RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 HECW2Q9P2P5 1572 aa7.79□□□□□ -1.16
ATPAF1-203ENST00000460928 ABCA5Q8WWZ7 1642 aa7.78□□□□□ -1.16
ATPAF1-203ENST00000460928 A6NJR5 290 aa7.78□□□□□ -1.16
ATPAF1-203ENST00000460928 HOXB4P17483 251 aaPredicted RBP7.78□□□□□ -1.16
ATPAF1-203ENST00000460928 WWC1Q8IX03 1113 aa7.78□□□□□ -1.16
ATPAF1-203ENST00000460928 SERTAD1Q9UHV2 236 aa7.78□□□□□ -1.16
ATPAF1-203ENST00000460928 GGA1Q9UJY5 639 aa7.78□□□□□ -1.16
ATPAF1-203ENST00000460928 NOD1Q9Y239 953 aa7.78□□□□□ -1.16
ATPAF1-203ENST00000460928 SNAPC4Q5SXM2 1469 aa7.78□□□□□ -1.16
ATPAF1-203ENST00000460928 PBRM1Q86U86 1689 aa7.78□□□□□ -1.16
ATPAF1-203ENST00000460928 A0A1W2PNR3 127 aa7.77□□□□□ -1.17
ATPAF1-203ENST00000460928 BACH1O14867 736 aa7.77□□□□□ -1.17
ATPAF1-203ENST00000460928 ATXN7O15265 892 aaPredicted RBP7.77□□□□□ -1.17
ATPAF1-203ENST00000460928 TATP17735 454 aaPredicted RBP7.77□□□□□ -1.17
ATPAF1-203ENST00000460928 CLUAP1Q96AJ1 413 aa7.77□□□□□ -1.17
ATPAF1-203ENST00000460928 AIDAQ96BJ3 306 aa7.77□□□□□ -1.17
ATPAF1-203ENST00000460928 SPOCK3Q9BQ16 436 aa7.77□□□□□ -1.17
ATPAF1-203ENST00000460928 AVENQ9NQS1 362 aaPredicted RBP7.77□□□□□ -1.17
ATPAF1-203ENST00000460928 USP3Q9Y6I4 520 aa7.77□□□□□ -1.17
ATPAF1-203ENST00000460928 EPXP11678 715 aa7.76□□□□□ -1.17
ATPAF1-203ENST00000460928 SKIP12755 728 aa7.76□□□□□ -1.17
ATPAF1-203ENST00000460928 TNP2Q05952 138 aa7.76□□□□□ -1.17
ATPAF1-203ENST00000460928 SAMD5Q5TGI4 173 aa7.76□□□□□ -1.17
ATPAF1-203ENST00000460928 SCHIP1Q9P0W5 487 aaPredicted RBP7.76□□□□□ -1.17
ATPAF1-203ENST00000460928 GRIN2BQ13224 1484 aa7.75□□□□□ -1.17
ATPAF1-203ENST00000460928 PROCP04070 461 aa7.75□□□□□ -1.17
ATPAF1-203ENST00000460928 FAM157BP0CG42 384 aa7.75□□□□□ -1.17
ATPAF1-203ENST00000460928 MAPTP10636 758 aaKnown RBP7.75□□□□□ -1.17
ATPAF1-203ENST00000460928 GTF2IP78347 998 aa7.75□□□□□ -1.17
ATPAF1-203ENST00000460928 ARSJQ5FYB0 599 aaPredicted RBP7.75□□□□□ -1.17
ATPAF1-203ENST00000460928 LINC00114Q6XXX2 140 aa7.75□□□□□ -1.17
ATPAF1-203ENST00000460928 ZIC5Q96T25 663 aa7.75□□□□□ -1.17
ATPAF1-203ENST00000460928 HCN2Q9UL51 889 aa7.75□□□□□ -1.17
ATPAF1-203ENST00000460928 PIK3R2O00459 728 aa7.74□□□□□ -1.17
ATPAF1-203ENST00000460928 ADAM23O75077 832 aa7.74□□□□□ -1.17
ATPAF1-203ENST00000460928 NCOA4Q13772 614 aa7.74□□□□□ -1.17
ATPAF1-203ENST00000460928 ILDR2Q71H61 639 aa7.74□□□□□ -1.17
ATPAF1-203ENST00000460928 RRAGCQ9HB90 399 aa7.74□□□□□ -1.17
ATPAF1-203ENST00000460928 ZNF358Q9NW07 568 aa7.74□□□□□ -1.17
ATPAF1-203ENST00000460928 CABP1Q9NZU7 370 aa7.74□□□□□ -1.17
ATPAF1-203ENST00000460928 KIF27Q86VH2 1401 aa7.73□□□□□ -1.17
ATPAF1-203ENST00000460928 USP17L5A8MUK1 530 aa7.73□□□□□ -1.17
ATPAF1-203ENST00000460928 COL8A1P27658 744 aa7.73□□□□□ -1.17
ATPAF1-203ENST00000460928 ADH6P28332 368 aa7.73□□□□□ -1.17
ATPAF1-203ENST00000460928 EPHA4P54764 986 aa7.73□□□□□ -1.17
ATPAF1-203ENST00000460928 LAMC2Q13753 1193 aa7.73□□□□□ -1.17
ATPAF1-203ENST00000460928 POM121Q96HA1 1249 aa7.73□□□□□ -1.17
ATPAF1-203ENST00000460928 BTBD6Q96KE9 485 aa7.73□□□□□ -1.17
ATPAF1-203ENST00000460928 DCDC2BA2VCK2 349 aa7.72□□□□□ -1.17
ATPAF1-203ENST00000460928 KRBA1A5PL33 1030 aa7.72□□□□□ -1.17
ATPAF1-203ENST00000460928 NEURL1BA8MQ27 555 aa7.72□□□□□ -1.17
ATPAF1-203ENST00000460928 GNB5O14775 395 aa7.72□□□□□ -1.17
ATPAF1-203ENST00000460928 EFSO43281 561 aa7.72□□□□□ -1.17
ATPAF1-203ENST00000460928 RAD21O60216 631 aa7.72□□□□□ -1.17
ATPAF1-203ENST00000460928 AMPD1P23109 780 aa7.72□□□□□ -1.17
ATPAF1-203ENST00000460928 DGKGP49619 791 aa7.72□□□□□ -1.17
ATPAF1-203ENST00000460928 TEAD4Q15561 434 aa7.72□□□□□ -1.17
ATPAF1-203ENST00000460928 PLEKHM2Q8IWE5 1019 aa7.72□□□□□ -1.17
ATPAF1-203ENST00000460928 CHMP7Q8WUX9 453 aaPredicted RBP7.72□□□□□ -1.17
ATPAF1-203ENST00000460928 GPC6Q9Y625 555 aaPredicted RBP7.72□□□□□ -1.17
ATPAF1-203ENST00000460928 ADAMTS12P58397 1594 aa7.71□□□□□ -1.17
ATPAF1-203ENST00000460928 KIF13AQ9H1H9 1805 aa7.71□□□□□ -1.17
ATPAF1-203ENST00000460928 KHNYNO15037 678 aaKnown RBP7.71□□□□□ -1.18
ATPAF1-203ENST00000460928 CD33P20138 364 aa7.71□□□□□ -1.18
ATPAF1-203ENST00000460928 ZNF468Q5VIY5 522 aaPredicted RBP7.71□□□□□ -1.18
ATPAF1-203ENST00000460928 TRIM50Q86XT4 487 aa7.71□□□□□ -1.18
ATPAF1-203ENST00000460928 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.71□□□□□ -1.18
ATPAF1-203ENST00000460928 ZDHHC1Q8WTX9 485 aa7.71□□□□□ -1.18
ATPAF1-203ENST00000460928 KLF15Q9UIH9 416 aa7.71□□□□□ -1.18
ATPAF1-203ENST00000460928 EML1O00423 815 aa7.7□□□□□ -1.18
ATPAF1-203ENST00000460928 TXLNAP40222 546 aa7.7□□□□□ -1.18
ATPAF1-203ENST00000460928 PSME1Q06323 249 aa7.7□□□□□ -1.18
ATPAF1-203ENST00000460928 ADAMTS19Q8TE59 1207 aa7.7□□□□□ -1.18
ATPAF1-203ENST00000460928 L3MBTL2Q969R5 705 aa7.7□□□□□ -1.18
ATPAF1-203ENST00000460928 GJA3Q9Y6H8 435 aa7.7□□□□□ -1.18
ATPAF1-203ENST00000460928 DISP3Q9P2K9 1392 aa7.7□□□□□ -1.18
ATPAF1-203ENST00000460928 SYNJ2O15056 1496 aa7.69□□□□□ -1.18
ATPAF1-203ENST00000460928 MAGI1Q96QZ7 1491 aaPredicted RBP7.69□□□□□ -1.18
ATPAF1-203ENST00000460928 ERICH3Q5RHP9 1530 aa7.69□□□□□ -1.18
ATPAF1-203ENST00000460928 NOS2P35228 1153 aa7.69□□□□□ -1.18
ATPAF1-203ENST00000460928 BICDL1Q6ZP65 573 aa7.69□□□□□ -1.18
ATPAF1-203ENST00000460928 CHSY3Q70JA7 882 aa7.69□□□□□ -1.18
ATPAF1-203ENST00000460928 FCHSD1Q86WN1 690 aa7.69□□□□□ -1.18
ATPAF1-203ENST00000460928 SLC9A9Q8IVB4 645 aa7.69□□□□□ -1.18
ATPAF1-203ENST00000460928 DEPDC4Q8N2C3 294 aa7.69□□□□□ -1.18
ATPAF1-203ENST00000460928 PODXL2Q9NZ53 605 aa7.69□□□□□ -1.18
ATPAF1-203ENST00000460928 MARK1Q9P0L2 795 aa7.69□□□□□ -1.18
ATPAF1-203ENST00000460928 PARP3Q9Y6F1 533 aa7.69□□□□□ -1.18
ATPAF1-203ENST00000460928 CLASP1Q7Z460 1538 aa7.68□□□□□ -1.18
ATPAF1-203ENST00000460928 ATP1A2P50993 1020 aa7.68□□□□□ -1.18
ATPAF1-203ENST00000460928 POTEAQ6S8J7 498 aa7.68□□□□□ -1.18
ATPAF1-203ENST00000460928 C7orf43Q8WVR3 580 aa7.68□□□□□ -1.18
ATPAF1-203ENST00000460928 SUV39H2Q9H5I1 410 aa7.68□□□□□ -1.18
ATPAF1-203ENST00000460928 NOP53Q9NZM5 478 aaKnown RBP7.68□□□□□ -1.18
ATPAF1-203ENST00000460928 CARMIL1Q5VZK9 1371 aa7.68□□□□□ -1.18
ATPAF1-203ENST00000460928 FHAD1B1AJZ9 1412 aa7.68□□□□□ -1.18
ATPAF1-203ENST00000460928 GRIN2AQ12879 1464 aa7.68□□□□□ -1.18
ATPAF1-203ENST00000460928 CEP170Q5SW79 1584 aa7.67□□□□□ -1.18
ATPAF1-203ENST00000460928 USP17L3A6NCW0 530 aa7.67□□□□□ -1.18
ATPAF1-203ENST00000460928 USP17L4A6NCW7 530 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms