKnown RBP eCLIP20.29■□□□□ 0.84
SCAP-209ENST00000465628 CALD1Q05682 793 aaKnown RBP20.28■□□□□ 0.84
SCAP-209ENST00000465628 CCDC184Q52MB2 194 aa20.28■□□□□ 0.84
SCAP-209ENST00000465628 BRIP1Q9BX63 1249 aa20.28■□□□□ 0.84
SCAP-209ENST00000465628 ZBTB3Q9H5J0 574 aa20.28■□□□□ 0.84
SCAP-209ENST00000465628 CACNA1SQ13698 1873 aa20.28■□□□□ 0.84
SCAP-209ENST00000465628 MAP3K15Q6ZN16 1313 aa20.27■□□□□ 0.84
SCAP-209ENST00000465628 GTF2E1P29083 439 aaPredicted RBP20.27■□□□□ 0.84
SCAP-209ENST00000465628 TTLL7Q6ZT98 887 aa20.27■□□□□ 0.84
SCAP-209ENST00000465628 TTLL6Q8N841 843 aa20.27■□□□□ 0.84
SCAP-209ENST00000465628 PDZRN3Q9UPQ7 1066 aa20.27■□□□□ 0.84
SCAP-209ENST00000465628 NUP98P52948 1817 aa20.27■□□□□ 0.84
SCAP-209ENST00000465628 ADCY9O60503 1353 aa20.26■□□□□ 0.83
SCAP-209ENST00000465628 CHL1O00533 1208 aa20.26■□□□□ 0.83
SCAP-209ENST00000465628 HLFQ16534 295 aa20.26■□□□□ 0.83
SCAP-209ENST00000465628 GPBP1L1Q9HC44 474 aaPredicted RBP20.26■□□□□ 0.83
SCAP-209ENST00000465628 RGL2O15211 777 aa20.25■□□□□ 0.83
SCAP-209ENST00000465628 ANXA1P04083 346 aa20.25■□□□□ 0.83
SCAP-209ENST00000465628 KRT24Q2M2I5 525 aa20.25■□□□□ 0.83
SCAP-209ENST00000465628 SENP3-EIF4A1A0A087X0R7 540 aa20.24■□□□□ 0.83
SCAP-209ENST00000465628 ERVV-1B6SEH8 477 aa20.24■□□□□ 0.83
SCAP-209ENST00000465628 GPTP24298 496 aa20.24■□□□□ 0.83
SCAP-209ENST00000465628 HDGFL1Q5TGJ6 251 aa20.24■□□□□ 0.83
SCAP-209ENST00000465628 TPTE2Q6XPS3 522 aa20.24■□□□□ 0.83
SCAP-209ENST00000465628 CFAP44Q96MT7 982 aa20.24■□□□□ 0.83
SCAP-209ENST00000465628 PROSER3Q2NL68 480 aa20.23■□□□□ 0.83
SCAP-209ENST00000465628 NYXQ9GZU5 481 aa20.23■□□□□ 0.83
SCAP-209ENST00000465628 MBIPQ9NS73 344 aa20.23■□□□□ 0.83
SCAP-209ENST00000465628 IFT57Q9NWB7 429 aa20.23■□□□□ 0.83
SCAP-209ENST00000465628 ZNF219Q9P2Y4 722 aaPredicted RBP20.23■□□□□ 0.83
SCAP-209ENST00000465628 GNAI1P63096 354 aa20.22■□□□□ 0.83
SCAP-209ENST00000465628 AIMP1Q12904 312 aaKnown RBP20.22■□□□□ 0.83
SCAP-209ENST00000465628 C9orf131Q5VYM1 1079 aa20.22■□□□□ 0.83
SCAP-209ENST00000465628 RNF181Q9P0P0 153 aa20.22■□□□□ 0.83
SCAP-209ENST00000465628 CHPF2Q9P2E5 772 aa20.21■□□□□ 0.83
SCAP-209ENST00000465628 RASSF7Q02833 373 aa20.2■□□□□ 0.82
SCAP-209ENST00000465628 CNKSR1Q969H4 720 aa20.2■□□□□ 0.82
SCAP-209ENST00000465628 MASTLQ96GX5 879 aa20.2■□□□□ 0.82
SCAP-209ENST00000465628 ANKRD36CQ5JPF3 1778 aa20.19■□□□□ 0.82
SCAP-209ENST00000465628 ARFGEF2Q9Y6D5 1785 aa20.19■□□□□ 0.82
SCAP-209ENST00000465628 HOXB7P09629 217 aa20.19■□□□□ 0.82
SCAP-209ENST00000465628 DUSP27Q5VZP5 1158 aa20.19■□□□□ 0.82
SCAP-209ENST00000465628 STYK1Q6J9G0 422 aa20.19■□□□□ 0.82
SCAP-209ENST00000465628 NUTM1Q86Y26 1132 aa20.19■□□□□ 0.82
SCAP-209ENST00000465628 XAGE3Q8WTP9 111 aa20.19■□□□□ 0.82
SCAP-209ENST00000465628 TNRC6CQ9HCJ0 1690 aaKnown RBP20.19■□□□□ 0.82
SCAP-209ENST00000465628 C21orf2O43822 256 aa20.18■□□□□ 0.82
SCAP-209ENST00000465628 SRGNP10124 158 aa20.18■□□□□ 0.82
SCAP-209ENST00000465628 PDIA6Q15084 440 aa20.18■□□□□ 0.82
SCAP-209ENST00000465628 PRPF40BQ6NWY9 871 aaKnown RBP20.18■□□□□ 0.82
SCAP-209ENST00000465628 COPS6Q7L5N1 327 aa20.18■□□□□ 0.82
SCAP-209ENST00000465628 DDX21Q9NR30 783 aaKnown RBP eCLIP20.18■□□□□ 0.82
SCAP-209ENST00000465628 ABCC12Q96J65 1359 aa20.18■□□□□ 0.82
SCAP-209ENST00000465628 GIGYF2Q6Y7W6 1299 aaKnown RBP20.17■□□□□ 0.82
SCAP-209ENST00000465628 UBN2Q6ZU65 1347 aa20.17■□□□□ 0.82
SCAP-209ENST00000465628 IBTKQ9P2D0 1353 aaPredicted RBP20.17■□□□□ 0.82
SCAP-209ENST00000465628 TIAM2Q8IVF5 1701 aa20.16■□□□□ 0.82
SCAP-209ENST00000465628 ELL2O00472 640 aaPredicted RBP20.16■□□□□ 0.82
SCAP-209ENST00000465628 NPR1P16066 1061 aa20.16■□□□□ 0.82
SCAP-209ENST00000465628 HSP90AB3PQ58FF7 597 aa20.16■□□□□ 0.82
SCAP-209ENST00000465628 PPP1R42Q7Z4L9 355 aa20.16■□□□□ 0.82
SCAP-209ENST00000465628 DBF4Q9UBU7 674 aaPredicted RBP20.16■□□□□ 0.82
SCAP-209ENST00000465628 SLX4Q8IY92 1834 aa20.16■□□□□ 0.82
SCAP-209ENST00000465628 SBF1O95248 1867 aa20.16■□□□□ 0.82
SCAP-209ENST00000465628 LMNB1P20700 586 aa20.15■□□□□ 0.82
SCAP-209ENST00000465628 ERFEQ4G0M1 354 aa20.15■□□□□ 0.82
SCAP-209ENST00000465628 PARP10Q53GL7 1025 aa20.15■□□□□ 0.82
SCAP-209ENST00000465628 LRP10Q7Z4F1 713 aa20.15■□□□□ 0.82
SCAP-209ENST00000465628 SALL2Q9Y467 1007 aaPredicted RBP20.15■□□□□ 0.82
SCAP-209ENST00000465628 ZNF853P0CG23 659 aa20.14■□□□□ 0.81
SCAP-209ENST00000465628 C1QTNF8P60827 252 aa20.14■□□□□ 0.81
SCAP-209ENST00000465628 SOGA3Q5TF21 947 aa20.14■□□□□ 0.81
SCAP-209ENST00000465628 SUSD4Q5VX71 490 aa20.14■□□□□ 0.81
SCAP-209ENST00000465628 FAM9BQ8IZU0 186 aa20.14■□□□□ 0.81
SCAP-209ENST00000465628 RPGRQ92834 1020 aaKnown RBP20.14■□□□□ 0.81
SCAP-209ENST00000465628 CCDC88AQ3V6T2 1871 aa20.13■□□□□ 0.81
SCAP-209ENST00000465628 ZNF34Q8IZ26 560 aa20.13■□□□□ 0.81
SCAP-209ENST00000465628 UTP14AQ9BVJ6 771 aaKnown RBP20.13■□□□□ 0.81
SCAP-209ENST00000465628 TAOK3Q9H2K8 898 aa20.13■□□□□ 0.81
SCAP-209ENST00000465628 TSR2Q969E8 191 aaKnown RBP20.12■□□□□ 0.81
SCAP-209ENST00000465628 HYPKQ9NX55 129 aa20.12■□□□□ 0.81
SCAP-209ENST00000465628 FER1L6Q2WGJ9 1857 aa20.11■□□□□ 0.81
SCAP-209ENST00000465628 KDM2BQ8NHM5 1336 aa20.11■□□□□ 0.81
SCAP-209ENST00000465628 NFKBIEO00221 500 aa20.11■□□□□ 0.81
SCAP-209ENST00000465628 NTSR2O95665 410 aa20.11■□□□□ 0.81
SCAP-209ENST00000465628 GOLGA2Q08379 1002 aa20.11■□□□□ 0.81
SCAP-209ENST00000465628 CCDC27Q2M243 656 aa20.11■□□□□ 0.81
SCAP-209ENST00000465628 CCDC93Q567U6 631 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms