RNA–Protein interactions for RNA: ENST00000465415.1

CNKSR1-203, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-203ENST00000465415 MAP3K15Q6ZN16 1313 aa16.29■□□□□ 0.2
CNKSR1-203ENST00000465415 PDIA6Q15084 440 aa16.29■□□□□ 0.2
CNKSR1-203ENST00000465415 PROSER3Q2NL68 480 aa16.29■□□□□ 0.2
CNKSR1-203ENST00000465415 TTLL7Q6ZT98 887 aa16.29■□□□□ 0.2
CNKSR1-203ENST00000465415 WWC3Q9ULE0 1092 aa16.29■□□□□ 0.2
CNKSR1-203ENST00000465415 A0A0G2JLW4 131 aa16.28■□□□□ 0.2
CNKSR1-203ENST00000465415 ANXA1P04083 346 aa16.28■□□□□ 0.2
CNKSR1-203ENST00000465415 YBX3P16989 372 aaKnown RBP eCLIP16.28■□□□□ 0.2
CNKSR1-203ENST00000465415 DIEXFQ68CQ4 756 aaKnown RBP16.28■□□□□ 0.2
CNKSR1-203ENST00000465415 LRP10Q7Z4F1 713 aa16.28■□□□□ 0.2
CNKSR1-203ENST00000465415 TSR2Q969E8 191 aaKnown RBP16.28■□□□□ 0.2
CNKSR1-203ENST00000465415 DDX21Q9NR30 783 aaKnown RBP eCLIP16.28■□□□□ 0.2
CNKSR1-203ENST00000465415 N4BP2Q86UW6 1770 aaPredicted RBP16.28■□□□□ 0.2
CNKSR1-203ENST00000465415 ERVV-1B6SEH8 477 aa16.27■□□□□ 0.2
CNKSR1-203ENST00000465415 NPHP1O15259 732 aa16.27■□□□□ 0.2
CNKSR1-203ENST00000465415 DPEP1P16444 411 aa16.27■□□□□ 0.2
CNKSR1-203ENST00000465415 HLFQ16534 295 aa16.27■□□□□ 0.2
CNKSR1-203ENST00000465415 CNBD1Q8NA66 436 aa16.27■□□□□ 0.2
CNKSR1-203ENST00000465415 ZBTB3Q9H5J0 574 aa16.27■□□□□ 0.2
CNKSR1-203ENST00000465415 CHPF2Q9P2E5 772 aa16.27■□□□□ 0.2
CNKSR1-203ENST00000465415 NIP7Q9Y221 180 aaKnown RBP eCLIP16.27■□□□□ 0.2
CNKSR1-203ENST00000465415 ATP10DQ9P241 1426 aa16.27■□□□□ 0.19
CNKSR1-203ENST00000465415 GOLGB1Q14789 3259 aaKnown RBP16.27■□□□□ 0.19
CNKSR1-203ENST00000465415 PRR5LQ6MZQ0 368 aa16.26■□□□□ 0.19
CNKSR1-203ENST00000465415 WDR63Q8IWG1 891 aa16.26■□□□□ 0.19
CNKSR1-203ENST00000465415 ELL2O00472 640 aaPredicted RBP16.25■□□□□ 0.19
CNKSR1-203ENST00000465415 GRIN3BO60391 1043 aa16.25■□□□□ 0.19
CNKSR1-203ENST00000465415 NBPF5PQ86XG9 351 aaPredicted RBP16.25■□□□□ 0.19
CNKSR1-203ENST00000465415 C8orf58Q8NAV2 365 aa16.25■□□□□ 0.19
CNKSR1-203ENST00000465415 DBF4Q9UBU7 674 aaPredicted RBP16.25■□□□□ 0.19
CNKSR1-203ENST00000465415 FANCIQ9NVI1 1328 aa16.24■□□□□ 0.19
CNKSR1-203ENST00000465415 CHRNA5P30532 468 aa16.24■□□□□ 0.19
CNKSR1-203ENST00000465415 ST5P78524 1137 aa16.24■□□□□ 0.19
CNKSR1-203ENST00000465415 AIMP1Q12904 312 aaKnown RBP16.24■□□□□ 0.19
CNKSR1-203ENST00000465415 COPS6Q7L5N1 327 aa16.24■□□□□ 0.19
CNKSR1-203ENST00000465415 XAGE3Q8WTP9 111 aa16.24■□□□□ 0.19
CNKSR1-203ENST00000465415 KCNA3P22001 575 aa16.23■□□□□ 0.19
CNKSR1-203ENST00000465415 GIGYF2Q6Y7W6 1299 aaKnown RBP16.23■□□□□ 0.19
CNKSR1-203ENST00000465415 CCDC24Q8N4L8 307 aa16.23■□□□□ 0.19
CNKSR1-203ENST00000465415 BCS1LQ9Y276 419 aa16.23■□□□□ 0.19
CNKSR1-203ENST00000465415 BRCA1P38398 1863 aaKnown RBP16.22■□□□□ 0.19
CNKSR1-203ENST00000465415 FAM177BA6PVY3 158 aa16.22■□□□□ 0.19
CNKSR1-203ENST00000465415 GPTP24298 496 aa16.22■□□□□ 0.19
CNKSR1-203ENST00000465415 TSPYL6Q8N831 410 aa16.22■□□□□ 0.19
CNKSR1-203ENST00000465415 BRIP1Q9BX63 1249 aa16.22■□□□□ 0.19
CNKSR1-203ENST00000465415 CHMP4AQ9BY43 222 aa16.22■□□□□ 0.19
CNKSR1-203ENST00000465415 HYPKQ9NX55 129 aa16.22■□□□□ 0.19
CNKSR1-203ENST00000465415 PIM2Q9P1W9 311 aa16.22■□□□□ 0.19
CNKSR1-203ENST00000465415 ANKRD31Q8N7Z5 1873 aa16.22■□□□□ 0.19
CNKSR1-203ENST00000465415 NUP98P52948 1817 aa16.22■□□□□ 0.19
CNKSR1-203ENST00000465415 UBN2Q6ZU65 1347 aa16.21■□□□□ 0.19
CNKSR1-203ENST00000465415 DLEC1Q9Y238 1755 aa16.21■□□□□ 0.19
CNKSR1-203ENST00000465415 UTRNP46939 3433 aa16.21■□□□□ 0.19
CNKSR1-203ENST00000465415 PDE6BP35913 854 aa16.21■□□□□ 0.19
CNKSR1-203ENST00000465415 TWISTNBQ3B726 338 aaPredicted RBP16.21■□□□□ 0.19
CNKSR1-203ENST00000465415 TPTE2Q6XPS3 522 aa16.21■□□□□ 0.19
CNKSR1-203ENST00000465415 C2CD5Q86YS7 1000 aa16.21■□□□□ 0.19
CNKSR1-203ENST00000465415 IBTKQ9P2D0 1353 aaPredicted RBP16.21■□□□□ 0.19
CNKSR1-203ENST00000465415 COL11A2P13942 1736 aaPredicted RBP16.2■□□□□ 0.18
CNKSR1-203ENST00000465415 H0YIN7 160 aa16.2■□□□□ 0.18
CNKSR1-203ENST00000465415 DALRD3Q5D0E6 543 aaKnown RBP16.2■□□□□ 0.18
CNKSR1-203ENST00000465415 CCDC30Q5VVM6 783 aa16.2■□□□□ 0.18
CNKSR1-203ENST00000465415 MIER1Q8N108 512 aa16.2■□□□□ 0.18
CNKSR1-203ENST00000465415 NYXQ9GZU5 481 aa16.2■□□□□ 0.18
CNKSR1-203ENST00000465415 MYH16Q9H6N6 1097 aa16.2■□□□□ 0.18
CNKSR1-203ENST00000465415 PDZRN3Q9UPQ7 1066 aa16.2■□□□□ 0.18
CNKSR1-203ENST00000465415 ZNF521Q96K83 1311 aa16.19■□□□□ 0.18
CNKSR1-203ENST00000465415 GTF2E1P29083 439 aaPredicted RBP16.19■□□□□ 0.18
CNKSR1-203ENST00000465415 GOLGA2Q08379 1002 aa16.19■□□□□ 0.18
CNKSR1-203ENST00000465415 HSP90AB3PQ58FF7 597 aa16.19■□□□□ 0.18
CNKSR1-203ENST00000465415 ZNF34Q8IZ26 560 aa16.19■□□□□ 0.18
CNKSR1-203ENST00000465415 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
CNKSR1-203ENST00000465415 ANKRD36CQ5JPF3 1778 aa16.18■□□□□ 0.18
CNKSR1-203ENST00000465415 ABCC12Q96J65 1359 aa16.18■□□□□ 0.18
CNKSR1-203ENST00000465415 PARP10Q53GL7 1025 aa16.18■□□□□ 0.18
CNKSR1-203ENST00000465415 PLBD2Q8NHP8 589 aa16.18■□□□□ 0.18
CNKSR1-203ENST00000465415 STK31Q9BXU1 1019 aa16.18■□□□□ 0.18
CNKSR1-203ENST00000465415 SUSD4Q5VX71 490 aa16.17■□□□□ 0.18
CNKSR1-203ENST00000465415 ANKRD13DQ6ZTN6 518 aa16.17■□□□□ 0.18
CNKSR1-203ENST00000465415 CHD4Q14839 1912 aa16.17■□□□□ 0.18
CNKSR1-203ENST00000465415 ARFGEF1Q9Y6D6 1849 aa16.17■□□□□ 0.18
CNKSR1-203ENST00000465415 TNRC6CQ9HCJ0 1690 aaKnown RBP16.16■□□□□ 0.18
CNKSR1-203ENST00000465415 NTSR2O95665 410 aa16.16■□□□□ 0.18
CNKSR1-203ENST00000465415 EXOSC9Q06265 439 aaKnown RBP16.16■□□□□ 0.18
CNKSR1-203ENST00000465415 TCIRG1Q13488 830 aa16.16■□□□□ 0.18
CNKSR1-203ENST00000465415 PPP1R42Q7Z4L9 355 aa16.16■□□□□ 0.18
CNKSR1-203ENST00000465415 NUTM1Q86Y26 1132 aa16.16■□□□□ 0.18
CNKSR1-203ENST00000465415 TTLL6Q8N841 843 aa16.16■□□□□ 0.18
CNKSR1-203ENST00000465415 ZNF622Q969S3 477 aaKnown RBP eCLIP16.16■□□□□ 0.18
CNKSR1-203ENST00000465415 PHAXQ9H814 394 aaKnown RBP16.16■□□□□ 0.18
CNKSR1-203ENST00000465415 ARFGEF2Q9Y6D5 1785 aa16.15■□□□□ 0.18
CNKSR1-203ENST00000465415 TCERG1O14776 1098 aaKnown RBP16.15■□□□□ 0.18
CNKSR1-203ENST00000465415 SRGNP10124 158 aa16.15■□□□□ 0.18
CNKSR1-203ENST00000465415 RIC1Q4ADV7 1423 aa16.15■□□□□ 0.18
CNKSR1-203ENST00000465415 ERFEQ4G0M1 354 aa16.15■□□□□ 0.18
CNKSR1-203ENST00000465415 DDX58O95786 925 aaKnown RBP16.14■□□□□ 0.17
CNKSR1-203ENST00000465415 STYK1Q6J9G0 422 aa16.14■□□□□ 0.17
CNKSR1-203ENST00000465415 ARHGAP27Q6ZUM4 889 aa16.14■□□□□ 0.17
CNKSR1-203ENST00000465415 RIC3Q7Z5B4 369 aa16.14■□□□□ 0.17
CNKSR1-203ENST00000465415 NLRP10Q86W26 655 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms