RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 SERPINB2P05120 415 aa20.95■□□□□ 0.94
SHANK1-205ENST00000461154 HNRNPUQ00839 825 aaKnown RBP eCLIP20.95■□□□□ 0.94
SHANK1-205ENST00000461154 PDIA6Q15084 440 aa20.95■□□□□ 0.94
SHANK1-205ENST00000461154 TWISTNBQ3B726 338 aaPredicted RBP20.95■□□□□ 0.94
SHANK1-205ENST00000461154 CLEC4GQ6UXB4 293 aa20.95■□□□□ 0.94
SHANK1-205ENST00000461154 KIF6Q6ZMV9 814 aa20.95■□□□□ 0.94
SHANK1-205ENST00000461154 ZNF652Q9Y2D9 606 aa20.95■□□□□ 0.94
SHANK1-205ENST00000461154 GRIN3BO60391 1043 aa20.94■□□□□ 0.94
SHANK1-205ENST00000461154 CCDC30Q5VVM6 783 aa20.94■□□□□ 0.94
SHANK1-205ENST00000461154 TBC1D9BQ66K14 1250 aa20.94■□□□□ 0.94
SHANK1-205ENST00000461154 BICDL1Q6ZP65 573 aa20.94■□□□□ 0.94
SHANK1-205ENST00000461154 TSPYL6Q8N831 410 aa20.94■□□□□ 0.94
SHANK1-205ENST00000461154 CHPF2Q9P2E5 772 aa20.94■□□□□ 0.94
SHANK1-205ENST00000461154 EXOSC9Q06265 439 aaKnown RBP20.93■□□□□ 0.94
SHANK1-205ENST00000461154 HYPKQ9NX55 129 aa20.93■□□□□ 0.94
SHANK1-205ENST00000461154 ERVV-1B6SEH8 477 aa20.92■□□□□ 0.94
SHANK1-205ENST00000461154 ANXA1P04083 346 aa20.92■□□□□ 0.94
SHANK1-205ENST00000461154 PROSER3Q2NL68 480 aa20.92■□□□□ 0.94
SHANK1-205ENST00000461154 SETDB2Q96T68 719 aa20.92■□□□□ 0.94
SHANK1-205ENST00000461154 YBX3P16989 372 aaKnown RBP eCLIP20.91■□□□□ 0.94
SHANK1-205ENST00000461154 SLFN5Q08AF3 891 aa20.91■□□□□ 0.94
SHANK1-205ENST00000461154 MAP3K15Q6ZN16 1313 aa20.91■□□□□ 0.94
SHANK1-205ENST00000461154 LRP10Q7Z4F1 713 aa20.91■□□□□ 0.94
SHANK1-205ENST00000461154 STK31Q9BXU1 1019 aa20.91■□□□□ 0.94
SHANK1-205ENST00000461154 A0A0G2JLW4 131 aa20.9■□□□□ 0.94
SHANK1-205ENST00000461154 DPEP1P16444 411 aa20.9■□□□□ 0.94
SHANK1-205ENST00000461154 TTLL7Q6ZT98 887 aa20.9■□□□□ 0.94
SHANK1-205ENST00000461154 PXDNLA1KZ92 1463 aa20.89■□□□□ 0.94
SHANK1-205ENST00000461154 CARMIL3Q8ND23 1372 aa20.89■□□□□ 0.93
SHANK1-205ENST00000461154 YY1P25490 414 aa20.89■□□□□ 0.93
SHANK1-205ENST00000461154 COPS6Q7L5N1 327 aa20.89■□□□□ 0.93
SHANK1-205ENST00000461154 XAGE3Q8WTP9 111 aa20.89■□□□□ 0.93
SHANK1-205ENST00000461154 KIF13BQ9NQT8 1826 aa20.89■□□□□ 0.93
SHANK1-205ENST00000461154 AIMP1Q12904 312 aaKnown RBP20.88■□□□□ 0.93
SHANK1-205ENST00000461154 VAMP4O75379 141 aa20.87■□□□□ 0.93
SHANK1-205ENST00000461154 CDCA7LQ96GN5 454 aa20.87■□□□□ 0.93
SHANK1-205ENST00000461154 ZBTB3Q9H5J0 574 aa20.87■□□□□ 0.93
SHANK1-205ENST00000461154 NUP98P52948 1817 aa20.87■□□□□ 0.93
SHANK1-205ENST00000461154 NPHP1O15259 732 aa20.86■□□□□ 0.93
SHANK1-205ENST00000461154 HLFQ16534 295 aa20.86■□□□□ 0.93
SHANK1-205ENST00000461154 PIM2Q9P1W9 311 aa20.86■□□□□ 0.93
SHANK1-205ENST00000461154 WWC3Q9ULE0 1092 aa20.86■□□□□ 0.93
SHANK1-205ENST00000461154 KCNA3P22001 575 aa20.85■□□□□ 0.93
SHANK1-205ENST00000461154 GIGYF2Q6Y7W6 1299 aaKnown RBP20.85■□□□□ 0.93
SHANK1-205ENST00000461154 TRMT2AQ8IZ69 625 aaKnown RBP20.85■□□□□ 0.93
SHANK1-205ENST00000461154 CNBD1Q8NA66 436 aa20.85■□□□□ 0.93
SHANK1-205ENST00000461154 PDZRN3Q9UPQ7 1066 aa20.85■□□□□ 0.93
SHANK1-205ENST00000461154 NIP7Q9Y221 180 aaKnown RBP eCLIP20.85■□□□□ 0.93
SHANK1-205ENST00000461154 CACNA1FO60840 1977 aa20.85■□□□□ 0.93
SHANK1-205ENST00000461154 ZBED9Q6R2W3 1325 aa20.84■□□□□ 0.93
SHANK1-205ENST00000461154 HSP90AB3PQ58FF7 597 aa20.84■□□□□ 0.93
SHANK1-205ENST00000461154 PRR5LQ6MZQ0 368 aa20.84■□□□□ 0.93
SHANK1-205ENST00000461154 ANKRD13DQ6ZTN6 518 aa20.84■□□□□ 0.93
SHANK1-205ENST00000461154 NBPF5PQ86XG9 351 aaPredicted RBP20.84■□□□□ 0.93
SHANK1-205ENST00000461154 BRIP1Q9BX63 1249 aa20.84■□□□□ 0.93
SHANK1-205ENST00000461154 BCS1LQ9Y276 419 aa20.84■□□□□ 0.93
SHANK1-205ENST00000461154 ATP10DQ9P241 1426 aa20.84■□□□□ 0.93
SHANK1-205ENST00000461154 NRXN2Q9P2S2 1712 aa20.84■□□□□ 0.93
SHANK1-205ENST00000461154 AFDNP55196 1824 aaKnown RBP20.83■□□□□ 0.93
SHANK1-205ENST00000461154 DDX58O95786 925 aaKnown RBP20.83■□□□□ 0.93
SHANK1-205ENST00000461154 CHRNA5P30532 468 aa20.83■□□□□ 0.93
SHANK1-205ENST00000461154 PDE6BP35913 854 aa20.83■□□□□ 0.93
SHANK1-205ENST00000461154 ST5P78524 1137 aa20.83■□□□□ 0.93
SHANK1-205ENST00000461154 TPTE2Q6XPS3 522 aa20.83■□□□□ 0.93
SHANK1-205ENST00000461154 PLBD2Q8NHP8 589 aa20.83■□□□□ 0.93
SHANK1-205ENST00000461154 H0YIN7 160 aa20.82■□□□□ 0.92
SHANK1-205ENST00000461154 SLC4A2P04920 1241 aa20.82■□□□□ 0.92
SHANK1-205ENST00000461154 ZNF428Q96B54 188 aa20.82■□□□□ 0.92
SHANK1-205ENST00000461154 PHAXQ9H814 394 aaKnown RBP20.82■□□□□ 0.92
SHANK1-205ENST00000461154 TCERG1O14776 1098 aaKnown RBP20.81■□□□□ 0.92
SHANK1-205ENST00000461154 CT47B1P0C2W7 299 aaPredicted RBP20.81■□□□□ 0.92
SHANK1-205ENST00000461154 DALRD3Q5D0E6 543 aaKnown RBP20.81■□□□□ 0.92
SHANK1-205ENST00000461154 C2CD5Q86YS7 1000 aa20.81■□□□□ 0.92
SHANK1-205ENST00000461154 ANKRD36CQ5JPF3 1778 aa20.8■□□□□ 0.92
SHANK1-205ENST00000461154 N4BP2Q86UW6 1770 aaPredicted RBP20.8■□□□□ 0.92
SHANK1-205ENST00000461154 RIC3Q7Z5B4 369 aa20.8■□□□□ 0.92
SHANK1-205ENST00000461154 KIAA1551Q9HCM1 1747 aa20.8■□□□□ 0.92
SHANK1-205ENST00000461154 TCIRG1Q13488 830 aa20.79■□□□□ 0.92
SHANK1-205ENST00000461154 PARP10Q53GL7 1025 aa20.79■□□□□ 0.92
SHANK1-205ENST00000461154 ZNF34Q8IZ26 560 aa20.79■□□□□ 0.92
SHANK1-205ENST00000461154 CCDC24Q8N4L8 307 aa20.79■□□□□ 0.92
SHANK1-205ENST00000461154 NYXQ9GZU5 481 aa20.79■□□□□ 0.92
SHANK1-205ENST00000461154 ARFGEF2Q9Y6D5 1785 aa20.79■□□□□ 0.92
SHANK1-205ENST00000461154 GPTP24298 496 aa20.78■□□□□ 0.92
SHANK1-205ENST00000461154 GTF2E1P29083 439 aaPredicted RBP20.78■□□□□ 0.92
SHANK1-205ENST00000461154 IBTKQ9P2D0 1353 aaPredicted RBP20.77■□□□□ 0.92
SHANK1-205ENST00000461154 FAM177BA6PVY3 158 aa20.77■□□□□ 0.92
SHANK1-205ENST00000461154 FLIIQ13045 1269 aa20.77■□□□□ 0.92
SHANK1-205ENST00000461154 PPP1R42Q7Z4L9 355 aa20.77■□□□□ 0.92
SHANK1-205ENST00000461154 CHD4Q14839 1912 aa20.76■□□□□ 0.91
SHANK1-205ENST00000461154 TTLL6Q8N841 843 aa20.76■□□□□ 0.91
SHANK1-205ENST00000461154 UBN2Q6ZU65 1347 aa20.76■□□□□ 0.91
SHANK1-205ENST00000461154 FKBP5Q13451 457 aaPredicted RBP20.75■□□□□ 0.91
SHANK1-205ENST00000461154 ALDH1L2Q3SY69 923 aa20.75■□□□□ 0.91
SHANK1-205ENST00000461154 KSR2Q6VAB6 950 aa20.75■□□□□ 0.91
SHANK1-205ENST00000461154 ARHGAP27Q6ZUM4 889 aa20.75■□□□□ 0.91
SHANK1-205ENST00000461154 G2E3Q7L622 706 aa20.75■□□□□ 0.91
SHANK1-205ENST00000461154 ZNF622Q969S3 477 aaKnown RBP eCLIP20.75■□□□□ 0.91
SHANK1-205ENST00000461154 MAP3K2Q9Y2U5 619 aa20.74■□□□□ 0.91
SHANK1-205ENST00000461154 PI4KAP2A4QPH2 592 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms