RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 LAS1LQ9Y4W2 734 aaKnown RBP17.09■□□□□ 0.33
HDAC1-203ENST00000463172 MYL6BP14649 208 aa17.08■□□□□ 0.32
HDAC1-203ENST00000463172 PRR5LQ6MZQ0 368 aa17.08■□□□□ 0.32
HDAC1-203ENST00000463172 TPTE2Q6XPS3 522 aa17.08■□□□□ 0.32
HDAC1-203ENST00000463172 NGEFQ8N5V2 710 aa17.08■□□□□ 0.32
HDAC1-203ENST00000463172 TTLL6Q8N841 843 aa17.08■□□□□ 0.32
HDAC1-203ENST00000463172 NIP7Q9Y221 180 aaKnown RBP eCLIP17.08■□□□□ 0.32
HDAC1-203ENST00000463172 ERVV-1B6SEH8 477 aa17.07■□□□□ 0.32
HDAC1-203ENST00000463172 EIF2S2P20042 333 aaKnown RBP17.07■□□□□ 0.32
HDAC1-203ENST00000463172 TRIM35Q9UPQ4 493 aa17.07■□□□□ 0.32
HDAC1-203ENST00000463172 ATP10DQ9P241 1426 aa17.06■□□□□ 0.32
HDAC1-203ENST00000463172 MAP3K15Q6ZN16 1313 aa17.06■□□□□ 0.32
HDAC1-203ENST00000463172 CHL1O00533 1208 aa17.06■□□□□ 0.32
HDAC1-203ENST00000463172 GTF2E1P29083 439 aaPredicted RBP17.06■□□□□ 0.32
HDAC1-203ENST00000463172 GPBP1L1Q9HC44 474 aaPredicted RBP17.06■□□□□ 0.32
HDAC1-203ENST00000463172 NUP98P52948 1817 aa17.05■□□□□ 0.32
HDAC1-203ENST00000463172 APAF1O14727 1248 aa17.05■□□□□ 0.32
HDAC1-203ENST00000463172 ZNF622Q969S3 477 aaKnown RBP eCLIP17.05■□□□□ 0.326e-16■□□□□ 9.3
HDAC1-203ENST00000463172 CFAP44Q96MT7 982 aa17.05■□□□□ 0.32
HDAC1-203ENST00000463172 NYXQ9GZU5 481 aa17.05■□□□□ 0.32
HDAC1-203ENST00000463172 ANKRD31Q8N7Z5 1873 aa17.05■□□□□ 0.32
HDAC1-203ENST00000463172 HOXB7P09629 217 aa17.04■□□□□ 0.32
HDAC1-203ENST00000463172 CHMP4AQ9BY43 222 aa17.04■□□□□ 0.32
HDAC1-203ENST00000463172 MRS2Q9HD23 443 aa17.04■□□□□ 0.32
HDAC1-203ENST00000463172 ADCY9O60503 1353 aa17.03■□□□□ 0.32
HDAC1-203ENST00000463172 GNAI1P63096 354 aa17.03■□□□□ 0.32
HDAC1-203ENST00000463172 CNKSR1Q969H4 720 aa17.03■□□□□ 0.32
HDAC1-203ENST00000463172 STYK1Q6J9G0 422 aa17.02■□□□□ 0.32
HDAC1-203ENST00000463172 MASTLQ96GX5 879 aa17.02■□□□□ 0.32
HDAC1-203ENST00000463172 IFT57Q9NWB7 429 aa17.02■□□□□ 0.32
HDAC1-203ENST00000463172 HLFQ16534 295 aa17.01■□□□□ 0.31
HDAC1-203ENST00000463172 HSP90AB3PQ58FF7 597 aa17.01■□□□□ 0.31
HDAC1-203ENST00000463172 SOGA3Q5TF21 947 aa17.01■□□□□ 0.31
HDAC1-203ENST00000463172 ZBTB3Q9H5J0 574 aa17.01■□□□□ 0.31
HDAC1-203ENST00000463172 FAM177BA6PVY3 158 aa17■□□□□ 0.31
HDAC1-203ENST00000463172 PARP10Q53GL7 1025 aa17■□□□□ 0.31
HDAC1-203ENST00000463172 HDGFL1Q5TGJ6 251 aa17■□□□□ 0.31
HDAC1-203ENST00000463172 C9orf131Q5VYM1 1079 aa17■□□□□ 0.31
HDAC1-203ENST00000463172 GIGYF2Q6Y7W6 1299 aaKnown RBP17■□□□□ 0.31
HDAC1-203ENST00000463172 TTLL7Q6ZT98 887 aa17■□□□□ 0.31
HDAC1-203ENST00000463172 PPP1R42Q7Z4L9 355 aa17■□□□□ 0.31
HDAC1-203ENST00000463172 CCDC24Q8N4L8 307 aa17■□□□□ 0.31
HDAC1-203ENST00000463172 DDX21Q9NR30 783 aaKnown RBP eCLIP17■□□□□ 0.31
HDAC1-203ENST00000463172 COL11A2P13942 1736 aaPredicted RBP16.99■□□□□ 0.31
HDAC1-203ENST00000463172 SRGNP10124 158 aa16.99■□□□□ 0.31
HDAC1-203ENST00000463172 NPR1P16066 1061 aa16.99■□□□□ 0.31
HDAC1-203ENST00000463172 ZNF526Q8TF50 670 aaPredicted RBP16.99■□□□□ 0.31
HDAC1-203ENST00000463172 RNF181Q9P0P0 153 aa16.99■□□□□ 0.31
HDAC1-203ENST00000463172 DBF4Q9UBU7 674 aaPredicted RBP16.99■□□□□ 0.31
HDAC1-203ENST00000463172 IBTKQ9P2D0 1353 aaPredicted RBP16.99■□□□□ 0.31
HDAC1-203ENST00000463172 SBF1O95248 1867 aa16.99■□□□□ 0.31
HDAC1-203ENST00000463172 NECTIN2Q92692 538 aa16.98■□□□□ 0.31
HDAC1-203ENST00000463172 MBIPQ9NS73 344 aa16.98■□□□□ 0.31
HDAC1-203ENST00000463172 CACNA1SQ13698 1873 aa16.98■□□□□ 0.31
HDAC1-203ENST00000463172 ZC3H4Q9UPT8 1303 aaKnown RBP16.97■□□□□ 0.31
HDAC1-203ENST00000463172 ARFGEF2Q9Y6D5 1785 aa16.97■□□□□ 0.31
HDAC1-203ENST00000463172 LMNB1P20700 586 aa16.97■□□□□ 0.31
HDAC1-203ENST00000463172 ALDH1B1P30837 517 aa16.97■□□□□ 0.31
HDAC1-203ENST00000463172 C1QTNF8P60827 252 aa16.97■□□□□ 0.31
HDAC1-203ENST00000463172 AIMP1Q12904 312 aaKnown RBP16.97■□□□□ 0.31
HDAC1-203ENST00000463172 PDIA6Q15084 440 aa16.97■□□□□ 0.31
HDAC1-203ENST00000463172 HYPKQ9NX55 129 aa16.97■□□□□ 0.31
HDAC1-203ENST00000463172 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.31
HDAC1-203ENST00000463172 ZNF853P0CG23 659 aa16.96■□□□□ 0.31
HDAC1-203ENST00000463172 GPTP24298 496 aa16.96■□□□□ 0.31
HDAC1-203ENST00000463172 CCDC27Q2M243 656 aa16.96■□□□□ 0.31
HDAC1-203ENST00000463172 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
HDAC1-203ENST00000463172 DUSP27Q5VZP5 1158 aa16.96■□□□□ 0.31
HDAC1-203ENST00000463172 COPS6Q7L5N1 327 aa16.96■□□□□ 0.31
HDAC1-203ENST00000463172 RNF123Q5XPI4 1314 aa16.96■□□□□ 0.3
HDAC1-203ENST00000463172 ANKRD36CQ5JPF3 1778 aa16.95■□□□□ 0.3
HDAC1-203ENST00000463172 KLRG2A4D1S0 409 aaPredicted RBP16.95■□□□□ 0.3
HDAC1-203ENST00000463172 C21orf2O43822 256 aa16.95■□□□□ 0.3
HDAC1-203ENST00000463172 CCDC184Q52MB2 194 aa16.95■□□□□ 0.3
HDAC1-203ENST00000463172 PRPF40BQ6NWY9 871 aaKnown RBP16.95■□□□□ 0.3
HDAC1-203ENST00000463172 ZNF34Q8IZ26 560 aa16.95■□□□□ 0.3
HDAC1-203ENST00000463172 XAGE3Q8WTP9 111 aa16.95■□□□□ 0.3
HDAC1-203ENST00000463172 CHPF2Q9P2E5 772 aa16.95■□□□□ 0.3
HDAC1-203ENST00000463172 CCDC88AQ3V6T2 1871 aa16.95■□□□□ 0.3
HDAC1-203ENST00000463172 ANXA1P04083 346 aa16.94■□□□□ 0.3
HDAC1-203ENST00000463172 KRT24Q2M2I5 525 aa16.94■□□□□ 0.3
HDAC1-203ENST00000463172 PROSER3Q2NL68 480 aa16.94■□□□□ 0.3
HDAC1-203ENST00000463172 LRP10Q7Z4F1 713 aa16.94■□□□□ 0.3
HDAC1-203ENST00000463172 RPGRQ92834 1020 aaKnown RBP16.94■□□□□ 0.3
HDAC1-203ENST00000463172 UTP14AQ9BVJ6 771 aaKnown RBP16.94■□□□□ 0.3
HDAC1-203ENST00000463172 ZNF219Q9P2Y4 722 aaPredicted RBP16.94■□□□□ 0.3
HDAC1-203ENST00000463172 RIC1Q4ADV7 1423 aa16.94■□□□□ 0.3
HDAC1-203ENST00000463172 SLX4Q8IY92 1834 aa16.93■□□□□ 0.3
HDAC1-203ENST00000463172 RASSF7Q02833 373 aa16.93■□□□□ 0.3
HDAC1-203ENST00000463172 SUSD4Q5VX71 490 aa16.93■□□□□ 0.3
HDAC1-203ENST00000463172 NUTM1Q86Y26 1132 aa16.93■□□□□ 0.3
HDAC1-203ENST00000463172 TAOK3Q9H2K8 898 aa16.93■□□□□ 0.3
HDAC1-203ENST00000463172 FER1L6Q2WGJ9 1857 aa16.93■□□□□ 0.3
HDAC1-203ENST00000463172 ERFEQ4G0M1 354 aa16.92■□□□□ 0.3
HDAC1-203ENST00000463172 CCDC93Q567U6 631 aa16.92■□□□□ 0.3
HDAC1-203ENST00000463172 PLBD2Q8NHP8 589 aa16.92■□□□□ 0.3
HDAC1-203ENST00000463172 NLRP3Q96P20 1036 aa16.92■□□□□ 0.3
HDAC1-203ENST00000463172 TMX4Q9H1E5 349 aaPredicted RBP16.92■□□□□ 0.3
HDAC1-203ENST00000463172 UBN2Q6ZU65 1347 aa16.92■□□□□ 0.3
HDAC1-203ENST00000463172 LTBP3Q9NS15 1303 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms