RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ZNF526Q8TF50 670 aaPredicted RBP20.1■□□□□ 0.81
VARS-219ENST00000461328 BRIP1Q9BX63 1249 aa20.1■□□□□ 0.81
VARS-219ENST00000461328 TRIM35Q9UPQ4 493 aa20.1■□□□□ 0.81
VARS-219ENST00000461328 RGL2O15211 777 aa20.09■□□□□ 0.81
VARS-219ENST00000461328 MYL6BP14649 208 aa20.09■□□□□ 0.81
VARS-219ENST00000461328 ST5P78524 1137 aa20.09■□□□□ 0.81
VARS-219ENST00000461328 GPBP1L1Q9HC44 474 aaPredicted RBP20.09■□□□□ 0.81
VARS-219ENST00000461328 NBPF5PQ86XG9 351 aaPredicted RBP20.08■□□□□ 0.81
VARS-219ENST00000461328 TTLL6Q8N841 843 aa20.08■□□□□ 0.81
VARS-219ENST00000461328 PDZRN3Q9UPQ7 1066 aa20.08■□□□□ 0.81
VARS-219ENST00000461328 NIP7Q9Y221 180 aaKnown RBP eCLIP20.08■□□□□ 0.81
VARS-219ENST00000461328 DLEC1Q9Y238 1755 aa20.08■□□□□ 0.8
VARS-219ENST00000461328 KIF6Q6ZMV9 814 aa20.07■□□□□ 0.8
VARS-219ENST00000461328 ANKRD31Q8N7Z5 1873 aa20.07■□□□□ 0.8
VARS-219ENST00000461328 ERBB4Q15303 1308 aa20.06■□□□□ 0.8
VARS-219ENST00000461328 EIF2S2P20042 333 aaKnown RBP20.06■□□□□ 0.8
VARS-219ENST00000461328 HLFQ16534 295 aa20.06■□□□□ 0.8
VARS-219ENST00000461328 ZNF622Q969S3 477 aaKnown RBP eCLIP20.06■□□□□ 0.8
VARS-219ENST00000461328 MAP3K15Q6ZN16 1313 aa20.05■□□□□ 0.8
VARS-219ENST00000461328 C1QTNF8P60827 252 aa20.05■□□□□ 0.8
VARS-219ENST00000461328 CALD1Q05682 793 aaKnown RBP20.05■□□□□ 0.8
VARS-219ENST00000461328 C9orf131Q5VYM1 1079 aa20.05■□□□□ 0.8
VARS-219ENST00000461328 FAM177BA6PVY3 158 aa20.04■□□□□ 0.8
VARS-219ENST00000461328 ERVV-1B6SEH8 477 aa20.04■□□□□ 0.8
VARS-219ENST00000461328 CHL1O00533 1208 aa20.04■□□□□ 0.8
VARS-219ENST00000461328 TPTE2Q6XPS3 522 aa20.04■□□□□ 0.8
VARS-219ENST00000461328 TTLL7Q6ZT98 887 aa20.04■□□□□ 0.8
VARS-219ENST00000461328 SENP3-EIF4A1A0A087X0R7 540 aa20.03■□□□□ 0.8
VARS-219ENST00000461328 COL11A2P13942 1736 aaPredicted RBP20.02■□□□□ 0.8
VARS-219ENST00000461328 ZBTB3Q9H5J0 574 aa20.02■□□□□ 0.8
VARS-219ENST00000461328 RNF181Q9P0P0 153 aa20.02■□□□□ 0.8
VARS-219ENST00000461328 GTF2E1P29083 439 aaPredicted RBP20.01■□□□□ 0.79
VARS-219ENST00000461328 RASSF7Q02833 373 aa20.01■□□□□ 0.79
VARS-219ENST00000461328 NECTIN2Q92692 538 aa20.01■□□□□ 0.79
VARS-219ENST00000461328 CFAP44Q96MT7 982 aa20.01■□□□□ 0.79
VARS-219ENST00000461328 SRGNP10124 158 aa20■□□□□ 0.79
VARS-219ENST00000461328 KRT24Q2M2I5 525 aa20■□□□□ 0.79
VARS-219ENST00000461328 STYK1Q6J9G0 422 aa20■□□□□ 0.79
VARS-219ENST00000461328 CNKSR1Q969H4 720 aa20■□□□□ 0.79
VARS-219ENST00000461328 MASTLQ96GX5 879 aa20■□□□□ 0.79
VARS-219ENST00000461328 ANXA1P04083 346 aa19.99■□□□□ 0.79
VARS-219ENST00000461328 GPTP24298 496 aa19.99■□□□□ 0.79
VARS-219ENST00000461328 PDIA6Q15084 440 aa19.99■□□□□ 0.79
VARS-219ENST00000461328 PROSER3Q2NL68 480 aa19.99■□□□□ 0.79
VARS-219ENST00000461328 NYXQ9GZU5 481 aa19.99■□□□□ 0.79
VARS-219ENST00000461328 MBIPQ9NS73 344 aa19.99■□□□□ 0.79
VARS-219ENST00000461328 IFT57Q9NWB7 429 aa19.99■□□□□ 0.79
VARS-219ENST00000461328 ZNF219Q9P2Y4 722 aaPredicted RBP19.99■□□□□ 0.79
VARS-219ENST00000461328 NUP98P52948 1817 aa19.98■□□□□ 0.79
VARS-219ENST00000461328 C21orf2O43822 256 aa19.98■□□□□ 0.79
VARS-219ENST00000461328 GNAI1P63096 354 aa19.98■□□□□ 0.79
VARS-219ENST00000461328 LRP10Q7Z4F1 713 aa19.98■□□□□ 0.79
VARS-219ENST00000461328 FAM9BQ8IZU0 186 aa19.98■□□□□ 0.79
VARS-219ENST00000461328 LMNB1P20700 586 aa19.97■□□□□ 0.79
VARS-219ENST00000461328 PRPF40BQ6NWY9 871 aaKnown RBP19.97■□□□□ 0.79
VARS-219ENST00000461328 GIGYF2Q6Y7W6 1299 aaKnown RBP19.97■□□□□ 0.79
VARS-219ENST00000461328 NPR1P16066 1061 aa19.96■□□□□ 0.79
VARS-219ENST00000461328 HDGFL1Q5TGJ6 251 aa19.96■□□□□ 0.79
VARS-219ENST00000461328 UBN2Q6ZU65 1347 aa19.96■□□□□ 0.79
VARS-219ENST00000461328 NFKBIEO00221 500 aa19.95■□□□□ 0.78
VARS-219ENST00000461328 HOXB7P09629 217 aa19.95■□□□□ 0.78
VARS-219ENST00000461328 AIMP1Q12904 312 aaKnown RBP19.95■□□□□ 0.78
VARS-219ENST00000461328 COPS6Q7L5N1 327 aa19.95■□□□□ 0.78
VARS-219ENST00000461328 NUTM1Q86Y26 1132 aa19.95■□□□□ 0.78
VARS-219ENST00000461328 DDX21Q9NR30 783 aaKnown RBP eCLIP19.95■□□□□ 0.78
VARS-219ENST00000461328 ABCC12Q96J65 1359 aa19.95■□□□□ 0.78
VARS-219ENST00000461328 IBTKQ9P2D0 1353 aaPredicted RBP19.95■□□□□ 0.78
VARS-219ENST00000461328 SBF1O95248 1867 aa19.94■□□□□ 0.78
VARS-219ENST00000461328 KLRG2A4D1S0 409 aaPredicted RBP19.94■□□□□ 0.78
VARS-219ENST00000461328 KIF3CO14782 793 aa19.94■□□□□ 0.78
VARS-219ENST00000461328 ZNF853P0CG23 659 aa19.94■□□□□ 0.78
VARS-219ENST00000461328 ERFEQ4G0M1 354 aa19.94■□□□□ 0.78
VARS-219ENST00000461328 SUSD4Q5VX71 490 aa19.94■□□□□ 0.78
VARS-219ENST00000461328 DUSP27Q5VZP5 1158 aa19.94■□□□□ 0.78
VARS-219ENST00000461328 ZNF34Q8IZ26 560 aa19.94■□□□□ 0.78
VARS-219ENST00000461328 XAGE3Q8WTP9 111 aa19.94■□□□□ 0.78
VARS-219ENST00000461328 CHPF2Q9P2E5 772 aa19.94■□□□□ 0.78
VARS-219ENST00000461328 SALL2Q9Y467 1007 aaPredicted RBP19.94■□□□□ 0.78
VARS-219ENST00000461328 CACNA1SQ13698 1873 aa19.93■□□□□ 0.78
VARS-219ENST00000461328 CCDC27Q2M243 656 aa19.93■□□□□ 0.78
VARS-219ENST00000461328 SOGA3Q5TF21 947 aa19.93■□□□□ 0.78
VARS-219ENST00000461328 KDM2BQ8NHM5 1336 aa19.93■□□□□ 0.78
VARS-219ENST00000461328 SLX4Q8IY92 1834 aa19.92■□□□□ 0.78
VARS-219ENST00000461328 PRELPP51888 382 aa19.92■□□□□ 0.78
VARS-219ENST00000461328 PARP10Q53GL7 1025 aa19.92■□□□□ 0.78
VARS-219ENST00000461328 PPP1R42Q7Z4L9 355 aa19.92■□□□□ 0.78
VARS-219ENST00000461328 WWC1Q8IX03 1113 aa19.92■□□□□ 0.78
VARS-219ENST00000461328 NMRK2Q9NPI5 230 aa19.92■□□□□ 0.78
VARS-219ENST00000461328 DBF4Q9UBU7 674 aaPredicted RBP19.92■□□□□ 0.78
VARS-219ENST00000461328 ZC3H4Q9UPT8 1303 aaKnown RBP19.92■□□□□ 0.78
VARS-219ENST00000461328 ARFGEF2Q9Y6D5 1785 aa19.92■□□□□ 0.78
VARS-219ENST00000461328 TNRC6CQ9HCJ0 1690 aaKnown RBP19.91■□□□□ 0.78
VARS-219ENST00000461328 HSP90AB3PQ58FF7 597 aa19.91■□□□□ 0.78
VARS-219ENST00000461328 TAOK3Q9H2K8 898 aa19.91■□□□□ 0.78
VARS-219ENST00000461328 ELL2O00472 640 aaPredicted RBP19.9■□□□□ 0.78
VARS-219ENST00000461328 NTSR2O95665 410 aa19.9■□□□□ 0.78
VARS-219ENST00000461328 ALDH1B1P30837 517 aa19.9■□□□□ 0.78
VARS-219ENST00000461328 FER1L6Q2WGJ9 1857 aa19.89■□□□□ 0.77
VARS-219ENST00000461328 RIC1Q4ADV7 1423 aa19.89■□□□□ 0.77
VARS-219ENST00000461328 CCDC93Q567U6 631 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms