RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 SPTLC3Q9NUV7 552 aa22.11■■□□□ 1.13
HPS3-204ENST00000462030 PRDM4Q9UKN5 801 aa22.11■■□□□ 1.13
HPS3-204ENST00000462030 LTKP29376 864 aa22.1■■□□□ 1.13
HPS3-204ENST00000462030 ST3GAL1Q11201 340 aa22.09■■□□□ 1.13
HPS3-204ENST00000462030 LTV1Q96GA3 475 aaPredicted RBP22.09■■□□□ 1.13
HPS3-204ENST00000462030 SLC26A8Q96RN1 970 aa22.09■■□□□ 1.13
HPS3-204ENST00000462030 FAM177BA6PVY3 158 aa22.09■■□□□ 1.13
HPS3-204ENST00000462030 HOXC9P31274 260 aa22.09■■□□□ 1.13
HPS3-204ENST00000462030 HMGN5P82970 282 aaKnown RBP22.09■■□□□ 1.13
HPS3-204ENST00000462030 NUTM2GQ5VZR2 741 aa22.09■■□□□ 1.13
HPS3-204ENST00000462030 JAKMIP1Q96N16 626 aaKnown RBP22.09■■□□□ 1.13
HPS3-204ENST00000462030 PRPF40BQ6NWY9 871 aaKnown RBP22.08■■□□□ 1.13
HPS3-204ENST00000462030 DDX54Q8TDD1 881 aaKnown RBP22.08■■□□□ 1.13
HPS3-204ENST00000462030 DIAPH3Q9NSV4 1193 aa22.08■■□□□ 1.13
HPS3-204ENST00000462030 PDRG1Q9NUG6 133 aa22.08■■□□□ 1.13
HPS3-204ENST00000462030 GTF2F1P35269 517 aaKnown RBP eCLIP22.08■■□□□ 1.13
HPS3-204ENST00000462030 KCNF1Q9H3M0 494 aa22.08■■□□□ 1.13
HPS3-204ENST00000462030 NLRP6P59044 892 aa22.07■■□□□ 1.12
HPS3-204ENST00000462030 CCDC94Q9BW85 323 aaPredicted RBP22.07■■□□□ 1.12
HPS3-204ENST00000462030 VPS37CA5D8V6 355 aaPredicted RBP22.07■■□□□ 1.12
HPS3-204ENST00000462030 BEND3Q5T5X7 828 aa22.07■■□□□ 1.12
HPS3-204ENST00000462030 USHBP1Q8N6Y0 703 aa22.07■■□□□ 1.12
HPS3-204ENST00000462030 BABAM1Q9NWV8 329 aa22.07■■□□□ 1.12
HPS3-204ENST00000462030 USP42Q9H9J4 1324 aaKnown RBP22.06■■□□□ 1.12
HPS3-204ENST00000462030 PYCARDQ9ULZ3 195 aa22.06■■□□□ 1.12
HPS3-204ENST00000462030 PI4KAP2A4QPH2 592 aa22.06■■□□□ 1.12
HPS3-204ENST00000462030 GLRX3O76003 335 aaKnown RBP22.06■■□□□ 1.12
HPS3-204ENST00000462030 OS9Q13438 667 aaPredicted RBP22.06■■□□□ 1.12
HPS3-204ENST00000462030 VPS53Q5VIR6 699 aa22.06■■□□□ 1.12
HPS3-204ENST00000462030 PI4KAP1Q8N8J0 262 aa22.06■■□□□ 1.12
HPS3-204ENST00000462030 PRDM10Q9NQV6 1147 aa22.06■■□□□ 1.12
HPS3-204ENST00000462030 CHPF2Q9P2E5 772 aa22.06■■□□□ 1.12
HPS3-204ENST00000462030 PLEKHG1Q9ULL1 1385 aa22.05■■□□□ 1.12
HPS3-204ENST00000462030 TTC41PQ6P2S7 1318 aa22.05■■□□□ 1.12
HPS3-204ENST00000462030 ANXA1P04083 346 aa22.05■■□□□ 1.12
HPS3-204ENST00000462030 SMAP1Q8IYB5 467 aaPredicted RBP22.05■■□□□ 1.12
HPS3-204ENST00000462030 NECAB1Q8N987 351 aa22.05■■□□□ 1.12
HPS3-204ENST00000462030 SPC24Q8NBT2 197 aa22.05■■□□□ 1.12
HPS3-204ENST00000462030 ME3Q16798 604 aa22.05■■□□□ 1.12
HPS3-204ENST00000462030 DNAAF4Q8WXU2 420 aa22.05■■□□□ 1.12
HPS3-204ENST00000462030 KIAA1524Q8TCG1 905 aa22.04■■□□□ 1.12
HPS3-204ENST00000462030 ZSWIM6Q9HCJ5 1215 aa22.04■■□□□ 1.12
HPS3-204ENST00000462030 CYP46A1Q9Y6A2 500 aa22.04■■□□□ 1.12
HPS3-204ENST00000462030 MARF1Q9Y4F3 1742 aaKnown RBP22.03■■□□□ 1.12
HPS3-204ENST00000462030 RUFY2Q8WXA3 655 aa22.03■■□□□ 1.12
HPS3-204ENST00000462030 COL9A3Q14050 684 aaPredicted RBP22.03■■□□□ 1.12
HPS3-204ENST00000462030 HSP90AB4PQ58FF6 505 aa22.03■■□□□ 1.12
HPS3-204ENST00000462030 ZSCAN31Q96LW9 406 aaPredicted RBP22.03■■□□□ 1.12
HPS3-204ENST00000462030 SH2B1Q9NRF2 756 aaPredicted RBP22.03■■□□□ 1.12
HPS3-204ENST00000462030 KIF3AQ9Y496 699 aa22.03■■□□□ 1.12
HPS3-204ENST00000462030 DIP2AQ14689 1571 aa22.03■■□□□ 1.12
HPS3-204ENST00000462030 AMOTL2Q9Y2J4 779 aa22.02■■□□□ 1.12
HPS3-204ENST00000462030 EIF4A1P60842 406 aaKnown RBP22.02■■□□□ 1.12
HPS3-204ENST00000462030 TTC6Q86TZ1 520 aa22.02■■□□□ 1.12
HPS3-204ENST00000462030 TM6SF1Q9BZW5 370 aa22.02■■□□□ 1.12
HPS3-204ENST00000462030 CHMP3Q9Y3E7 222 aa22.02■■□□□ 1.12
HPS3-204ENST00000462030 KCNB2Q92953 911 aa22.01■■□□□ 1.11
HPS3-204ENST00000462030 KCNQ3O43525 872 aa22.01■■□□□ 1.11
HPS3-204ENST00000462030 CCDC192P0DO97 292 aa22.01■■□□□ 1.11
HPS3-204ENST00000462030 NECTIN1Q15223 517 aa22.01■■□□□ 1.11
HPS3-204ENST00000462030 FAM173BQ6P4H8 233 aa22.01■■□□□ 1.11
HPS3-204ENST00000462030 FERMT3Q86UX7 667 aa22.01■■□□□ 1.11
HPS3-204ENST00000462030 CLASRPQ8N2M8 674 aaKnown RBP22.01■■□□□ 1.11
HPS3-204ENST00000462030 ECHDC1Q9NTX5 307 aa22.01■■□□□ 1.11
HPS3-204ENST00000462030 TPCN1Q9ULQ1 816 aa22.01■■□□□ 1.11
HPS3-204ENST00000462030 ADCY9O60503 1353 aa22.01■■□□□ 1.11
HPS3-204ENST00000462030 BCL2L12Q9HB09 334 aa22■■□□□ 1.11
HPS3-204ENST00000462030 PA2G4Q9UQ80 394 aaKnown RBP22■■□□□ 1.11
HPS3-204ENST00000462030 CCDC171Q6TFL3 1326 aa22■■□□□ 1.11
HPS3-204ENST00000462030 CEMIPQ8WUJ3 1361 aa22■■□□□ 1.11
HPS3-204ENST00000462030 CDC37L1Q7L3B6 337 aa22■■□□□ 1.11
HPS3-204ENST00000462030 LGR6Q9HBX8 967 aa22■■□□□ 1.11
HPS3-204ENST00000462030 LIG1P18858 919 aa21.99■■□□□ 1.11
HPS3-204ENST00000462030 RBM8AQ9Y5S9 174 aaKnown RBP21.99■■□□□ 1.11
HPS3-204ENST00000462030 CAMK4Q16566 473 aa21.99■■□□□ 1.11
HPS3-204ENST00000462030 LARP1BQ659C4 914 aaKnown RBP21.98■■□□□ 1.11
HPS3-204ENST00000462030 CREB3L3Q68CJ9 461 aa21.98■■□□□ 1.11
HPS3-204ENST00000462030 KLHL34Q8N239 644 aa21.98■■□□□ 1.11
HPS3-204ENST00000462030 CHD2O14647 1828 aaKnown RBP21.98■■□□□ 1.11
HPS3-204ENST00000462030 KDM3BQ7LBC6 1761 aa21.98■■□□□ 1.11
HPS3-204ENST00000462030 FAM227BQ96M60 508 aa21.98■■□□□ 1.11
HPS3-204ENST00000462030 KRT85P78386 507 aa21.97■■□□□ 1.11
HPS3-204ENST00000462030 FAM200AQ8TCP9 573 aa21.97■■□□□ 1.11
HPS3-204ENST00000462030 MRVI1Q9Y6F6 885 aa21.97■■□□□ 1.11
HPS3-204ENST00000462030 MED1Q15648 1581 aaPredicted RBP21.97■■□□□ 1.11
HPS3-204ENST00000462030 RIOK3O14730 519 aaKnown RBP21.97■■□□□ 1.11
HPS3-204ENST00000462030 IFIT2P09913 472 aaKnown RBP21.97■■□□□ 1.11
HPS3-204ENST00000462030 MTX1Q13505 466 aa21.97■■□□□ 1.11
HPS3-204ENST00000462030 NUP62CLQ9H1M0 184 aa21.97■■□□□ 1.11
HPS3-204ENST00000462030 ZKSCAN1P17029 563 aaPredicted RBP21.96■■□□□ 1.11
HPS3-204ENST00000462030 PTGS1P23219 599 aa21.96■■□□□ 1.11
HPS3-204ENST00000462030 MAP3K11Q16584 847 aa21.96■■□□□ 1.11
HPS3-204ENST00000462030 LUZP1Q86V48 1076 aa21.96■■□□□ 1.11
HPS3-204ENST00000462030 TCEANC2Q96MN5 208 aa21.96■■□□□ 1.11
HPS3-204ENST00000462030 TPM3P06753 285 aa21.96■■□□□ 1.11
HPS3-204ENST00000462030 KCNJ4P48050 445 aa21.96■■□□□ 1.11
HPS3-204ENST00000462030 TYRO3Q06418 890 aa21.96■■□□□ 1.11
HPS3-204ENST00000462030 EVI5LQ96CN4 794 aa21.96■■□□□ 1.11
HPS3-204ENST00000462030 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.96■■□□□ 1.11
HPS3-204ENST00000462030 PPP4R3BQ5MIZ7 849 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms