RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 BCL2L12Q9HB09 334 aa14.27□□□□□ -0.13
APTX-209ENST00000460940 CHPF2Q9P2E5 772 aa14.27□□□□□ -0.13
APTX-209ENST00000460940 RBM19Q9Y4C8 960 aaKnown RBP14.27□□□□□ -0.13
APTX-209ENST00000460940 ELL2O00472 640 aaPredicted RBP14.26□□□□□ -0.13
APTX-209ENST00000460940 HNRNPUQ00839 825 aaKnown RBP eCLIP14.26□□□□□ -0.13
APTX-209ENST00000460940 TSPYL6Q8N831 410 aa14.26□□□□□ -0.13
APTX-209ENST00000460940 NECTIN2Q92692 538 aa14.26□□□□□ -0.13
APTX-209ENST00000460940 HYPKQ9NX55 129 aa14.26□□□□□ -0.13
APTX-209ENST00000460940 ERVV-1B6SEH8 477 aa14.25□□□□□ -0.13
APTX-209ENST00000460940 SLFN5Q08AF3 891 aa14.25□□□□□ -0.13
APTX-209ENST00000460940 PROSER3Q2NL68 480 aa14.25□□□□□ -0.13
APTX-209ENST00000460940 MAP3K15Q6ZN16 1313 aa14.25□□□□□ -0.13
APTX-209ENST00000460940 EXOSC9Q06265 439 aaKnown RBP14.25□□□□□ -0.13
APTX-209ENST00000460940 PARP3Q9Y6F1 533 aa14.25□□□□□ -0.13
APTX-209ENST00000460940 TM4SF1P30408 202 aa14.24□□□□□ -0.13
APTX-209ENST00000460940 STK31Q9BXU1 1019 aa14.24□□□□□ -0.13
APTX-209ENST00000460940 ANXA1P04083 346 aa14.23□□□□□ -0.13
APTX-209ENST00000460940 NFIXQ14938 502 aa14.23□□□□□ -0.13
APTX-209ENST00000460940 TTLL7Q6ZT98 887 aa14.23□□□□□ -0.13
APTX-209ENST00000460940 ZBED9Q6R2W3 1325 aa14.23□□□□□ -0.13
APTX-209ENST00000460940 CARMIL3Q8ND23 1372 aa14.23□□□□□ -0.13
APTX-209ENST00000460940 ATP10DQ9P241 1426 aa14.23□□□□□ -0.13
APTX-209ENST00000460940 POLRMTO00411 1230 aaKnown RBP14.23□□□□□ -0.13
APTX-209ENST00000460940 DDR1Q08345 913 aa14.23□□□□□ -0.13
APTX-209ENST00000460940 TRMT2AQ8IZ69 625 aaKnown RBP14.23□□□□□ -0.13
APTX-209ENST00000460940 XAGE3Q8WTP9 111 aa14.23□□□□□ -0.13
APTX-209ENST00000460940 VAMP4O75379 141 aa14.22□□□□□ -0.13
APTX-209ENST00000460940 TBC1D9BQ66K14 1250 aa14.22□□□□□ -0.13
APTX-209ENST00000460940 C10orf71Q711Q0 1435 aa14.22□□□□□ -0.13
APTX-209ENST00000460940 COPS6Q7L5N1 327 aa14.22□□□□□ -0.13
APTX-209ENST00000460940 CD2APQ9Y5K6 639 aa14.22□□□□□ -0.13
APTX-209ENST00000460940 CDCA7LQ96GN5 454 aa14.21□□□□□ -0.13
APTX-209ENST00000460940 SETDB2Q96T68 719 aa14.21□□□□□ -0.13
APTX-209ENST00000460940 FHDC1Q9C0D6 1143 aaPredicted RBP14.21□□□□□ -0.13
APTX-209ENST00000460940 NRXN2Q9P2S2 1712 aa14.21□□□□□ -0.13
APTX-209ENST00000460940 EIF5BO60841 1220 aaKnown RBP14.21□□□□□ -0.14
APTX-209ENST00000460940 CT47B1P0C2W7 299 aaPredicted RBP14.21□□□□□ -0.14
APTX-209ENST00000460940 GIGYF2Q6Y7W6 1299 aaKnown RBP14.21□□□□□ -0.14
APTX-209ENST00000460940 ZBTB3Q9H5J0 574 aa14.21□□□□□ -0.14
APTX-209ENST00000460940 AIMP1Q12904 312 aaKnown RBP14.2□□□□□ -0.14
APTX-209ENST00000460940 HLFQ16534 295 aa14.2□□□□□ -0.14
APTX-209ENST00000460940 HSP90AB3PQ58FF7 597 aa14.2□□□□□ -0.14
APTX-209ENST00000460940 PLBD2Q8NHP8 589 aa14.2□□□□□ -0.14
APTX-209ENST00000460940 ZNF428Q96B54 188 aa14.2□□□□□ -0.14
APTX-209ENST00000460940 IBTKQ9P2D0 1353 aaPredicted RBP14.19□□□□□ -0.14
APTX-209ENST00000460940 BICDL1Q6ZP65 573 aa14.19□□□□□ -0.14
APTX-209ENST00000460940 SYT17Q9BSW7 474 aa14.19□□□□□ -0.14
APTX-209ENST00000460940 NIP7Q9Y221 180 aaKnown RBP eCLIP14.19□□□□□ -0.14
APTX-209ENST00000460940 KIF13BQ9NQT8 1826 aa14.19□□□□□ -0.14
APTX-209ENST00000460940 DDX58O95786 925 aaKnown RBP14.18□□□□□ -0.14
APTX-209ENST00000460940 SERPINB2P05120 415 aa14.18□□□□□ -0.14
APTX-209ENST00000460940 ANKRD13DQ6ZTN6 518 aa14.18□□□□□ -0.14
APTX-209ENST00000460940 KLHL34Q8N239 644 aa14.18□□□□□ -0.14
APTX-209ENST00000460940 NUP98P52948 1817 aa14.18□□□□□ -0.14
APTX-209ENST00000460940 CACNA1FO60840 1977 aa14.17□□□□□ -0.14
APTX-209ENST00000460940 SLC4A2P04920 1241 aa14.17□□□□□ -0.14
APTX-209ENST00000460940 PARP10Q53GL7 1025 aa14.17□□□□□ -0.14
APTX-209ENST00000460940 PHAXQ9H814 394 aaKnown RBP14.17□□□□□ -0.14
APTX-209ENST00000460940 AFDNP55196 1824 aaKnown RBP14.17□□□□□ -0.14
APTX-209ENST00000460940 ANKRD36CQ5JPF3 1778 aa14.17□□□□□ -0.14
APTX-209ENST00000460940 NBPF5PQ86XG9 351 aaPredicted RBP14.16□□□□□ -0.14
APTX-209ENST00000460940 ZNF34Q8IZ26 560 aa14.16□□□□□ -0.14
APTX-209ENST00000460940 CNBD1Q8NA66 436 aa14.16□□□□□ -0.14
APTX-209ENST00000460940 NYXQ9GZU5 481 aa14.16□□□□□ -0.14
APTX-209ENST00000460940 TGFB2P61812 414 aa14.16□□□□□ -0.14
APTX-209ENST00000460940 ARFGEF2Q9Y6D5 1785 aa14.16□□□□□ -0.14
APTX-209ENST00000460940 RNF123Q5XPI4 1314 aa14.15□□□□□ -0.14
APTX-209ENST00000460940 TCERG1O14776 1098 aaKnown RBP14.15□□□□□ -0.14
APTX-209ENST00000460940 ST5P78524 1137 aa14.15□□□□□ -0.14
APTX-209ENST00000460940 FLIIQ13045 1269 aa14.15□□□□□ -0.14
APTX-209ENST00000460940 TCIRG1Q13488 830 aa14.15□□□□□ -0.14
APTX-209ENST00000460940 PRR5LQ6MZQ0 368 aa14.15□□□□□ -0.14
APTX-209ENST00000460940 RIC3Q7Z5B4 369 aa14.15□□□□□ -0.14
APTX-209ENST00000460940 PXDNLA1KZ92 1463 aa14.15□□□□□ -0.14
APTX-209ENST00000460940 UBN2Q6ZU65 1347 aa14.15□□□□□ -0.14
APTX-209ENST00000460940 NPHP1O15259 732 aa14.14□□□□□ -0.15
APTX-209ENST00000460940 GPTP24298 496 aa14.14□□□□□ -0.15
APTX-209ENST00000460940 ALDH1L2Q3SY69 923 aa14.14□□□□□ -0.15
APTX-209ENST00000460940 TPTE2Q6XPS3 522 aa14.14□□□□□ -0.15
APTX-209ENST00000460940 KSR2Q6VAB6 950 aa14.14□□□□□ -0.15
APTX-209ENST00000460940 PPP1R42Q7Z4L9 355 aa14.14□□□□□ -0.15
APTX-209ENST00000460940 NLGN2Q8NFZ4 835 aa14.14□□□□□ -0.15
APTX-209ENST00000460940 PDZRN3Q9UPQ7 1066 aa14.14□□□□□ -0.15
APTX-209ENST00000460940 RIC1Q4ADV7 1423 aa14.13□□□□□ -0.15
APTX-209ENST00000460940 ADCY9O60503 1353 aa14.13□□□□□ -0.15
APTX-209ENST00000460940 TRIM28Q13263 835 aaKnown RBP14.13□□□□□ -0.15
APTX-209ENST00000460940 G2E3Q7L622 706 aa14.13□□□□□ -0.15
APTX-209ENST00000460940 BRIP1Q9BX63 1249 aa14.13□□□□□ -0.15
APTX-209ENST00000460940 KIAA1551Q9HCM1 1747 aa14.13□□□□□ -0.15
APTX-209ENST00000460940 FKBP5Q13451 457 aaPredicted RBP14.12□□□□□ -0.15
APTX-209ENST00000460940 NLRP10Q86W26 655 aa14.12□□□□□ -0.15
APTX-209ENST00000460940 ISCA1Q9BUE6 129 aa14.12□□□□□ -0.15
APTX-209ENST00000460940 PI4KAP2A4QPH2 592 aa14.12□□□□□ -0.15
APTX-209ENST00000460940 NTSR2O95665 410 aa14.12□□□□□ -0.15
APTX-209ENST00000460940 PDE6BP35913 854 aa14.12□□□□□ -0.15
APTX-209ENST00000460940 PI4KAP1Q8N8J0 262 aa14.12□□□□□ -0.15
APTX-209ENST00000460940 METTL22Q9BUU2 404 aaPredicted RBP14.12□□□□□ -0.15
APTX-209ENST00000460940 UTP14AQ9BVJ6 771 aaKnown RBP14.12□□□□□ -0.15
APTX-209ENST00000460940 MAP3K2Q9Y2U5 619 aa14.12□□□□□ -0.15
APTX-209ENST00000460940 GTF2E1P29083 439 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms