RNA–Protein interactions for RNA: ENST00000463217.2

RPL3P9-201, Transcript of ribosomal protein L3 pseudogene 9, humanhuman

BASIC

Gene RPL3P9, Length 1,183 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P9-201ENST00000463217 TTLL6Q8N841 843 aa16.65■□□□□ 0.26
RPL3P9-201ENST00000463217 TRIM35Q9UPQ4 493 aa16.65■□□□□ 0.26
RPL3P9-201ENST00000463217 RRP7AQ9Y3A4 280 aaKnown RBP16.65■□□□□ 0.26
RPL3P9-201ENST00000463217 NPHP1O15259 732 aa16.64■□□□□ 0.25
RPL3P9-201ENST00000463217 CALD1Q05682 793 aaKnown RBP16.64■□□□□ 0.25
RPL3P9-201ENST00000463217 KIF6Q6ZMV9 814 aa16.64■□□□□ 0.25
RPL3P9-201ENST00000463217 NBPF5PQ86XG9 351 aaPredicted RBP16.64■□□□□ 0.25
RPL3P9-201ENST00000463217 MAP3K15Q6ZN16 1313 aa16.64■□□□□ 0.25
RPL3P9-201ENST00000463217 TPTE2Q6XPS3 522 aa16.63■□□□□ 0.25
RPL3P9-201ENST00000463217 HOXB7P09629 217 aa16.62■□□□□ 0.25
RPL3P9-201ENST00000463217 GPBP1L1Q9HC44 474 aaPredicted RBP16.62■□□□□ 0.25
RPL3P9-201ENST00000463217 NIP7Q9Y221 180 aaKnown RBP eCLIP16.62■□□□□ 0.25
RPL3P9-201ENST00000463217 NUP98P52948 1817 aa16.61■□□□□ 0.25
RPL3P9-201ENST00000463217 STYK1Q6J9G0 422 aa16.61■□□□□ 0.25
RPL3P9-201ENST00000463217 CNKSR1Q969H4 720 aa16.61■□□□□ 0.25
RPL3P9-201ENST00000463217 CFAP44Q96MT7 982 aa16.61■□□□□ 0.25
RPL3P9-201ENST00000463217 NYXQ9GZU5 481 aa16.61■□□□□ 0.25
RPL3P9-201ENST00000463217 COL11A2P13942 1736 aaPredicted RBP16.61■□□□□ 0.25
RPL3P9-201ENST00000463217 IBTKQ9P2D0 1353 aaPredicted RBP16.61■□□□□ 0.25
RPL3P9-201ENST00000463217 ARFGEF2Q9Y6D5 1785 aa16.6■□□□□ 0.25
RPL3P9-201ENST00000463217 ANP32CO43423 234 aa16.6■□□□□ 0.25
RPL3P9-201ENST00000463217 MYL6BP14649 208 aa16.6■□□□□ 0.25
RPL3P9-201ENST00000463217 ZC3H4Q9UPT8 1303 aaKnown RBP16.6■□□□□ 0.25
RPL3P9-201ENST00000463217 KLRG2A4D1S0 409 aaPredicted RBP16.59■□□□□ 0.25
RPL3P9-201ENST00000463217 APAF1O14727 1248 aa16.59■□□□□ 0.25
RPL3P9-201ENST00000463217 SRGNP10124 158 aa16.59■□□□□ 0.25
RPL3P9-201ENST00000463217 C1QTNF8P60827 252 aa16.59■□□□□ 0.25
RPL3P9-201ENST00000463217 HLFQ16534 295 aa16.59■□□□□ 0.25
RPL3P9-201ENST00000463217 ZNF622Q969S3 477 aaKnown RBP eCLIP16.59■□□□□ 0.25
RPL3P9-201ENST00000463217 MASTLQ96GX5 879 aa16.59■□□□□ 0.25
RPL3P9-201ENST00000463217 SBF1O95248 1867 aa16.59■□□□□ 0.25
RPL3P9-201ENST00000463217 EIF2S2P20042 333 aaKnown RBP16.58■□□□□ 0.24
RPL3P9-201ENST00000463217 PDIA6Q15084 440 aa16.58■□□□□ 0.24
RPL3P9-201ENST00000463217 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.24
RPL3P9-201ENST00000463217 SOGA3Q5TF21 947 aa16.58■□□□□ 0.24
RPL3P9-201ENST00000463217 C9orf131Q5VYM1 1079 aa16.58■□□□□ 0.24
RPL3P9-201ENST00000463217 GIGYF2Q6Y7W6 1299 aaKnown RBP16.58■□□□□ 0.24
RPL3P9-201ENST00000463217 TTLL7Q6ZT98 887 aa16.58■□□□□ 0.24
RPL3P9-201ENST00000463217 LRP10Q7Z4F1 713 aa16.58■□□□□ 0.24
RPL3P9-201ENST00000463217 NGEFQ8N5V2 710 aa16.58■□□□□ 0.24
RPL3P9-201ENST00000463217 IFT57Q9NWB7 429 aa16.58■□□□□ 0.24
RPL3P9-201ENST00000463217 LAS1LQ9Y4W2 734 aaKnown RBP16.58■□□□□ 0.24
RPL3P9-201ENST00000463217 RIC1Q4ADV7 1423 aa16.58■□□□□ 0.24
RPL3P9-201ENST00000463217 ZNF853P0CG23 659 aa16.57■□□□□ 0.24
RPL3P9-201ENST00000463217 GNAI1P63096 354 aa16.57■□□□□ 0.24
RPL3P9-201ENST00000463217 CHMP4AQ9BY43 222 aa16.57■□□□□ 0.24
RPL3P9-201ENST00000463217 DDX21Q9NR30 783 aaKnown RBP eCLIP16.57■□□□□ 0.24
RPL3P9-201ENST00000463217 NPR1P16066 1061 aa16.56■□□□□ 0.24
RPL3P9-201ENST00000463217 LMNB1P20700 586 aa16.56■□□□□ 0.24
RPL3P9-201ENST00000463217 GTF2E1P29083 439 aaPredicted RBP16.56■□□□□ 0.24
RPL3P9-201ENST00000463217 PARP10Q53GL7 1025 aa16.56■□□□□ 0.24
RPL3P9-201ENST00000463217 HSP90AB3PQ58FF7 597 aa16.56■□□□□ 0.24
RPL3P9-201ENST00000463217 ZNF34Q8IZ26 560 aa16.56■□□□□ 0.24
RPL3P9-201ENST00000463217 RNF123Q5XPI4 1314 aa16.55■□□□□ 0.24
RPL3P9-201ENST00000463217 CCDC27Q2M243 656 aa16.55■□□□□ 0.24
RPL3P9-201ENST00000463217 CCDC24Q8N4L8 307 aa16.55■□□□□ 0.24
RPL3P9-201ENST00000463217 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
RPL3P9-201ENST00000463217 RNF181Q9P0P0 153 aa16.55■□□□□ 0.24
RPL3P9-201ENST00000463217 LTBP3Q9NS15 1303 aa16.54■□□□□ 0.24
RPL3P9-201ENST00000463217 HDGFL1Q5TGJ6 251 aa16.54■□□□□ 0.24
RPL3P9-201ENST00000463217 PPP1R42Q7Z4L9 355 aa16.54■□□□□ 0.24
RPL3P9-201ENST00000463217 MBIPQ9NS73 344 aa16.54■□□□□ 0.24
RPL3P9-201ENST00000463217 DBF4Q9UBU7 674 aaPredicted RBP16.54■□□□□ 0.24
RPL3P9-201ENST00000463217 FER1L6Q2WGJ9 1857 aa16.54■□□□□ 0.24
RPL3P9-201ENST00000463217 KDM2BQ8NHM5 1336 aa16.53■□□□□ 0.24
RPL3P9-201ENST00000463217 ALDH1B1P30837 517 aa16.53■□□□□ 0.24
RPL3P9-201ENST00000463217 PROSER3Q2NL68 480 aa16.53■□□□□ 0.24
RPL3P9-201ENST00000463217 PRPF40BQ6NWY9 871 aaKnown RBP16.53■□□□□ 0.24
RPL3P9-201ENST00000463217 ZNF526Q8TF50 670 aaPredicted RBP16.53■□□□□ 0.24
RPL3P9-201ENST00000463217 MRS2Q9HD23 443 aa16.53■□□□□ 0.24
RPL3P9-201ENST00000463217 ANKRD36CQ5JPF3 1778 aa16.53■□□□□ 0.24
RPL3P9-201ENST00000463217 SLX4Q8IY92 1834 aa16.52■□□□□ 0.24
RPL3P9-201ENST00000463217 UBN2Q6ZU65 1347 aa16.52■□□□□ 0.24
RPL3P9-201ENST00000463217 NFKBIEO00221 500 aa16.52■□□□□ 0.24
RPL3P9-201ENST00000463217 C21orf2O43822 256 aa16.52■□□□□ 0.24
RPL3P9-201ENST00000463217 CRY2Q49AN0 593 aa16.52■□□□□ 0.24
RPL3P9-201ENST00000463217 DUSP27Q5VZP5 1158 aa16.52■□□□□ 0.24
RPL3P9-201ENST00000463217 COPS6Q7L5N1 327 aa16.52■□□□□ 0.24
RPL3P9-201ENST00000463217 CACNA1SQ13698 1873 aa16.51■□□□□ 0.23
RPL3P9-201ENST00000463217 FAM177BA6PVY3 158 aa16.51■□□□□ 0.23
RPL3P9-201ENST00000463217 RASSF7Q02833 373 aa16.51■□□□□ 0.23
RPL3P9-201ENST00000463217 KRT24Q2M2I5 525 aa16.51■□□□□ 0.23
RPL3P9-201ENST00000463217 CCDC184Q52MB2 194 aa16.51■□□□□ 0.23
RPL3P9-201ENST00000463217 XAGE3Q8WTP9 111 aa16.51■□□□□ 0.23
RPL3P9-201ENST00000463217 HYPKQ9NX55 129 aa16.51■□□□□ 0.23
RPL3P9-201ENST00000463217 CHPF2Q9P2E5 772 aa16.51■□□□□ 0.23
RPL3P9-201ENST00000463217 DICER1Q9UPY3 1922 aaKnown RBP16.51■□□□□ 0.23
RPL3P9-201ENST00000463217 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
RPL3P9-201ENST00000463217 KIF3CO14782 793 aa16.5■□□□□ 0.23
RPL3P9-201ENST00000463217 NTSR2O95665 410 aa16.5■□□□□ 0.23
RPL3P9-201ENST00000463217 GPTP24298 496 aa16.5■□□□□ 0.23
RPL3P9-201ENST00000463217 SUSD4Q5VX71 490 aa16.5■□□□□ 0.23
RPL3P9-201ENST00000463217 TAOK3Q9H2K8 898 aa16.5■□□□□ 0.23
RPL3P9-201ENST00000463217 TIAM2Q8IVF5 1701 aa16.5■□□□□ 0.23
RPL3P9-201ENST00000463217 CCDC88AQ3V6T2 1871 aa16.5■□□□□ 0.23
RPL3P9-201ENST00000463217 ABCC12Q96J65 1359 aa16.5■□□□□ 0.23
RPL3P9-201ENST00000463217 IL16Q14005 1332 aa16.49■□□□□ 0.23
RPL3P9-201ENST00000463217 ANXA1P04083 346 aa16.49■□□□□ 0.23
RPL3P9-201ENST00000463217 HOXA10P31260 410 aaPredicted RBP16.49■□□□□ 0.23
RPL3P9-201ENST00000463217 TCIRG1Q13488 830 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms