RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 ANKRD36CQ5JPF3 1778 aa15.52■□□□□ 0.08
RPUSD3-211ENST00000464783 N4BP2Q86UW6 1770 aaPredicted RBP15.52■□□□□ 0.08
RPUSD3-211ENST00000464783 NRXN2Q9P2S2 1712 aa15.52■□□□□ 0.08
RPUSD3-211ENST00000464783 MAP3K15Q6ZN16 1313 aa15.52■□□□□ 0.08
RPUSD3-211ENST00000464783 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
RPUSD3-211ENST00000464783 POLRMTO00411 1230 aaKnown RBP15.52■□□□□ 0.08
RPUSD3-211ENST00000464783 NPHP1O15259 732 aa15.52■□□□□ 0.08
RPUSD3-211ENST00000464783 TM4SF1P30408 202 aa15.52■□□□□ 0.08
RPUSD3-211ENST00000464783 AIMP1Q12904 312 aaKnown RBP15.52■□□□□ 0.08
RPUSD3-211ENST00000464783 TWISTNBQ3B726 338 aaPredicted RBP15.52■□□□□ 0.08
RPUSD3-211ENST00000464783 CLEC4GQ6UXB4 293 aa15.52■□□□□ 0.08
RPUSD3-211ENST00000464783 TTLL7Q6ZT98 887 aa15.52■□□□□ 0.08
RPUSD3-211ENST00000464783 TSPYL6Q8N831 410 aa15.52■□□□□ 0.08
RPUSD3-211ENST00000464783 SETDB2Q96T68 719 aa15.52■□□□□ 0.08
RPUSD3-211ENST00000464783 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.08
RPUSD3-211ENST00000464783 CARMIL3Q8ND23 1372 aa15.51■□□□□ 0.07
RPUSD3-211ENST00000464783 ZNF521Q96K83 1311 aa15.51■□□□□ 0.07
RPUSD3-211ENST00000464783 CCDC30Q5VVM6 783 aa15.51■□□□□ 0.07
RPUSD3-211ENST00000464783 XAGE3Q8WTP9 111 aa15.51■□□□□ 0.07
RPUSD3-211ENST00000464783 HYPKQ9NX55 129 aa15.51■□□□□ 0.07
RPUSD3-211ENST00000464783 CACNA1FO60840 1977 aa15.51■□□□□ 0.07
RPUSD3-211ENST00000464783 C10orf71Q711Q0 1435 aa15.51■□□□□ 0.07
RPUSD3-211ENST00000464783 ERVV-1B6SEH8 477 aa15.5■□□□□ 0.07
RPUSD3-211ENST00000464783 SERPINB2P05120 415 aa15.5■□□□□ 0.07
RPUSD3-211ENST00000464783 EXOSC9Q06265 439 aaKnown RBP15.5■□□□□ 0.07
RPUSD3-211ENST00000464783 HLFQ16534 295 aa15.5■□□□□ 0.07
RPUSD3-211ENST00000464783 COPS6Q7L5N1 327 aa15.5■□□□□ 0.07
RPUSD3-211ENST00000464783 NLGN2Q8NFZ4 835 aa15.5■□□□□ 0.07
RPUSD3-211ENST00000464783 STK31Q9BXU1 1019 aa15.5■□□□□ 0.07
RPUSD3-211ENST00000464783 NIP7Q9Y221 180 aaKnown RBP eCLIP15.5■□□□□ 0.07
RPUSD3-211ENST00000464783 ARFGEF2Q9Y6D5 1785 aa15.49■□□□□ 0.07
RPUSD3-211ENST00000464783 E9PSI1 815 aa15.49■□□□□ 0.07
RPUSD3-211ENST00000464783 RGL2O15211 777 aa15.49■□□□□ 0.07
RPUSD3-211ENST00000464783 HNRNPUQ00839 825 aaKnown RBP eCLIP15.49■□□□□ 0.07
RPUSD3-211ENST00000464783 LRP10Q7Z4F1 713 aa15.49■□□□□ 0.07
RPUSD3-211ENST00000464783 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
RPUSD3-211ENST00000464783 KIAA1551Q9HCM1 1747 aa15.48■□□□□ 0.07
RPUSD3-211ENST00000464783 FAM177BA6PVY3 158 aa15.47■□□□□ 0.07
RPUSD3-211ENST00000464783 TCERG1O14776 1098 aaKnown RBP15.47■□□□□ 0.07
RPUSD3-211ENST00000464783 GIGYF2Q6Y7W6 1299 aaKnown RBP15.47■□□□□ 0.07
RPUSD3-211ENST00000464783 NBPF5PQ86XG9 351 aaPredicted RBP15.47■□□□□ 0.07
RPUSD3-211ENST00000464783 ANKRD31Q8N7Z5 1873 aa15.47■□□□□ 0.07
RPUSD3-211ENST00000464783 CNBD1Q8NA66 436 aa15.47■□□□□ 0.07
RPUSD3-211ENST00000464783 ATP10DQ9P241 1426 aa15.46■□□□□ 0.07
RPUSD3-211ENST00000464783 GPTP24298 496 aa15.46■□□□□ 0.07
RPUSD3-211ENST00000464783 GTF2E1P29083 439 aaPredicted RBP15.46■□□□□ 0.07
RPUSD3-211ENST00000464783 ST5P78524 1137 aa15.46■□□□□ 0.07
RPUSD3-211ENST00000464783 VAMP4O75379 141 aa15.45■□□□□ 0.06
RPUSD3-211ENST00000464783 TGFB2P61812 414 aa15.45■□□□□ 0.06
RPUSD3-211ENST00000464783 SLFN5Q08AF3 891 aa15.45■□□□□ 0.06
RPUSD3-211ENST00000464783 GPR162Q16538 588 aa15.45■□□□□ 0.06
RPUSD3-211ENST00000464783 HSP90AB3PQ58FF7 597 aa15.45■□□□□ 0.06
RPUSD3-211ENST00000464783 ANKRD13DQ6ZTN6 518 aa15.45■□□□□ 0.06
RPUSD3-211ENST00000464783 CDCA7LQ96GN5 454 aa15.45■□□□□ 0.06
RPUSD3-211ENST00000464783 PHAXQ9H814 394 aaKnown RBP15.45■□□□□ 0.06
RPUSD3-211ENST00000464783 BRCA1P38398 1863 aaKnown RBP15.45■□□□□ 0.06
RPUSD3-211ENST00000464783 PXDNLA1KZ92 1463 aa15.45■□□□□ 0.06
RPUSD3-211ENST00000464783 DLEC1Q9Y238 1755 aa15.44■□□□□ 0.06
RPUSD3-211ENST00000464783 A0A0G2JLW4 131 aa15.44■□□□□ 0.06
RPUSD3-211ENST00000464783 DDX58O95786 925 aaKnown RBP15.44■□□□□ 0.06
RPUSD3-211ENST00000464783 PRR5LQ6MZQ0 368 aa15.44■□□□□ 0.06
RPUSD3-211ENST00000464783 TPTE2Q6XPS3 522 aa15.44■□□□□ 0.06
RPUSD3-211ENST00000464783 RIC3Q7Z5B4 369 aa15.44■□□□□ 0.06
RPUSD3-211ENST00000464783 CCDC24Q8N4L8 307 aa15.44■□□□□ 0.06
RPUSD3-211ENST00000464783 PLBD2Q8NHP8 589 aa15.44■□□□□ 0.06
RPUSD3-211ENST00000464783 WWC3Q9ULE0 1092 aa15.44■□□□□ 0.06
RPUSD3-211ENST00000464783 CACNA1SQ13698 1873 aa15.44■□□□□ 0.06
RPUSD3-211ENST00000464783 SLC4A2P04920 1241 aa15.43■□□□□ 0.06
RPUSD3-211ENST00000464783 DPEP1P16444 411 aa15.43■□□□□ 0.06
RPUSD3-211ENST00000464783 NYXQ9GZU5 481 aa15.43■□□□□ 0.06
RPUSD3-211ENST00000464783 UBN2Q6ZU65 1347 aa15.43■□□□□ 0.06
RPUSD3-211ENST00000464783 PARP10Q53GL7 1025 aa15.42■□□□□ 0.06
RPUSD3-211ENST00000464783 PPP1R42Q7Z4L9 355 aa15.42■□□□□ 0.06
RPUSD3-211ENST00000464783 ZNF34Q8IZ26 560 aa15.42■□□□□ 0.06
RPUSD3-211ENST00000464783 COL11A2P13942 1736 aaPredicted RBP15.42■□□□□ 0.06
RPUSD3-211ENST00000464783 CHRNA5P30532 468 aa15.41■□□□□ 0.06
RPUSD3-211ENST00000464783 PDE6BP35913 854 aa15.41■□□□□ 0.06
RPUSD3-211ENST00000464783 TCIRG1Q13488 830 aa15.41■□□□□ 0.06
RPUSD3-211ENST00000464783 C2CD5Q86YS7 1000 aa15.41■□□□□ 0.06
RPUSD3-211ENST00000464783 BRIP1Q9BX63 1249 aa15.41■□□□□ 0.06
RPUSD3-211ENST00000464783 H0YIN7 160 aa15.4■□□□□ 0.06
RPUSD3-211ENST00000464783 SUSD4Q5VX71 490 aa15.4■□□□□ 0.06
RPUSD3-211ENST00000464783 NUTM1Q86Y26 1132 aa15.4■□□□□ 0.06
RPUSD3-211ENST00000464783 ARFGEF1Q9Y6D6 1849 aa15.4■□□□□ 0.06
RPUSD3-211ENST00000464783 IBTKQ9P2D0 1353 aaPredicted RBP15.39■□□□□ 0.05
RPUSD3-211ENST00000464783 TNRC6CQ9HCJ0 1690 aaKnown RBP15.39■□□□□ 0.05
RPUSD3-211ENST00000464783 FLIIQ13045 1269 aa15.39■□□□□ 0.05
RPUSD3-211ENST00000464783 FKBP5Q13451 457 aaPredicted RBP15.39■□□□□ 0.05
RPUSD3-211ENST00000464783 G2E3Q7L622 706 aa15.39■□□□□ 0.05
RPUSD3-211ENST00000464783 UTP14AQ9BVJ6 771 aaKnown RBP15.39■□□□□ 0.05
RPUSD3-211ENST00000464783 PIM2Q9P1W9 311 aa15.39■□□□□ 0.05
RPUSD3-211ENST00000464783 BCS1LQ9Y276 419 aa15.39■□□□□ 0.05
RPUSD3-211ENST00000464783 CHD4Q14839 1912 aa15.39■□□□□ 0.05
RPUSD3-211ENST00000464783 ATP5J2-PTCD1G3V325 749 aa15.38■□□□□ 0.05
RPUSD3-211ENST00000464783 YBX3P16989 372 aaKnown RBP eCLIP15.38■□□□□ 0.057e-7■■□□□ 12.7
RPUSD3-211ENST00000464783 ERFEQ4G0M1 354 aa15.38■□□□□ 0.05
RPUSD3-211ENST00000464783 KSR2Q6VAB6 950 aa15.38■□□□□ 0.05
RPUSD3-211ENST00000464783 NLRP10Q86W26 655 aa15.38■□□□□ 0.05
RPUSD3-211ENST00000464783 TRMT2AQ8IZ69 625 aaKnown RBP15.38■□□□□ 0.05
RPUSD3-211ENST00000464783 ZNF428Q96B54 188 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms