RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 HLFQ16534 295 aa17.32■□□□□ 0.36
C9orf3-210ENST00000462125 CNBD1Q8NA66 436 aa17.32■□□□□ 0.36
C9orf3-210ENST00000462125 TPTE2Q6XPS3 522 aa17.31■□□□□ 0.36
C9orf3-210ENST00000462125 LRP10Q7Z4F1 713 aa17.31■□□□□ 0.36
C9orf3-210ENST00000462125 CCDC24Q8N4L8 307 aa17.31■□□□□ 0.36
C9orf3-210ENST00000462125 NIP7Q9Y221 180 aaKnown RBP eCLIP17.31■□□□□ 0.36
C9orf3-210ENST00000462125 ARFGEF1Q9Y6D6 1849 aa17.31■□□□□ 0.36
C9orf3-210ENST00000462125 PDIA6Q15084 440 aa17.3■□□□□ 0.36
C9orf3-210ENST00000462125 TTLL7Q6ZT98 887 aa17.3■□□□□ 0.36
C9orf3-210ENST00000462125 NBPF5PQ86XG9 351 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-210ENST00000462125 NGEFQ8N5V2 710 aa17.3■□□□□ 0.36
C9orf3-210ENST00000462125 GPBP1L1Q9HC44 474 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-210ENST00000462125 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
C9orf3-210ENST00000462125 MAP3K15Q6ZN16 1313 aa17.29■□□□□ 0.36
C9orf3-210ENST00000462125 KLRG2A4D1S0 409 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-210ENST00000462125 SRGNP10124 158 aa17.29■□□□□ 0.36
C9orf3-210ENST00000462125 MYL6BP14649 208 aa17.29■□□□□ 0.36
C9orf3-210ENST00000462125 ST5P78524 1137 aa17.29■□□□□ 0.36
C9orf3-210ENST00000462125 LAMB4A4D0S4 1761 aa17.28■□□□□ 0.36
C9orf3-210ENST00000462125 APAF1O14727 1248 aa17.28■□□□□ 0.36
C9orf3-210ENST00000462125 EIF2S2P20042 333 aaKnown RBP17.28■□□□□ 0.36
C9orf3-210ENST00000462125 CCDC184Q52MB2 194 aa17.28■□□□□ 0.36
C9orf3-210ENST00000462125 C9orf131Q5VYM1 1079 aa17.28■□□□□ 0.36
C9orf3-210ENST00000462125 CFAP44Q96MT7 982 aa17.28■□□□□ 0.36
C9orf3-210ENST00000462125 NPHP1O15259 732 aa17.27■□□□□ 0.36
C9orf3-210ENST00000462125 STYK1Q6J9G0 422 aa17.27■□□□□ 0.36
C9orf3-210ENST00000462125 KIF6Q6ZMV9 814 aa17.27■□□□□ 0.36
C9orf3-210ENST00000462125 ZNF622Q969S3 477 aaKnown RBP eCLIP17.27■□□□□ 0.36
C9orf3-210ENST00000462125 ZNF853P0CG23 659 aa17.26■□□□□ 0.35
C9orf3-210ENST00000462125 ZNF526Q8TF50 670 aaPredicted RBP17.26■□□□□ 0.35
C9orf3-210ENST00000462125 CNKSR1Q969H4 720 aa17.26■□□□□ 0.35
C9orf3-210ENST00000462125 MASTLQ96GX5 879 aa17.26■□□□□ 0.35
C9orf3-210ENST00000462125 ANKRD31Q8N7Z5 1873 aa17.26■□□□□ 0.35
C9orf3-210ENST00000462125 HOXB7P09629 217 aa17.25■□□□□ 0.35
C9orf3-210ENST00000462125 KRT24Q2M2I5 525 aa17.25■□□□□ 0.35
C9orf3-210ENST00000462125 GIGYF2Q6Y7W6 1299 aaKnown RBP17.25■□□□□ 0.35
C9orf3-210ENST00000462125 ZNF34Q8IZ26 560 aa17.25■□□□□ 0.35
C9orf3-210ENST00000462125 LAS1LQ9Y4W2 734 aaKnown RBP17.25■□□□□ 0.35
C9orf3-210ENST00000462125 DLEC1Q9Y238 1755 aa17.25■□□□□ 0.35
C9orf3-210ENST00000462125 PROSER3Q2NL68 480 aa17.24■□□□□ 0.35
C9orf3-210ENST00000462125 NYXQ9GZU5 481 aa17.24■□□□□ 0.35
C9orf3-210ENST00000462125 ZBTB3Q9H5J0 574 aa17.24■□□□□ 0.35
C9orf3-210ENST00000462125 DDX21Q9NR30 783 aaKnown RBP eCLIP17.24■□□□□ 0.35
C9orf3-210ENST00000462125 KIF3CO14782 793 aa17.23■□□□□ 0.35
C9orf3-210ENST00000462125 NPR1P16066 1061 aa17.23■□□□□ 0.35
C9orf3-210ENST00000462125 LMNB1P20700 586 aa17.23■□□□□ 0.35
C9orf3-210ENST00000462125 PRELPP51888 382 aa17.23■□□□□ 0.35
C9orf3-210ENST00000462125 RNF181Q9P0P0 153 aa17.23■□□□□ 0.35
C9orf3-210ENST00000462125 FAM177BA6PVY3 158 aa17.22■□□□□ 0.35
C9orf3-210ENST00000462125 NFKBIEO00221 500 aa17.22■□□□□ 0.35
C9orf3-210ENST00000462125 ANP32CO43423 234 aa17.22■□□□□ 0.35
C9orf3-210ENST00000462125 C21orf2O43822 256 aa17.22■□□□□ 0.35
C9orf3-210ENST00000462125 ANXA1P04083 346 aa17.22■□□□□ 0.35
C9orf3-210ENST00000462125 CALD1Q05682 793 aaKnown RBP17.22■□□□□ 0.35
C9orf3-210ENST00000462125 SUSD4Q5VX71 490 aa17.22■□□□□ 0.35
C9orf3-210ENST00000462125 COPS6Q7L5N1 327 aa17.22■□□□□ 0.35
C9orf3-210ENST00000462125 C7orf43Q8WVR3 580 aa17.22■□□□□ 0.35
C9orf3-210ENST00000462125 MBIPQ9NS73 344 aa17.22■□□□□ 0.35
C9orf3-210ENST00000462125 IFT57Q9NWB7 429 aa17.22■□□□□ 0.35
C9orf3-210ENST00000462125 UBN2Q6ZU65 1347 aa17.21■□□□□ 0.35
C9orf3-210ENST00000462125 GTF2E1P29083 439 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-210ENST00000462125 RASSF7Q02833 373 aa17.21■□□□□ 0.35
C9orf3-210ENST00000462125 PRPF40BQ6NWY9 871 aaKnown RBP17.21■□□□□ 0.35
C9orf3-210ENST00000462125 ZC3H4Q9UPT8 1303 aaKnown RBP17.21■□□□□ 0.34
C9orf3-210ENST00000462125 IBTKQ9P2D0 1353 aaPredicted RBP17.2■□□□□ 0.34
C9orf3-210ENST00000462125 GPTP24298 496 aa17.2■□□□□ 0.34
C9orf3-210ENST00000462125 GNAI1P63096 354 aa17.2■□□□□ 0.34
C9orf3-210ENST00000462125 CRY2Q49AN0 593 aa17.2■□□□□ 0.34
C9orf3-210ENST00000462125 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
C9orf3-210ENST00000462125 PARP10Q53GL7 1025 aa17.2■□□□□ 0.34
C9orf3-210ENST00000462125 NECTIN2Q92692 538 aa17.2■□□□□ 0.34
C9orf3-210ENST00000462125 SBF1O95248 1867 aa17.2■□□□□ 0.34
C9orf3-210ENST00000462125 NUP98P52948 1817 aa17.19■□□□□ 0.34
C9orf3-210ENST00000462125 ALDH1B1P30837 517 aa17.19■□□□□ 0.34
C9orf3-210ENST00000462125 CCDC27Q2M243 656 aa17.19■□□□□ 0.34
C9orf3-210ENST00000462125 ERFEQ4G0M1 354 aa17.19■□□□□ 0.34
C9orf3-210ENST00000462125 SOGA3Q5TF21 947 aa17.19■□□□□ 0.34
C9orf3-210ENST00000462125 HDGFL1Q5TGJ6 251 aa17.19■□□□□ 0.34
C9orf3-210ENST00000462125 DUSP27Q5VZP5 1158 aa17.19■□□□□ 0.34
C9orf3-210ENST00000462125 NUTM1Q86Y26 1132 aa17.19■□□□□ 0.34
C9orf3-210ENST00000462125 XAGE3Q8WTP9 111 aa17.19■□□□□ 0.34
C9orf3-210ENST00000462125 DBF4Q9UBU7 674 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-210ENST00000462125 LTBP3Q9NS15 1303 aa17.19■□□□□ 0.34
C9orf3-210ENST00000462125 NTSR2O95665 410 aa17.18■□□□□ 0.34
C9orf3-210ENST00000462125 TCIRG1Q13488 830 aa17.18■□□□□ 0.34
C9orf3-210ENST00000462125 HSP90AB3PQ58FF7 597 aa17.18■□□□□ 0.34
C9orf3-210ENST00000462125 SLC10A5Q5PT55 438 aa17.18■□□□□ 0.34
C9orf3-210ENST00000462125 PPP1R42Q7Z4L9 355 aa17.18■□□□□ 0.34
C9orf3-210ENST00000462125 CHPF2Q9P2E5 772 aa17.18■□□□□ 0.34
C9orf3-210ENST00000462125 ZNF219Q9P2Y4 722 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-210ENST00000462125 COL11A2P13942 1736 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-210ENST00000462125 HOXA10P31260 410 aaPredicted RBP17.17■□□□□ 0.34
C9orf3-210ENST00000462125 AIMP1Q12904 312 aaKnown RBP17.17■□□□□ 0.34
C9orf3-210ENST00000462125 RIC1Q4ADV7 1423 aa17.17■□□□□ 0.34
C9orf3-210ENST00000462125 MRS2Q9HD23 443 aa17.17■□□□□ 0.34
C9orf3-210ENST00000462125 NMRK2Q9NPI5 230 aa17.17■□□□□ 0.34
C9orf3-210ENST00000462125 KDM2BQ8NHM5 1336 aa17.17■□□□□ 0.34
C9orf3-210ENST00000462125 SLX4Q8IY92 1834 aa17.17■□□□□ 0.34
C9orf3-210ENST00000462125 ABCC12Q96J65 1359 aa17.16■□□□□ 0.34
C9orf3-210ENST00000462125 TOMM70O94826 608 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms