RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 DLEC1Q9Y238 1755 aa11.28□□□□□ -0.6
TMEM254-208ENST00000463209 CACNA1SQ13698 1873 aa11.27□□□□□ -0.6
TMEM254-208ENST00000463209 CHL1O00533 1208 aa11.27□□□□□ -0.61
TMEM254-208ENST00000463209 KCNA3P22001 575 aa11.27□□□□□ -0.61
TMEM254-208ENST00000463209 ZBTB3Q9H5J0 574 aa11.27□□□□□ -0.61
TMEM254-208ENST00000463209 MBIPQ9NS73 344 aa11.27□□□□□ -0.61
TMEM254-208ENST00000463209 BCS1LQ9Y276 419 aa11.27□□□□□ -0.61
TMEM254-208ENST00000463209 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.61
TMEM254-208ENST00000463209 NUP98P52948 1817 aa11.26□□□□□ -0.61
TMEM254-208ENST00000463209 FAM9BQ8IZU0 186 aa11.26□□□□□ -0.61
TMEM254-208ENST00000463209 ZNF428Q96B54 188 aa11.26□□□□□ -0.61
TMEM254-208ENST00000463209 ELL2O00472 640 aaPredicted RBP11.25□□□□□ -0.61
TMEM254-208ENST00000463209 TGFB2P61812 414 aa11.25□□□□□ -0.61
TMEM254-208ENST00000463209 PDIA6Q15084 440 aa11.25□□□□□ -0.61
TMEM254-208ENST00000463209 PRR5LQ6MZQ0 368 aa11.25□□□□□ -0.61
TMEM254-208ENST00000463209 TSR2Q969E8 191 aaKnown RBP11.25□□□□□ -0.61
TMEM254-208ENST00000463209 ARFGEF1Q9Y6D6 1849 aa11.24□□□□□ -0.61
TMEM254-208ENST00000463209 NPHP1O15259 732 aa11.24□□□□□ -0.61
TMEM254-208ENST00000463209 GPTP24298 496 aa11.24□□□□□ -0.61
TMEM254-208ENST00000463209 AIMP1Q12904 312 aaKnown RBP11.24□□□□□ -0.61
TMEM254-208ENST00000463209 C2CD5Q86YS7 1000 aa11.24□□□□□ -0.61
TMEM254-208ENST00000463209 SETDB2Q96T68 719 aa11.24□□□□□ -0.61
TMEM254-208ENST00000463209 CHPF2Q9P2E5 772 aa11.24□□□□□ -0.61
TMEM254-208ENST00000463209 NIP7Q9Y221 180 aaKnown RBP eCLIP11.24□□□□□ -0.61
TMEM254-208ENST00000463209 GRIN3BO60391 1043 aa11.23□□□□□ -0.61
TMEM254-208ENST00000463209 ZNF853P0CG23 659 aa11.23□□□□□ -0.61
TMEM254-208ENST00000463209 MAPK8IP2Q13387 824 aaPredicted RBP11.23□□□□□ -0.61
TMEM254-208ENST00000463209 KIF6Q6ZMV9 814 aa11.23□□□□□ -0.61
TMEM254-208ENST00000463209 LRP10Q7Z4F1 713 aa11.23□□□□□ -0.61
TMEM254-208ENST00000463209 CNBD1Q8NA66 436 aa11.23□□□□□ -0.61
TMEM254-208ENST00000463209 CFAP44Q96MT7 982 aa11.23□□□□□ -0.61
TMEM254-208ENST00000463209 BABAM1Q9NWV8 329 aa11.23□□□□□ -0.61
TMEM254-208ENST00000463209 ZNF219Q9P2Y4 722 aaPredicted RBP11.23□□□□□ -0.61
TMEM254-208ENST00000463209 ANKRD36CQ5JPF3 1778 aa11.23□□□□□ -0.61
TMEM254-208ENST00000463209 TCERG1O14776 1098 aaKnown RBP11.22□□□□□ -0.61
TMEM254-208ENST00000463209 HDGFL1Q5TGJ6 251 aa11.22□□□□□ -0.61
TMEM254-208ENST00000463209 DUSP27Q5VZP5 1158 aa11.22□□□□□ -0.61
TMEM254-208ENST00000463209 MAP3K15Q6ZN16 1313 aa11.22□□□□□ -0.61
TMEM254-208ENST00000463209 UBN2Q6ZU65 1347 aa11.22□□□□□ -0.61
TMEM254-208ENST00000463209 NBPF5PQ86XG9 351 aaPredicted RBP11.22□□□□□ -0.61
TMEM254-208ENST00000463209 C8orf58Q8NAV2 365 aa11.22□□□□□ -0.61
TMEM254-208ENST00000463209 ZNF784Q8NCA9 323 aaPredicted RBP11.22□□□□□ -0.61
TMEM254-208ENST00000463209 XAGE3Q8WTP9 111 aa11.22□□□□□ -0.61
TMEM254-208ENST00000463209 ABCC12Q96J65 1359 aa11.22□□□□□ -0.61
TMEM254-208ENST00000463209 IFT57Q9NWB7 429 aa11.22□□□□□ -0.61
TMEM254-208ENST00000463209 PIM2Q9P1W9 311 aa11.22□□□□□ -0.61
TMEM254-208ENST00000463209 ZNF652Q9Y2D9 606 aa11.22□□□□□ -0.61
TMEM254-208ENST00000463209 DALRD3Q5D0E6 543 aaKnown RBP11.21□□□□□ -0.61
TMEM254-208ENST00000463209 ARHGAP27Q6ZUM4 889 aa11.21□□□□□ -0.61
TMEM254-208ENST00000463209 NUTM1Q86Y26 1132 aa11.21□□□□□ -0.61
TMEM254-208ENST00000463209 WWC1Q8IX03 1113 aa11.21□□□□□ -0.61
TMEM254-208ENST00000463209 ZNF526Q8TF50 670 aaPredicted RBP11.21□□□□□ -0.61
TMEM254-208ENST00000463209 ARFGEF2Q9Y6D5 1785 aa11.21□□□□□ -0.62
TMEM254-208ENST00000463209 ATP10DQ9P241 1426 aa11.2□□□□□ -0.62
TMEM254-208ENST00000463209 ERBB4Q15303 1308 aa11.2□□□□□ -0.62
TMEM254-208ENST00000463209 GNAI1P63096 354 aa11.2□□□□□ -0.62
TMEM254-208ENST00000463209 ST5P78524 1137 aa11.2□□□□□ -0.62
TMEM254-208ENST00000463209 RASSF7Q02833 373 aa11.2□□□□□ -0.62
TMEM254-208ENST00000463209 COPS6Q7L5N1 327 aa11.2□□□□□ -0.62
TMEM254-208ENST00000463209 TSPYL6Q8N831 410 aa11.2□□□□□ -0.62
TMEM254-208ENST00000463209 ZNF622Q969S3 477 aaKnown RBP eCLIP11.2□□□□□ -0.62
TMEM254-208ENST00000463209 H0YIN7 160 aa11.19□□□□□ -0.62
TMEM254-208ENST00000463209 ERFEQ4G0M1 354 aa11.19□□□□□ -0.62
TMEM254-208ENST00000463209 SUSD4Q5VX71 490 aa11.19□□□□□ -0.62
TMEM254-208ENST00000463209 CLEC4GQ6UXB4 293 aa11.19□□□□□ -0.62
TMEM254-208ENST00000463209 SLC51AQ86UW1 340 aa11.19□□□□□ -0.62
TMEM254-208ENST00000463209 BRIP1Q9BX63 1249 aa11.19□□□□□ -0.62
TMEM254-208ENST00000463209 DDX21Q9NR30 783 aaKnown RBP eCLIP11.19□□□□□ -0.62
TMEM254-208ENST00000463209 SLX4Q8IY92 1834 aa11.19□□□□□ -0.62
TMEM254-208ENST00000463209 ERVV-1B6SEH8 477 aa11.18□□□□□ -0.62
TMEM254-208ENST00000463209 CALD1Q05682 793 aaKnown RBP11.18□□□□□ -0.62
TMEM254-208ENST00000463209 C3orf67Q6ZVT6 689 aa11.18□□□□□ -0.62
TMEM254-208ENST00000463209 PHAXQ9H814 394 aaKnown RBP11.18□□□□□ -0.62
TMEM254-208ENST00000463209 SPINK5Q9NQ38 1064 aaPredicted RBP11.18□□□□□ -0.62
TMEM254-208ENST00000463209 LAMB2P55268 1798 aa11.18□□□□□ -0.62
TMEM254-208ENST00000463209 ADCY9O60503 1353 aa11.17□□□□□ -0.62
TMEM254-208ENST00000463209 FANCIQ9NVI1 1328 aa11.17□□□□□ -0.62
TMEM254-208ENST00000463209 C21orf2O43822 256 aa11.17□□□□□ -0.62
TMEM254-208ENST00000463209 GTF2E1P29083 439 aaPredicted RBP11.17□□□□□ -0.62
TMEM254-208ENST00000463209 PDE6BP35913 854 aa11.17□□□□□ -0.62
TMEM254-208ENST00000463209 CCDC27Q2M243 656 aa11.17□□□□□ -0.62
TMEM254-208ENST00000463209 OLFM4Q6UX06 510 aa11.17□□□□□ -0.62
TMEM254-208ENST00000463209 GIGYF2Q6Y7W6 1299 aaKnown RBP11.17□□□□□ -0.62
TMEM254-208ENST00000463209 ZNF34Q8IZ26 560 aa11.17□□□□□ -0.62
TMEM254-208ENST00000463209 TTLL6Q8N841 843 aa11.17□□□□□ -0.62
TMEM254-208ENST00000463209 TIAM2Q8IVF5 1701 aa11.17□□□□□ -0.62
TMEM254-208ENST00000463209 NTSR2O95665 410 aa11.16□□□□□ -0.62
TMEM254-208ENST00000463209 HOXB7P09629 217 aa11.16□□□□□ -0.62
TMEM254-208ENST00000463209 SRGNP10124 158 aa11.16□□□□□ -0.62
TMEM254-208ENST00000463209 PRELPP51888 382 aa11.16□□□□□ -0.62
TMEM254-208ENST00000463209 TPTE2Q6XPS3 522 aa11.16□□□□□ -0.62
TMEM254-208ENST00000463209 SYNE4Q8N205 404 aa11.16□□□□□ -0.62
TMEM254-208ENST00000463209 DBF4Q9UBU7 674 aaPredicted RBP11.16□□□□□ -0.62
TMEM254-208ENST00000463209 SBF1O95248 1867 aa11.16□□□□□ -0.62
TMEM254-208ENST00000463209 CCDC88AQ3V6T2 1871 aa11.15□□□□□ -0.62
TMEM254-208ENST00000463209 ATP5J2-PTCD1G3V325 749 aa11.15□□□□□ -0.62
TMEM254-208ENST00000463209 C9orf131Q5VYM1 1079 aa11.15□□□□□ -0.62
TMEM254-208ENST00000463209 PRPF40BQ6NWY9 871 aaKnown RBP11.15□□□□□ -0.62
TMEM254-208ENST00000463209 DDX60Q8IY21 1712 aaKnown RBP11.15□□□□□ -0.63
TMEM254-208ENST00000463209 RTL5Q5HYW3 569 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms