RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 COL15A1P39059 1388 aa21.48■■□□□ 1.03
EXOSC3-203ENST00000465229 DDX58O95786 925 aaKnown RBP21.48■■□□□ 1.03
EXOSC3-203ENST00000465229 KSR2Q6VAB6 950 aa21.48■■□□□ 1.03
EXOSC3-203ENST00000465229 DZIP3Q86Y13 1208 aaKnown RBP21.48■■□□□ 1.03
EXOSC3-203ENST00000465229 ARXQ96QS3 562 aa21.48■■□□□ 1.03
EXOSC3-203ENST00000465229 API5Q9BZZ5 524 aaKnown RBP21.48■■□□□ 1.03
EXOSC3-203ENST00000465229 TFCP2L1Q9NZI6 479 aa21.48■■□□□ 1.03
EXOSC3-203ENST00000465229 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.47■■□□□ 1.03
EXOSC3-203ENST00000465229 F6X3S4 739 aa21.47■■□□□ 1.03
EXOSC3-203ENST00000465229 TRAPPC3LQ5T215 181 aa21.47■■□□□ 1.03
EXOSC3-203ENST00000465229 PLBD2Q8NHP8 589 aa21.47■■□□□ 1.03
EXOSC3-203ENST00000465229 ARHGEF1Q92888 912 aaKnown RBP21.47■■□□□ 1.03
EXOSC3-203ENST00000465229 A0A087WZG4 1122 aa21.47■■□□□ 1.03
EXOSC3-203ENST00000465229 PHF14O94880 888 aa21.47■■□□□ 1.03
EXOSC3-203ENST00000465229 CLUAP1Q96AJ1 413 aa21.47■■□□□ 1.03
EXOSC3-203ENST00000465229 ADCY9O60503 1353 aa21.46■■□□□ 1.03
EXOSC3-203ENST00000465229 ADRA2BP18089 450 aa21.46■■□□□ 1.03
EXOSC3-203ENST00000465229 SSFA2P28290 1259 aa21.46■■□□□ 1.03
EXOSC3-203ENST00000465229 SLC15A2Q16348 729 aa21.46■■□□□ 1.03
EXOSC3-203ENST00000465229 KIF6Q6ZMV9 814 aa21.46■■□□□ 1.03
EXOSC3-203ENST00000465229 RIC3Q7Z5B4 369 aa21.46■■□□□ 1.03
EXOSC3-203ENST00000465229 MAP3K2Q9Y2U5 619 aa21.46■■□□□ 1.03
EXOSC3-203ENST00000465229 C20orf194Q5TEA3 1177 aa21.45■■□□□ 1.02
EXOSC3-203ENST00000465229 ZBTB3Q9H5J0 574 aa21.45■■□□□ 1.02
EXOSC3-203ENST00000465229 STK32BQ9NY57 414 aa21.45■■□□□ 1.02
EXOSC3-203ENST00000465229 MAP3K15Q6ZN16 1313 aa21.45■■□□□ 1.02
EXOSC3-203ENST00000465229 CAMTA2O94983 1202 aa21.44■■□□□ 1.02
EXOSC3-203ENST00000465229 RLBP1P12271 317 aa21.44■■□□□ 1.02
EXOSC3-203ENST00000465229 DNAAF4Q8WXU2 420 aa21.44■■□□□ 1.02
EXOSC3-203ENST00000465229 ERVV-1B6SEH8 477 aa21.44■■□□□ 1.02
EXOSC3-203ENST00000465229 PDE3AQ14432 1141 aa21.44■■□□□ 1.02
EXOSC3-203ENST00000465229 DZIP1LQ8IYY4 767 aaKnown RBP21.44■■□□□ 1.02
EXOSC3-203ENST00000465229 PANK1Q8TE04 598 aa21.44■■□□□ 1.02
EXOSC3-203ENST00000465229 RFC4P35249 363 aa21.43■■□□□ 1.02
EXOSC3-203ENST00000465229 HLFQ16534 295 aa21.43■■□□□ 1.02
EXOSC3-203ENST00000465229 NARFQ9UHQ1 456 aa21.43■■□□□ 1.02
EXOSC3-203ENST00000465229 ABCC4O15439 1325 aa21.43■■□□□ 1.02
EXOSC3-203ENST00000465229 NUP188Q5SRE5 1749 aa21.42■■□□□ 1.02
EXOSC3-203ENST00000465229 UBR3Q6ZT12 1888 aa21.42■■□□□ 1.02
EXOSC3-203ENST00000465229 MS4A1P11836 297 aa21.42■■□□□ 1.02
EXOSC3-203ENST00000465229 SLC4A10Q6U841 1118 aa21.42■■□□□ 1.02
EXOSC3-203ENST00000465229 COL23A1Q86Y22 540 aaPredicted RBP21.42■■□□□ 1.02
EXOSC3-203ENST00000465229 FTSJ3Q8IY81 847 aaKnown RBP21.42■■□□□ 1.02
EXOSC3-203ENST00000465229 METTL22Q9BUU2 404 aaPredicted RBP21.42■■□□□ 1.02
EXOSC3-203ENST00000465229 SRP68Q9UHB9 627 aaKnown RBP21.42■■□□□ 1.02
EXOSC3-203ENST00000465229 GIGYF2Q6Y7W6 1299 aaKnown RBP21.41■■□□□ 1.02
EXOSC3-203ENST00000465229 FLAD1Q8NFF5 587 aa21.41■■□□□ 1.02
EXOSC3-203ENST00000465229 PNPLA7Q6ZV29 1317 aa21.41■■□□□ 1.02
EXOSC3-203ENST00000465229 ZPR1O75312 459 aa21.4■■□□□ 1.02
EXOSC3-203ENST00000465229 CRBNQ96SW2 442 aa21.4■■□□□ 1.02
EXOSC3-203ENST00000465229 USP42Q9H9J4 1324 aaKnown RBP21.4■■□□□ 1.02
EXOSC3-203ENST00000465229 BEND3Q5T5X7 828 aa21.4■■□□□ 1.02
EXOSC3-203ENST00000465229 USPL1Q5W0Q7 1092 aa21.4■■□□□ 1.02
EXOSC3-203ENST00000465229 TMEM57Q8N5G2 664 aa21.4■■□□□ 1.02
EXOSC3-203ENST00000465229 BCL2L12Q9HB09 334 aa21.4■■□□□ 1.02
EXOSC3-203ENST00000465229 TCIRG1Q13488 830 aa21.39■■□□□ 1.01
EXOSC3-203ENST00000465229 INTS3Q68E01 1043 aaKnown RBP21.39■■□□□ 1.01
EXOSC3-203ENST00000465229 MYD88Q99836 296 aa21.39■■□□□ 1.01
EXOSC3-203ENST00000465229 RGL2O15211 777 aa21.38■■□□□ 1.01
EXOSC3-203ENST00000465229 CLEC4GQ6UXB4 293 aa21.38■■□□□ 1.01
EXOSC3-203ENST00000465229 IGKV5-2P06315 115 aa21.37■■□□□ 1.01
EXOSC3-203ENST00000465229 NEXNQ0ZGT2 675 aa21.37■■□□□ 1.01
EXOSC3-203ENST00000465229 ATP5J2-PTCD1G3V325 749 aa21.37■■□□□ 1.01
EXOSC3-203ENST00000465229 CCT4P50991 539 aaKnown RBP21.37■■□□□ 1.01
EXOSC3-203ENST00000465229 LINS1Q8NG48 757 aa21.37■■□□□ 1.01
EXOSC3-203ENST00000465229 COG6Q9Y2V7 657 aa21.37■■□□□ 1.01
EXOSC3-203ENST00000465229 MSH5O43196 834 aa21.36■■□□□ 1.01
EXOSC3-203ENST00000465229 GYS1P13807 737 aa21.36■■□□□ 1.01
EXOSC3-203ENST00000465229 CWF19L2Q2TBE0 894 aaKnown RBP21.36■■□□□ 1.01
EXOSC3-203ENST00000465229 HSP90AB3PQ58FF7 597 aa21.36■■□□□ 1.01
EXOSC3-203ENST00000465229 ISCA1Q9BUE6 129 aa21.36■■□□□ 1.01
EXOSC3-203ENST00000465229 SRCIN1Q9C0H9 1055 aa21.36■■□□□ 1.01
EXOSC3-203ENST00000465229 ZNF652Q9Y2D9 606 aa21.36■■□□□ 1.01
EXOSC3-203ENST00000465229 ATP10DQ9P241 1426 aa21.36■■□□□ 1.01
EXOSC3-203ENST00000465229 TRIM28Q13263 835 aaKnown RBP21.35■■□□□ 1.01
EXOSC3-203ENST00000465229 ZNF34Q8IZ26 560 aa21.35■■□□□ 1.01
EXOSC3-203ENST00000465229 PXDNLA1KZ92 1463 aa21.34■■□□□ 1.01
EXOSC3-203ENST00000465229 NEURL1BA8MQ27 555 aa21.34■■□□□ 1.01
EXOSC3-203ENST00000465229 MVPQ14764 893 aaKnown RBP21.34■■□□□ 1.01
EXOSC3-203ENST00000465229 ITPRIPQ8IWB1 547 aa21.34■■□□□ 1.01
EXOSC3-203ENST00000465229 TUBGCP6Q96RT7 1819 aa21.33■■□□□ 1.01
EXOSC3-203ENST00000465229 ALDH1L1O75891 902 aa21.33■■□□□ 1.01
EXOSC3-203ENST00000465229 GPTP24298 496 aa21.33■■□□□ 1.01
EXOSC3-203ENST00000465229 PDGFDQ9GZP0 370 aaPredicted RBP21.33■■□□□ 1.01
EXOSC3-203ENST00000465229 ARFGEF2Q9Y6D5 1785 aa21.33■■□□□ 1.01
EXOSC3-203ENST00000465229 TBC1D9BQ66K14 1250 aa21.33■■□□□ 1
EXOSC3-203ENST00000465229 C4AP0C0L4 1744 aa21.32■■□□□ 1
EXOSC3-203ENST00000465229 CCDC191Q8NCU4 936 aa21.32■■□□□ 1
EXOSC3-203ENST00000465229 NIP7Q9Y221 180 aaKnown RBP eCLIP21.32■■□□□ 1
EXOSC3-203ENST00000465229 GCKRQ14397 625 aa21.31■■□□□ 1
EXOSC3-203ENST00000465229 R3HDM1Q15032 1099 aaKnown RBP21.31■■□□□ 1
EXOSC3-203ENST00000465229 NLRP10Q86W26 655 aa21.31■■□□□ 1
EXOSC3-203ENST00000465229 NUP98P52948 1817 aa21.31■■□□□ 1
EXOSC3-203ENST00000465229 UBN2Q6ZU65 1347 aa21.31■■□□□ 1
EXOSC3-203ENST00000465229 ZBTB7BO15156 539 aaPredicted RBP21.3■■□□□ 1
EXOSC3-203ENST00000465229 BICDL1Q6ZP65 573 aa21.3■■□□□ 1
EXOSC3-203ENST00000465229 USP44Q9H0E7 712 aa21.3■■□□□ 1
EXOSC3-203ENST00000465229 CWC25Q9NXE8 425 aaPredicted RBP21.3■■□□□ 1
EXOSC3-203ENST00000465229 NFIXQ14938 502 aa21.29■■□□□ 1
EXOSC3-203ENST00000465229 NLGN1Q8N2Q7 840 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms