RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 PARP3Q9Y6F1 533 aa6.66□□□□□ -1.34
SCN3A-206ENST00000465043 NEURL1BA8MQ27 555 aa6.65□□□□□ -1.34
SCN3A-206ENST00000465043 GNB5O14775 395 aa6.65□□□□□ -1.34
SCN3A-206ENST00000465043 CD33P20138 364 aa6.65□□□□□ -1.34
SCN3A-206ENST00000465043 TXLNAP40222 546 aa6.65□□□□□ -1.34
SCN3A-206ENST00000465043 NEUROD1Q13562 356 aa6.65□□□□□ -1.34
SCN3A-206ENST00000465043 POTEAQ6S8J7 498 aa6.65□□□□□ -1.34
SCN3A-206ENST00000465043 C1orf229Q6ZS94 237 aaPredicted RBP6.65□□□□□ -1.34
SCN3A-206ENST00000465043 STAG2Q8N3U4 1231 aa6.65□□□□□ -1.34
SCN3A-206ENST00000465043 RHPN1Q8TCX5 695 aa6.65□□□□□ -1.34
SCN3A-206ENST00000465043 BTBD6Q96KE9 485 aa6.65□□□□□ -1.34
SCN3A-206ENST00000465043 CALR3Q96L12 384 aaKnown RBP6.65□□□□□ -1.34
SCN3A-206ENST00000465043 NOP53Q9NZM5 478 aaKnown RBP6.65□□□□□ -1.34
SCN3A-206ENST00000465043 MAFBQ9Y5Q3 323 aaPredicted RBP6.65□□□□□ -1.34
SCN3A-206ENST00000465043 MSTNO14793 375 aa6.64□□□□□ -1.35
SCN3A-206ENST00000465043 RASA1P20936 1047 aa6.64□□□□□ -1.35
SCN3A-206ENST00000465043 SEC13P55735 322 aa6.64□□□□□ -1.35
SCN3A-206ENST00000465043 LARP1Q6PKG0 1096 aaKnown RBP6.64□□□□□ -1.35
SCN3A-206ENST00000465043 ZNF594Q96JF6 807 aaPredicted RBP6.64□□□□□ -1.35
SCN3A-206ENST00000465043 TFIP11Q9UBB9 837 aaKnown RBP6.64□□□□□ -1.35
SCN3A-206ENST00000465043 KIAA1024Q9UPX6 916 aa6.64□□□□□ -1.35
SCN3A-206ENST00000465043 SHROOM4Q9ULL8 1493 aa6.64□□□□□ -1.35
SCN3A-206ENST00000465043 ABCC9O60706 1549 aa6.64□□□□□ -1.35
SCN3A-206ENST00000465043 SNRPNP63162 240 aaKnown RBP6.63□□□□□ -1.35
SCN3A-206ENST00000465043 LRRC69Q6ZNQ3 347 aa6.63□□□□□ -1.35
SCN3A-206ENST00000465043 TSPAN10Q9H1Z9 355 aaPredicted RBP6.63□□□□□ -1.35
SCN3A-206ENST00000465043 PPP1R12BO60237 982 aaPredicted RBP6.62□□□□□ -1.35
SCN3A-206ENST00000465043 ALAS2P22557 587 aa6.62□□□□□ -1.35
SCN3A-206ENST00000465043 PLA2G4EQ3MJ16 856 aa6.62□□□□□ -1.35
SCN3A-206ENST00000465043 TBCELQ5QJ74 424 aa6.62□□□□□ -1.35
SCN3A-206ENST00000465043 PPP1R12CQ9BZL4 782 aa6.62□□□□□ -1.35
SCN3A-206ENST00000465043 SIN3BO75182 1162 aa6.61□□□□□ -1.35
SCN3A-206ENST00000465043 DGKGP49619 791 aa6.61□□□□□ -1.35
SCN3A-206ENST00000465043 LINC00114Q6XXX2 140 aa6.61□□□□□ -1.35
SCN3A-206ENST00000465043 CHSY3Q70JA7 882 aa6.61□□□□□ -1.35
SCN3A-206ENST00000465043 TSEN2Q8NCE0 465 aaKnown RBP6.61□□□□□ -1.35
SCN3A-206ENST00000465043 C7orf43Q8WVR3 580 aa6.61□□□□□ -1.35
SCN3A-206ENST00000465043 PHACTR1Q9C0D0 580 aa6.61□□□□□ -1.35
SCN3A-206ENST00000465043 ELOA3CA0A087WX78 387 aaPredicted RBP6.6□□□□□ -1.35
SCN3A-206ENST00000465043 ELOA3DA6NLF2 546 aaPredicted RBP6.6□□□□□ -1.35
SCN3A-206ENST00000465043 FAM196BA6NMK8 535 aa6.6□□□□□ -1.35
SCN3A-206ENST00000465043 SFI1A8K8P3 1242 aa6.6□□□□□ -1.35
SCN3A-206ENST00000465043 DKK1O94907 266 aa6.6□□□□□ -1.35
SCN3A-206ENST00000465043 KCNQ4P56696 695 aa6.6□□□□□ -1.35
SCN3A-206ENST00000465043 ELOA3BQ3SY89 546 aa6.6□□□□□ -1.35
SCN3A-206ENST00000465043 FCHSD1Q86WN1 690 aa6.6□□□□□ -1.35
SCN3A-206ENST00000465043 ELOA3Q8NG57 546 aa6.6□□□□□ -1.35
SCN3A-206ENST00000465043 VRTNQ9H8Y1 702 aa6.6□□□□□ -1.35
SCN3A-206ENST00000465043 EFCC1Q9HA90 598 aa6.6□□□□□ -1.35
SCN3A-206ENST00000465043 ATAD2Q6PL18 1390 aa6.59□□□□□ -1.35
SCN3A-206ENST00000465043 SPDYE3A6NKU9 549 aa6.59□□□□□ -1.35
SCN3A-206ENST00000465043 HOXB4P17483 251 aaPredicted RBP6.59□□□□□ -1.35
SCN3A-206ENST00000465043 PCBP4P57723 403 aaKnown RBP6.59□□□□□ -1.35
SCN3A-206ENST00000465043 SYT9Q86SS6 491 aa6.59□□□□□ -1.35
SCN3A-206ENST00000465043 CEP63Q96MT8 703 aa6.59□□□□□ -1.35
SCN3A-206ENST00000465043 SPOCK3Q9BQ16 436 aa6.59□□□□□ -1.35
SCN3A-206ENST00000465043 C2orf49Q9BVC5 232 aaPredicted RBP6.59□□□□□ -1.35
SCN3A-206ENST00000465043 STRN4Q9NRL3 753 aa6.59□□□□□ -1.35
SCN3A-206ENST00000465043 ADARB2-AS1A8MUL3 147 aa6.58□□□□□ -1.36
SCN3A-206ENST00000465043 PTK7Q13308 1070 aa6.58□□□□□ -1.36
SCN3A-206ENST00000465043 SCG3Q8WXD2 468 aaKnown RBP6.58□□□□□ -1.36
SCN3A-206ENST00000465043 HINFPQ9BQA5 517 aa6.58□□□□□ -1.36
SCN3A-206ENST00000465043 BRD7Q9NPI1 651 aa6.58□□□□□ -1.36
SCN3A-206ENST00000465043 KLF15Q9UIH9 416 aa6.58□□□□□ -1.36
SCN3A-206ENST00000465043 HCN2Q9UL51 889 aa6.58□□□□□ -1.36
SCN3A-206ENST00000465043 HCN4Q9Y3Q4 1203 aa6.58□□□□□ -1.36
SCN3A-206ENST00000465043 C21orf2O43822 256 aa6.57□□□□□ -1.36
SCN3A-206ENST00000465043 IGFBP4P22692 258 aa6.57□□□□□ -1.36
SCN3A-206ENST00000465043 SPEM2Q0P670 501 aa6.57□□□□□ -1.36
SCN3A-206ENST00000465043 GRIN2CQ14957 1233 aa6.57□□□□□ -1.36
SCN3A-206ENST00000465043 RTN1Q16799 776 aa6.57□□□□□ -1.36
SCN3A-206ENST00000465043 KANK4Q5T7N3 995 aaPredicted RBP6.57□□□□□ -1.36
SCN3A-206ENST00000465043 SH3PXD2AQ5TCZ1 1133 aa6.57□□□□□ -1.36
SCN3A-206ENST00000465043 IER5Q5VY09 327 aa6.57□□□□□ -1.36
SCN3A-206ENST00000465043 ANKMY2Q8IV38 441 aa6.57□□□□□ -1.36
SCN3A-206ENST00000465043 ALDH16A1Q8IZ83 802 aa6.57□□□□□ -1.36
SCN3A-206ENST00000465043 TNFRSF25Q93038 417 aa6.57□□□□□ -1.36
SCN3A-206ENST00000465043 SUSD3Q96L08 255 aa6.57□□□□□ -1.36
SCN3A-206ENST00000465043 KCNH4Q9UQ05 1017 aa6.57□□□□□ -1.36
SCN3A-206ENST00000465043 KRBA1A5PL33 1030 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 USP17L15C9J2P7 530 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 USP17L10C9JJH3 530 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 USP17L13C9JLJ4 530 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 USP17L12C9JPN9 530 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 USP17L11C9JVI0 530 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 USP17L21D6R901 530 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 USP17L18D6R9N7 530 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 USP17L22D6RA61 530 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 USP17L17D6RBQ6 530 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 USP17L19D6RCP7 530 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 USP17L20D6RJB6 530 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 COL8A1P27658 744 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 LMOD1P29536 600 aaPredicted RBP6.56□□□□□ -1.36
SCN3A-206ENST00000465043 TYRO3Q06418 890 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 USP17L24Q0WX57 530 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 DPYDQ12882 1025 aa6.56□□□□□ -1.36
SCN3A-206ENST00000465043 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.56□□□□□ -1.36
SCN3A-206ENST00000465043 PROCP04070 461 aa6.55□□□□□ -1.36
SCN3A-206ENST00000465043 SFSWAPQ12872 951 aaKnown RBP6.55□□□□□ -1.36
SCN3A-206ENST00000465043 CRTC2Q53ET0 693 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms