RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 LAS1LQ9Y4W2 734 aaKnown RBP11.61□□□□□ -0.55
LDB1-203ENST00000461873 PRAMEF22A3QJZ6 481 aa11.6□□□□□ -0.55
LDB1-203ENST00000461873 FAM177BA6PVY3 158 aa11.6□□□□□ -0.55
LDB1-203ENST00000461873 CAMTA2O94983 1202 aa11.6□□□□□ -0.55
LDB1-203ENST00000461873 MYL6BP14649 208 aa11.6□□□□□ -0.55
LDB1-203ENST00000461873 SOGA3Q5TF21 947 aa11.6□□□□□ -0.55
LDB1-203ENST00000461873 NYXQ9GZU5 481 aa11.6□□□□□ -0.55
LDB1-203ENST00000461873 ZNF219Q9P2Y4 722 aaPredicted RBP11.6□□□□□ -0.55
LDB1-203ENST00000461873 PRR5LQ6MZQ0 368 aa11.59□□□□□ -0.55
LDB1-203ENST00000461873 CCDC24Q8N4L8 307 aa11.59□□□□□ -0.55
LDB1-203ENST00000461873 RUNDC1Q96C34 613 aa11.59□□□□□ -0.55
LDB1-203ENST00000461873 MASTLQ96GX5 879 aa11.59□□□□□ -0.55
LDB1-203ENST00000461873 THUMPD2Q9BTF0 503 aaKnown RBP11.59□□□□□ -0.55
LDB1-203ENST00000461873 TMX4Q9H1E5 349 aaPredicted RBP11.59□□□□□ -0.55
LDB1-203ENST00000461873 BRCA1P38398 1863 aaKnown RBP11.59□□□□□ -0.55
LDB1-203ENST00000461873 ADCY9O60503 1353 aa11.58□□□□□ -0.56
LDB1-203ENST00000461873 RGL2O15211 777 aa11.58□□□□□ -0.56
LDB1-203ENST00000461873 EIF2S2P20042 333 aaKnown RBP11.58□□□□□ -0.56
LDB1-203ENST00000461873 LMNB1P20700 586 aa11.58□□□□□ -0.56
LDB1-203ENST00000461873 TMPOP42166 694 aaKnown RBP11.58□□□□□ -0.56
LDB1-203ENST00000461873 EIF4A1P60842 406 aaKnown RBP11.58□□□□□ -0.56
LDB1-203ENST00000461873 DPY19L2Q6NUT2 758 aa11.58□□□□□ -0.56
LDB1-203ENST00000461873 CCDC146Q8IYE0 955 aa11.58□□□□□ -0.56
LDB1-203ENST00000461873 BABAM1Q9NWV8 329 aa11.58□□□□□ -0.56
LDB1-203ENST00000461873 SCN7AQ01118 1682 aa11.58□□□□□ -0.56
LDB1-203ENST00000461873 KIAA1551Q9HCM1 1747 aa11.57□□□□□ -0.56
LDB1-203ENST00000461873 C21orf2O43822 256 aa11.57□□□□□ -0.56
LDB1-203ENST00000461873 STYK1Q6J9G0 422 aa11.57□□□□□ -0.56
LDB1-203ENST00000461873 ERVV-1B6SEH8 477 aa11.56□□□□□ -0.56
LDB1-203ENST00000461873 TOMM70O94826 608 aa11.56□□□□□ -0.56
LDB1-203ENST00000461873 ALDH1B1P30837 517 aa11.56□□□□□ -0.56
LDB1-203ENST00000461873 CALD1Q05682 793 aaKnown RBP11.56□□□□□ -0.56
LDB1-203ENST00000461873 NRXN2Q9P2S2 1712 aa11.56□□□□□ -0.56
LDB1-203ENST00000461873 ERBB4Q15303 1308 aa11.56□□□□□ -0.56
LDB1-203ENST00000461873 ZC3H4Q9UPT8 1303 aaKnown RBP11.56□□□□□ -0.56
LDB1-203ENST00000461873 LAMB4A4D0S4 1761 aa11.55□□□□□ -0.56
LDB1-203ENST00000461873 NBPF26B4DH59 902 aa11.55□□□□□ -0.56
LDB1-203ENST00000461873 NPR1P16066 1061 aa11.55□□□□□ -0.56
LDB1-203ENST00000461873 RASSF7Q02833 373 aa11.55□□□□□ -0.56
LDB1-203ENST00000461873 NBPF10Q6P3W6 841 aaKnown RBP11.55□□□□□ -0.56
LDB1-203ENST00000461873 PPP1R42Q7Z4L9 355 aa11.55□□□□□ -0.56
LDB1-203ENST00000461873 NBPF15Q8N660 670 aa11.55□□□□□ -0.56
LDB1-203ENST00000461873 RPGRQ92834 1020 aaKnown RBP11.55□□□□□ -0.56
LDB1-203ENST00000461873 TAOK3Q9H2K8 898 aa11.55□□□□□ -0.56
LDB1-203ENST00000461873 ZBTB3Q9H5J0 574 aa11.55□□□□□ -0.56
LDB1-203ENST00000461873 MAP3K15Q6ZN16 1313 aa11.55□□□□□ -0.56
LDB1-203ENST00000461873 BCORQ6W2J9 1755 aa11.54□□□□□ -0.56
LDB1-203ENST00000461873 SRGNP10124 158 aa11.54□□□□□ -0.56
LDB1-203ENST00000461873 HSPA6P17066 643 aa11.54□□□□□ -0.56
LDB1-203ENST00000461873 ERFEQ4G0M1 354 aa11.54□□□□□ -0.56
LDB1-203ENST00000461873 HSP90AB3PQ58FF7 597 aa11.54□□□□□ -0.56
LDB1-203ENST00000461873 CHMP4AQ9BY43 222 aa11.54□□□□□ -0.56
LDB1-203ENST00000461873 PRKRIP1Q9H875 184 aaPredicted RBP11.54□□□□□ -0.56
LDB1-203ENST00000461873 RRAGCQ9HB90 399 aa11.54□□□□□ -0.56
LDB1-203ENST00000461873 KDM3BQ7LBC6 1761 aa11.54□□□□□ -0.56
LDB1-203ENST00000461873 DLEC1Q9Y238 1755 aa11.54□□□□□ -0.56
LDB1-203ENST00000461873 KIF3CO14782 793 aa11.53□□□□□ -0.56
LDB1-203ENST00000461873 GPTP24298 496 aa11.53□□□□□ -0.56
LDB1-203ENST00000461873 AIMP1Q12904 312 aaKnown RBP11.53□□□□□ -0.56
LDB1-203ENST00000461873 HLFQ16534 295 aa11.53□□□□□ -0.56
LDB1-203ENST00000461873 CCDC93Q567U6 631 aa11.53□□□□□ -0.56
LDB1-203ENST00000461873 PRPF40BQ6NWY9 871 aaKnown RBP11.53□□□□□ -0.56
LDB1-203ENST00000461873 NECTIN2Q92692 538 aa11.53□□□□□ -0.56
LDB1-203ENST00000461873 NMRK2Q9NPI5 230 aa11.53□□□□□ -0.56
LDB1-203ENST00000461873 ADAMTS8Q9UP79 889 aa11.53□□□□□ -0.56
LDB1-203ENST00000461873 VEGFAP15692 232 aaPredicted RBP11.52□□□□□ -0.57
LDB1-203ENST00000461873 APLP1P51693 650 aa11.52□□□□□ -0.57
LDB1-203ENST00000461873 PARP10Q53GL7 1025 aa11.52□□□□□ -0.57
LDB1-203ENST00000461873 RTKN2Q8IZC4 609 aa11.52□□□□□ -0.57
LDB1-203ENST00000461873 RBM17Q96I25 401 aaKnown RBP11.52□□□□□ -0.57
LDB1-203ENST00000461873 SBF1O95248 1867 aa11.52□□□□□ -0.57
LDB1-203ENST00000461873 CACNA1SQ13698 1873 aa11.52□□□□□ -0.57
LDB1-203ENST00000461873 CCDC88AQ3V6T2 1871 aa11.52□□□□□ -0.57
LDB1-203ENST00000461873 GLTPD2A6NH11 291 aa11.51□□□□□ -0.57
LDB1-203ENST00000461873 ANP32CO43423 234 aa11.51□□□□□ -0.57
LDB1-203ENST00000461873 GIGYF2Q6Y7W6 1299 aaKnown RBP11.51□□□□□ -0.57
LDB1-203ENST00000461873 TTLL7Q6ZT98 887 aa11.51□□□□□ -0.57
LDB1-203ENST00000461873 RBM46Q8TBY0 533 aaKnown RBP11.51□□□□□ -0.57
LDB1-203ENST00000461873 NLRP3Q96P20 1036 aa11.51□□□□□ -0.57
LDB1-203ENST00000461873 FSTL1Q12841 308 aa11.5□□□□□ -0.57
LDB1-203ENST00000461873 HDGFL1Q5TGJ6 251 aa11.5□□□□□ -0.57
LDB1-203ENST00000461873 NUTM1Q86Y26 1132 aa11.5□□□□□ -0.57
LDB1-203ENST00000461873 SMC1BQ8NDV3 1235 aa11.5□□□□□ -0.57
LDB1-203ENST00000461873 UTP14AQ9BVJ6 771 aaKnown RBP11.5□□□□□ -0.57
LDB1-203ENST00000461873 NUP98P52948 1817 aa11.5□□□□□ -0.57
LDB1-203ENST00000461873 ANKRD31Q8N7Z5 1873 aa11.5□□□□□ -0.57
LDB1-203ENST00000461873 NFKBIEO00221 500 aa11.49□□□□□ -0.57
LDB1-203ENST00000461873 GNAI1P63096 354 aa11.49□□□□□ -0.57
LDB1-203ENST00000461873 GRIPAP1Q4V328 841 aa11.49□□□□□ -0.57
LDB1-203ENST00000461873 CC2D2BQ6DHV5 1058 aa11.49□□□□□ -0.57
LDB1-203ENST00000461873 COPS6Q7L5N1 327 aa11.49□□□□□ -0.57
LDB1-203ENST00000461873 JDP2Q8WYK2 163 aa11.49□□□□□ -0.57
LDB1-203ENST00000461873 CFAP44Q96MT7 982 aa11.49□□□□□ -0.57
LDB1-203ENST00000461873 DDX21Q9NR30 783 aaKnown RBP eCLIP11.49□□□□□ -0.57
LDB1-203ENST00000461873 DBF4Q9UBU7 674 aaPredicted RBP11.49□□□□□ -0.57
LDB1-203ENST00000461873 CHL1O00533 1208 aa11.48□□□□□ -0.57
LDB1-203ENST00000461873 APAF1O14727 1248 aa11.48□□□□□ -0.57
LDB1-203ENST00000461873 HOXB7P09629 217 aa11.48□□□□□ -0.57
LDB1-203ENST00000461873 XAGE3Q8WTP9 111 aa11.48□□□□□ -0.57
LDB1-203ENST00000461873 LTBP3Q9NS15 1303 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms