RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 SRGNP10124 158 aa27.6■■■□□ 2.01
CSPG5-204ENST00000465441 APLP1P51693 650 aa27.6■■■□□ 2.01
CSPG5-204ENST00000465441 NBPF5PQ86XG9 351 aaPredicted RBP27.6■■■□□ 2.01
CSPG5-204ENST00000465441 CNKSR1Q969H4 720 aa27.6■■■□□ 2.01
CSPG5-204ENST00000465441 CEP350Q5VT06 3117 aa27.6■■■□□ 2.01
CSPG5-204ENST00000465441 GLTPD2A6NH11 291 aa27.59■■■□□ 2.01
CSPG5-204ENST00000465441 EIF4A1P60842 406 aaKnown RBP27.59■■■□□ 2.01
CSPG5-204ENST00000465441 STYK1Q6J9G0 422 aa27.59■■■□□ 2.01
CSPG5-204ENST00000465441 MASTLQ96GX5 879 aa27.59■■■□□ 2.01
CSPG5-204ENST00000465441 NIP7Q9Y221 180 aaKnown RBP eCLIP27.59■■■□□ 2.01
CSPG5-204ENST00000465441 DLG5Q8TDM6 1919 aa27.59■■■□□ 2.01
CSPG5-204ENST00000465441 BCORQ6W2J9 1755 aa27.58■■■□□ 2.01
CSPG5-204ENST00000465441 HLFQ16534 295 aa27.58■■■□□ 2.01
CSPG5-204ENST00000465441 RGL2O15211 777 aa27.57■■■□□ 2
CSPG5-204ENST00000465441 RALBP1Q15311 655 aa27.57■■■□□ 2
CSPG5-204ENST00000465441 TPTE2Q6XPS3 522 aa27.57■■■□□ 2
CSPG5-204ENST00000465441 NGEFQ8N5V2 710 aa27.57■■■□□ 2
CSPG5-204ENST00000465441 MAPK8IP3Q9UPT6 1336 aa27.57■■■□□ 2
CSPG5-204ENST00000465441 CCDC88AQ3V6T2 1871 aa27.56■■■□□ 2
CSPG5-204ENST00000465441 FAM177BA6PVY3 158 aa27.55■■■□□ 2
CSPG5-204ENST00000465441 FSTL1Q12841 308 aa27.55■■■□□ 2
CSPG5-204ENST00000465441 RRP7AQ9Y3A4 280 aaKnown RBP27.55■■■□□ 2
CSPG5-204ENST00000465441 COL11A2P13942 1736 aaPredicted RBP27.54■■■□□ 2
CSPG5-204ENST00000465441 DDX10Q13206 875 aaKnown RBP27.54■■■□□ 2
CSPG5-204ENST00000465441 PRPF40BQ6NWY9 871 aaKnown RBP27.54■■■□□ 2
CSPG5-204ENST00000465441 DNAJC5GQ8N7S2 189 aa27.53■■■□□ 2
CSPG5-204ENST00000465441 KLRG2A4D1S0 409 aaPredicted RBP27.52■■■□□ 2
CSPG5-204ENST00000465441 VEGFAP15692 232 aaPredicted RBP27.52■■■□□ 2
CSPG5-204ENST00000465441 RIPK4P57078 832 aa27.52■■■□□ 2
CSPG5-204ENST00000465441 SLX4Q8IY92 1834 aa27.52■■■□□ 2
CSPG5-204ENST00000465441 ERFEQ4G0M1 354 aa27.51■■□□□ 1.99
CSPG5-204ENST00000465441 ERVV-1B6SEH8 477 aa27.5■■□□□ 1.99
CSPG5-204ENST00000465441 NPR1P16066 1061 aa27.5■■□□□ 1.99
CSPG5-204ENST00000465441 DPY19L2Q6NUT2 758 aa27.5■■□□□ 1.99
CSPG5-204ENST00000465441 TTLL7Q6ZT98 887 aa27.5■■□□□ 1.99
CSPG5-204ENST00000465441 C7orf43Q8WVR3 580 aa27.5■■□□□ 1.99
CSPG5-204ENST00000465441 TAOK3Q9H2K8 898 aa27.5■■□□□ 1.99
CSPG5-204ENST00000465441 KDM3BQ7LBC6 1761 aa27.5■■□□□ 1.99
CSPG5-204ENST00000465441 LTBP3Q9NS15 1303 aa27.49■■□□□ 1.99
CSPG5-204ENST00000465441 POTECB2RU33 542 aa27.49■■□□□ 1.99
CSPG5-204ENST00000465441 MYL6BP14649 208 aa27.49■■□□□ 1.99
CSPG5-204ENST00000465441 SOGA3Q5TF21 947 aa27.49■■□□□ 1.99
CSPG5-204ENST00000465441 FER1L6Q2WGJ9 1857 aa27.49■■□□□ 1.99
CSPG5-204ENST00000465441 GTF2E1P29083 439 aaPredicted RBP27.48■■□□□ 1.99
CSPG5-204ENST00000465441 TSPYL4Q9UJ04 414 aa27.48■■□□□ 1.99
CSPG5-204ENST00000465441 TNRC6CQ9HCJ0 1690 aaKnown RBP27.48■■□□□ 1.99
CSPG5-204ENST00000465441 MAP3K15Q6ZN16 1313 aa27.47■■□□□ 1.99
CSPG5-204ENST00000465441 TMPOP42166 694 aaKnown RBP27.47■■□□□ 1.99
CSPG5-204ENST00000465441 HTRA3P83110 453 aa27.47■■□□□ 1.99
CSPG5-204ENST00000465441 SMC1BQ8NDV3 1235 aa27.47■■□□□ 1.99
CSPG5-204ENST00000465441 LAMB4A4D0S4 1761 aa27.45■■□□□ 1.99
CSPG5-204ENST00000465441 KIF6Q6ZMV9 814 aa27.45■■□□□ 1.98
CSPG5-204ENST00000465441 NUTM1Q86Y26 1132 aa27.44■■□□□ 1.98
CSPG5-204ENST00000465441 ZBTB3Q9H5J0 574 aa27.44■■□□□ 1.98
CSPG5-204ENST00000465441 CACNA1SQ13698 1873 aa27.44■■□□□ 1.98
CSPG5-204ENST00000465441 CCDC93Q567U6 631 aa27.43■■□□□ 1.98
CSPG5-204ENST00000465441 NYXQ9GZU5 481 aa27.43■■□□□ 1.98
CSPG5-204ENST00000465441 TIAM2Q8IVF5 1701 aa27.43■■□□□ 1.98
CSPG5-204ENST00000465441 MYBBP1AQ9BQG0 1328 aaKnown RBP27.42■■□□□ 1.98
CSPG5-204ENST00000465441 DICER1Q9UPY3 1922 aaKnown RBP27.42■■□□□ 1.98
CSPG5-204ENST00000465441 EIF2S2P20042 333 aaKnown RBP27.42■■□□□ 1.98
CSPG5-204ENST00000465441 ALDH1B1P30837 517 aa27.42■■□□□ 1.98
CSPG5-204ENST00000465441 OLFM4Q6UX06 510 aa27.42■■□□□ 1.98
CSPG5-204ENST00000465441 BABAM1Q9NWV8 329 aa27.42■■□□□ 1.98
CSPG5-204ENST00000465441 ERBB4Q15303 1308 aa27.41■■□□□ 1.98
CSPG5-204ENST00000465441 DDNO94850 711 aaPredicted RBP27.41■■□□□ 1.98
CSPG5-204ENST00000465441 GPTP24298 496 aa27.41■■□□□ 1.98
CSPG5-204ENST00000465441 NUP98P52948 1817 aa27.4■■□□□ 1.98
CSPG5-204ENST00000465441 PDIA6Q15084 440 aa27.4■■□□□ 1.98
CSPG5-204ENST00000465441 NEUROD2Q15784 382 aa27.4■■□□□ 1.98
CSPG5-204ENST00000465441 SUSD4Q5VX71 490 aa27.4■■□□□ 1.98
CSPG5-204ENST00000465441 CCDC146Q8IYE0 955 aa27.4■■□□□ 1.98
CSPG5-204ENST00000465441 ZNF34Q8IZ26 560 aa27.4■■□□□ 1.98
CSPG5-204ENST00000465441 ARFGEF2Q9Y6D5 1785 aa27.4■■□□□ 1.98
CSPG5-204ENST00000465441 FKBP4Q02790 459 aaKnown RBP eCLIP27.39■■□□□ 1.98
CSPG5-204ENST00000465441 LMOD3Q0VAK6 560 aa27.39■■□□□ 1.98
CSPG5-204ENST00000465441 GIGYF2Q6Y7W6 1299 aaKnown RBP27.39■■□□□ 1.98
CSPG5-204ENST00000465441 LRP10Q7Z4F1 713 aa27.39■■□□□ 1.98
CSPG5-204ENST00000465441 UBN2Q6ZU65 1347 aa27.39■■□□□ 1.97
CSPG5-204ENST00000465441 WDR90Q96KV7 1748 aa27.38■■□□□ 1.97
CSPG5-204ENST00000465441 RTKN2Q8IZC4 609 aa27.38■■□□□ 1.97
CSPG5-204ENST00000465441 ABCC12Q96J65 1359 aa27.37■■□□□ 1.97
CSPG5-204ENST00000465441 CRY2Q49AN0 593 aa27.37■■□□□ 1.97
CSPG5-204ENST00000465441 KLRG1Q96E93 195 aa27.37■■□□□ 1.97
CSPG5-204ENST00000465441 ANXA1P04083 346 aa27.36■■□□□ 1.97
CSPG5-204ENST00000465441 ZNF277Q9NRM2 450 aaPredicted RBP27.36■■□□□ 1.97
CSPG5-204ENST00000465441 PROSER3Q2NL68 480 aa27.35■■□□□ 1.97
CSPG5-204ENST00000465441 SYNE4Q8N205 404 aa27.35■■□□□ 1.97
CSPG5-204ENST00000465441 RUNDC1Q96C34 613 aa27.35■■□□□ 1.97
CSPG5-204ENST00000465441 IFFO2Q5TF58 517 aa27.34■■□□□ 1.97
CSPG5-204ENST00000465441 ADAMTS8Q9UP79 889 aa27.34■■□□□ 1.97
CSPG5-204ENST00000465441 TRIM35Q9UPQ4 493 aa27.34■■□□□ 1.97
CSPG5-204ENST00000465441 NTSR2O95665 410 aa27.33■■□□□ 1.97
CSPG5-204ENST00000465441 HOXA10P31260 410 aaPredicted RBP27.33■■□□□ 1.97
CSPG5-204ENST00000465441 WDR43Q15061 677 aaKnown RBP eCLIP27.33■■□□□ 1.97
CSPG5-204ENST00000465441 PPP1R42Q7Z4L9 355 aa27.33■■□□□ 1.97
CSPG5-204ENST00000465441 NECTIN2Q92692 538 aa27.33■■□□□ 1.97
CSPG5-204ENST00000465441 CHL1O00533 1208 aa27.32■■□□□ 1.96
CSPG5-204ENST00000465441 RPGRQ92834 1020 aaKnown RBP27.32■■□□□ 1.96
CSPG5-204ENST00000465441 IBTKQ9P2D0 1353 aaPredicted RBP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms