RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 MYL6BP14649 208 aa28.93■■■□□ 2.22
UBA3-206ENST00000464605 TTLL7Q6ZT98 887 aa28.93■■■□□ 2.22
UBA3-206ENST00000464605 NGEFQ8N5V2 710 aa28.93■■■□□ 2.22
UBA3-206ENST00000464605 SETDB2Q96T68 719 aa28.93■■■□□ 2.22
UBA3-206ENST00000464605 MBIPQ9NS73 344 aa28.93■■■□□ 2.22
UBA3-206ENST00000464605 EIF2S2P20042 333 aaKnown RBP28.92■■■□□ 2.22
UBA3-206ENST00000464605 PRR5LQ6MZQ0 368 aa28.92■■■□□ 2.22
UBA3-206ENST00000464605 PROSER3Q2NL68 480 aa28.91■■■□□ 2.22
UBA3-206ENST00000464605 SENP3-EIF4A1A0A087X0R7 540 aa28.9■■■□□ 2.22
UBA3-206ENST00000464605 IFT57Q9NWB7 429 aa28.9■■■□□ 2.22
UBA3-206ENST00000464605 BCS1LQ9Y276 419 aa28.9■■■□□ 2.22
UBA3-206ENST00000464605 ZNF652Q9Y2D9 606 aa28.9■■■□□ 2.22
UBA3-206ENST00000464605 PIM2Q9P1W9 311 aa28.89■■■□□ 2.22
UBA3-206ENST00000464605 MAP3K15Q6ZN16 1313 aa28.89■■■□□ 2.21
UBA3-206ENST00000464605 ERVV-1B6SEH8 477 aa28.88■■■□□ 2.21
UBA3-206ENST00000464605 ANXA1P04083 346 aa28.88■■■□□ 2.21
UBA3-206ENST00000464605 CCDC27Q2M243 656 aa28.88■■■□□ 2.21
UBA3-206ENST00000464605 CCDC24Q8N4L8 307 aa28.88■■■□□ 2.21
UBA3-206ENST00000464605 COL11A2P13942 1736 aaPredicted RBP28.88■■■□□ 2.21
UBA3-206ENST00000464605 GNAI1P63096 354 aa28.87■■■□□ 2.21
UBA3-206ENST00000464605 NECTIN2Q92692 538 aa28.87■■■□□ 2.21
UBA3-206ENST00000464605 GPBP1L1Q9HC44 474 aaPredicted RBP28.87■■■□□ 2.21
UBA3-206ENST00000464605 HOXB7P09629 217 aa28.86■■■□□ 2.21
UBA3-206ENST00000464605 CALD1Q05682 793 aaKnown RBP28.86■■■□□ 2.21
UBA3-206ENST00000464605 BRIP1Q9BX63 1249 aa28.86■■■□□ 2.21
UBA3-206ENST00000464605 NIP7Q9Y221 180 aaKnown RBP eCLIP28.86■■■□□ 2.21
UBA3-206ENST00000464605 NCBP3Q53F19 620 aaKnown RBP28.85■■■□□ 2.21
UBA3-206ENST00000464605 WWC1Q8IX03 1113 aa28.85■■■□□ 2.21
UBA3-206ENST00000464605 DUSP27Q5VZP5 1158 aa28.84■■■□□ 2.21
UBA3-206ENST00000464605 CNBD1Q8NA66 436 aa28.84■■■□□ 2.21
UBA3-206ENST00000464605 DALRD3Q5D0E6 543 aaKnown RBP28.83■■■□□ 2.21
UBA3-206ENST00000464605 KIF6Q6ZMV9 814 aa28.83■■■□□ 2.21
UBA3-206ENST00000464605 C2CD5Q86YS7 1000 aa28.83■■■□□ 2.21
UBA3-206ENST00000464605 ZBTB3Q9H5J0 574 aa28.83■■■□□ 2.21
UBA3-206ENST00000464605 DDX21Q9NR30 783 aaKnown RBP eCLIP28.83■■■□□ 2.21
UBA3-206ENST00000464605 ZNF526Q8TF50 670 aaPredicted RBP28.82■■■□□ 2.2
UBA3-206ENST00000464605 SBF1O95248 1867 aa28.81■■■□□ 2.2
UBA3-206ENST00000464605 ARHGAP27Q6ZUM4 889 aa28.81■■■□□ 2.2
UBA3-206ENST00000464605 NBPF5PQ86XG9 351 aaPredicted RBP28.81■■■□□ 2.2
UBA3-206ENST00000464605 ANKRD36CQ5JPF3 1778 aa28.8■■■□□ 2.2
UBA3-206ENST00000464605 H0YIN7 160 aa28.8■■■□□ 2.2
UBA3-206ENST00000464605 HDGFL1Q5TGJ6 251 aa28.8■■■□□ 2.2
UBA3-206ENST00000464605 GIGYF2Q6Y7W6 1299 aaKnown RBP28.8■■■□□ 2.2
UBA3-206ENST00000464605 CHPF2Q9P2E5 772 aa28.8■■■□□ 2.2
UBA3-206ENST00000464605 CACNA1SQ13698 1873 aa28.8■■■□□ 2.2
UBA3-206ENST00000464605 PDE6BP35913 854 aa28.79■■■□□ 2.2
UBA3-206ENST00000464605 COPS6Q7L5N1 327 aa28.79■■■□□ 2.2
UBA3-206ENST00000464605 ZNF34Q8IZ26 560 aa28.79■■■□□ 2.2
UBA3-206ENST00000464605 FAM9BQ8IZU0 186 aa28.79■■■□□ 2.2
UBA3-206ENST00000464605 C8orf58Q8NAV2 365 aa28.79■■■□□ 2.2
UBA3-206ENST00000464605 UBN2Q6ZU65 1347 aa28.78■■■□□ 2.2
UBA3-206ENST00000464605 ST5P78524 1137 aa28.78■■■□□ 2.2
UBA3-206ENST00000464605 TPTE2Q6XPS3 522 aa28.78■■■□□ 2.2
UBA3-206ENST00000464605 XAGE3Q8WTP9 111 aa28.78■■■□□ 2.2
UBA3-206ENST00000464605 PDZRN3Q9UPQ7 1066 aa28.78■■■□□ 2.2
UBA3-206ENST00000464605 SLX4Q8IY92 1834 aa28.77■■■□□ 2.2
UBA3-206ENST00000464605 ARFGEF2Q9Y6D5 1785 aa28.76■■■□□ 2.19
UBA3-206ENST00000464605 KLRG2A4D1S0 409 aaPredicted RBP28.76■■■□□ 2.19
UBA3-206ENST00000464605 FAM177BA6PVY3 158 aa28.76■■■□□ 2.19
UBA3-206ENST00000464605 ELL2O00472 640 aaPredicted RBP28.76■■■□□ 2.19
UBA3-206ENST00000464605 TTLL6Q8N841 843 aa28.76■■■□□ 2.19
UBA3-206ENST00000464605 NPHP1O15259 732 aa28.75■■■□□ 2.19
UBA3-206ENST00000464605 GPTP24298 496 aa28.75■■■□□ 2.19
UBA3-206ENST00000464605 TSR2Q969E8 191 aaKnown RBP28.75■■■□□ 2.19
UBA3-206ENST00000464605 DBF4Q9UBU7 674 aaPredicted RBP28.75■■■□□ 2.19
UBA3-206ENST00000464605 CCDC88AQ3V6T2 1871 aa28.74■■■□□ 2.19
UBA3-206ENST00000464605 IL16Q14005 1332 aa28.74■■■□□ 2.19
UBA3-206ENST00000464605 TNRC6CQ9HCJ0 1690 aaKnown RBP28.74■■■□□ 2.19
UBA3-206ENST00000464605 SRGNP10124 158 aa28.74■■■□□ 2.19
UBA3-206ENST00000464605 AIMP1Q12904 312 aaKnown RBP28.74■■■□□ 2.19
UBA3-206ENST00000464605 TSPYL6Q8N831 410 aa28.74■■■□□ 2.19
UBA3-206ENST00000464605 SUSD4Q5VX71 490 aa28.73■■■□□ 2.19
UBA3-206ENST00000464605 SALL2Q9Y467 1007 aaPredicted RBP28.73■■■□□ 2.19
UBA3-206ENST00000464605 KIF3CO14782 793 aa28.72■■■□□ 2.19
UBA3-206ENST00000464605 IBTKQ9P2D0 1353 aaPredicted RBP28.72■■■□□ 2.19
UBA3-206ENST00000464605 NUTM1Q86Y26 1132 aa28.71■■■□□ 2.19
UBA3-206ENST00000464605 ZNF622Q969S3 477 aaKnown RBP eCLIP28.71■■■□□ 2.19
UBA3-206ENST00000464605 ABCC12Q96J65 1359 aa28.71■■■□□ 2.19
UBA3-206ENST00000464605 FER1L6Q2WGJ9 1857 aa28.7■■■□□ 2.19
UBA3-206ENST00000464605 STYK1Q6J9G0 422 aa28.7■■■□□ 2.18
UBA3-206ENST00000464605 WDR63Q8IWG1 891 aa28.7■■■□□ 2.18
UBA3-206ENST00000464605 NYXQ9GZU5 481 aa28.7■■■□□ 2.18
UBA3-206ENST00000464605 NTSR2O95665 410 aa28.69■■■□□ 2.18
UBA3-206ENST00000464605 ERFEQ4G0M1 354 aa28.69■■■□□ 2.18
UBA3-206ENST00000464605 C9orf131Q5VYM1 1079 aa28.69■■■□□ 2.18
UBA3-206ENST00000464605 MASTLQ96GX5 879 aa28.69■■■□□ 2.18
UBA3-206ENST00000464605 HYPKQ9NX55 129 aa28.69■■■□□ 2.18
UBA3-206ENST00000464605 TCIRG1Q13488 830 aa28.67■■■□□ 2.18
UBA3-206ENST00000464605 PARP10Q53GL7 1025 aa28.67■■■□□ 2.18
UBA3-206ENST00000464605 PLBD2Q8NHP8 589 aa28.67■■■□□ 2.18
UBA3-206ENST00000464605 RIC1Q4ADV7 1423 aa28.67■■■□□ 2.18
UBA3-206ENST00000464605 GTF2E1P29083 439 aaPredicted RBP28.66■■■□□ 2.18
UBA3-206ENST00000464605 ANKRD13DQ6ZTN6 518 aa28.66■■■□□ 2.18
UBA3-206ENST00000464605 PHAXQ9H814 394 aaKnown RBP28.66■■■□□ 2.18
UBA3-206ENST00000464605 SPINK5Q9NQ38 1064 aaPredicted RBP28.66■■■□□ 2.18
UBA3-206ENST00000464605 CACNA1FO60840 1977 aa28.66■■■□□ 2.18
UBA3-206ENST00000464605 HSP90AB3PQ58FF7 597 aa28.65■■■□□ 2.18
UBA3-206ENST00000464605 CNKSR1Q969H4 720 aa28.65■■■□□ 2.18
UBA3-206ENST00000464605 NPR1P16066 1061 aa28.64■■■□□ 2.18
UBA3-206ENST00000464605 PRELPP51888 382 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms