RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 BMP4P12644 408 aa4.78□□□□□ -1.64
PTPN22-203ENST00000460620 GDF10P55107 478 aa4.78□□□□□ -1.64
PTPN22-203ENST00000460620 EFHC2Q5JST6 749 aa4.78□□□□□ -1.64
PTPN22-203ENST00000460620 GPAMQ9HCL2 828 aa4.78□□□□□ -1.64
PTPN22-203ENST00000460620 COG6Q9Y2V7 657 aa4.78□□□□□ -1.64
PTPN22-203ENST00000460620 THBS1P07996 1170 aa4.77□□□□□ -1.65
PTPN22-203ENST00000460620 ARAFP10398 606 aa4.77□□□□□ -1.65
PTPN22-203ENST00000460620 MSX1P28360 303 aa4.77□□□□□ -1.65
PTPN22-203ENST00000460620 SCNN1DP51172 638 aa4.77□□□□□ -1.65
PTPN22-203ENST00000460620 MBTPS1Q14703 1052 aa4.77□□□□□ -1.65
PTPN22-203ENST00000460620 C1orf216Q8TAB5 229 aa4.77□□□□□ -1.65
PTPN22-203ENST00000460620 CRISPLD1Q9H336 500 aa4.77□□□□□ -1.65
PTPN22-203ENST00000460620 SMTNP53814 917 aa4.76□□□□□ -1.65
PTPN22-203ENST00000460620 COL9A3Q14050 684 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-203ENST00000460620 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-203ENST00000460620 NFATC2IPQ8NCF5 419 aa4.76□□□□□ -1.65
PTPN22-203ENST00000460620 ATXN7L1Q9ULK2 861 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-203ENST00000460620 TRIM28Q13263 835 aaKnown RBP4.76□□□□□ -1.65
PTPN22-203ENST00000460620 UBAP2LQ14157 1087 aaKnown RBP4.76□□□□□ -1.65
PTPN22-203ENST00000460620 EML3Q32P44 896 aa4.76□□□□□ -1.65
PTPN22-203ENST00000460620 FIGNL1Q6PIW4 674 aa4.76□□□□□ -1.65
PTPN22-203ENST00000460620 TBC1D9Q6ZT07 1266 aa4.76□□□□□ -1.65
PTPN22-203ENST00000460620 SLC4A9Q96Q91 983 aa4.76□□□□□ -1.65
PTPN22-203ENST00000460620 NIFKQ9BYG3 293 aaKnown RBP4.76□□□□□ -1.65
PTPN22-203ENST00000460620 RAD21O60216 631 aa4.75□□□□□ -1.65
PTPN22-203ENST00000460620 STAU1O95793 577 aaKnown RBP4.75□□□□□ -1.65
PTPN22-203ENST00000460620 PRKCSHP14314 528 aaPredicted RBP4.75□□□□□ -1.65
PTPN22-203ENST00000460620 PLA2G4AP47712 749 aa4.75□□□□□ -1.65
PTPN22-203ENST00000460620 NRG1Q02297 640 aaPredicted RBP4.75□□□□□ -1.65
PTPN22-203ENST00000460620 FLIIQ13045 1269 aa4.75□□□□□ -1.65
PTPN22-203ENST00000460620 PKN1Q16512 942 aa4.75□□□□□ -1.65
PTPN22-203ENST00000460620 ALG2Q9H553 416 aa4.75□□□□□ -1.65
PTPN22-203ENST00000460620 RUBCNLQ9H714 662 aa4.75□□□□□ -1.65
PTPN22-203ENST00000460620 CDK2AP1O14519 115 aa4.74□□□□□ -1.65
PTPN22-203ENST00000460620 MTFR1Q15390 333 aa4.74□□□□□ -1.65
PTPN22-203ENST00000460620 NLRP8Q86W28 1048 aa4.74□□□□□ -1.65
PTPN22-203ENST00000460620 NDFIP2Q9NV92 336 aa4.74□□□□□ -1.65
PTPN22-203ENST00000460620 NOD1Q9Y239 953 aa4.74□□□□□ -1.65
PTPN22-203ENST00000460620 TMEM229AB2RXF0 380 aa4.73□□□□□ -1.65
PTPN22-203ENST00000460620 BACH1O14867 736 aa4.73□□□□□ -1.65
PTPN22-203ENST00000460620 SKIP12755 728 aa4.73□□□□□ -1.65
PTPN22-203ENST00000460620 NBPF1Q3BBV0 1214 aa4.73□□□□□ -1.65
PTPN22-203ENST00000460620 SSBP4Q9BWG4 385 aaPredicted RBP4.73□□□□□ -1.65
PTPN22-203ENST00000460620 PCDHGA11Q9Y5H2 935 aa4.73□□□□□ -1.65
PTPN22-203ENST00000460620 A6NJY4 79 aa4.73□□□□□ -1.65
PTPN22-203ENST00000460620 PIK3CDO00329 1044 aa4.73□□□□□ -1.65
PTPN22-203ENST00000460620 FGFR3P22607 806 aa4.73□□□□□ -1.65
PTPN22-203ENST00000460620 ZDHHC3Q9NYG2 299 aa4.73□□□□□ -1.65
PTPN22-203ENST00000460620 SERTAD1Q9UHV2 236 aa4.73□□□□□ -1.65
PTPN22-203ENST00000460620 PCDHGC4Q9Y5F7 938 aa4.73□□□□□ -1.65
PTPN22-203ENST00000460620 BNIP3LO60238 219 aa4.72□□□□□ -1.65
PTPN22-203ENST00000460620 TATP17735 454 aaPredicted RBP4.72□□□□□ -1.65
PTPN22-203ENST00000460620 ATP4AP20648 1035 aa4.72□□□□□ -1.65
PTPN22-203ENST00000460620 ZNF295-AS1Q8N0V1 137 aa4.72□□□□□ -1.65
PTPN22-203ENST00000460620 ABHD17AQ96GS6 310 aa4.72□□□□□ -1.65
PTPN22-203ENST00000460620 DNAAF2Q9NVR5 837 aaKnown RBP4.72□□□□□ -1.65
PTPN22-203ENST00000460620 IQSEC3Q9UPP2 1182 aaPredicted RBP4.72□□□□□ -1.65
PTPN22-203ENST00000460620 UBTFP17480 764 aaKnown RBP4.71□□□□□ -1.66
PTPN22-203ENST00000460620 GTF2IP78347 998 aa4.71□□□□□ -1.66
PTPN22-203ENST00000460620 TRIM50Q86XT4 487 aa4.71□□□□□ -1.66
PTPN22-203ENST00000460620 AIDAQ96BJ3 306 aa4.71□□□□□ -1.66
PTPN22-203ENST00000460620 ZCCHC2Q9C0B9 1178 aaKnown RBP4.71□□□□□ -1.66
PTPN22-203ENST00000460620 USP17L5A8MUK1 530 aa4.7□□□□□ -1.66
PTPN22-203ENST00000460620 ATXN7O15265 892 aaPredicted RBP4.7□□□□□ -1.66
PTPN22-203ENST00000460620 NCOA4Q13772 614 aa4.7□□□□□ -1.66
PTPN22-203ENST00000460620 ZNF124Q15973 351 aa4.7□□□□□ -1.66
PTPN22-203ENST00000460620 FAM182BQ5T319 152 aa4.7□□□□□ -1.66
PTPN22-203ENST00000460620 POM121Q96HA1 1249 aa4.7□□□□□ -1.66
PTPN22-203ENST00000460620 CABP1Q9NZU7 370 aa4.7□□□□□ -1.66
PTPN22-203ENST00000460620 A0A1W2PNR3 127 aa4.7□□□□□ -1.66
PTPN22-203ENST00000460620 C2CD2LO14523 706 aa4.7□□□□□ -1.66
PTPN22-203ENST00000460620 JUNBP17275 347 aaPredicted RBP4.7□□□□□ -1.66
PTPN22-203ENST00000460620 CTBSQ01459 385 aa4.7□□□□□ -1.66
PTPN22-203ENST00000460620 PSME1Q06323 249 aa4.7□□□□□ -1.66
PTPN22-203ENST00000460620 ARSJQ5FYB0 599 aaPredicted RBP4.7□□□□□ -1.66
PTPN22-203ENST00000460620 SAMD5Q5TGI4 173 aa4.7□□□□□ -1.66
PTPN22-203ENST00000460620 PLEKHM2Q8IWE5 1019 aa4.7□□□□□ -1.66
PTPN22-203ENST00000460620 ZNF358Q9NW07 568 aa4.7□□□□□ -1.66
PTPN22-203ENST00000460620 SCHIP1Q9P0W5 487 aaPredicted RBP4.7□□□□□ -1.66
PTPN22-203ENST00000460620 FAM157BP0CG42 384 aa4.69□□□□□ -1.66
PTPN22-203ENST00000460620 ATP1A2P50993 1020 aa4.69□□□□□ -1.66
PTPN22-203ENST00000460620 TNP2Q05952 138 aa4.69□□□□□ -1.66
PTPN22-203ENST00000460620 ZIC5Q96T25 663 aa4.69□□□□□ -1.66
PTPN22-203ENST00000460620 GPC6Q9Y625 555 aaPredicted RBP4.69□□□□□ -1.66
PTPN22-203ENST00000460620 GJA3Q9Y6H8 435 aa4.69□□□□□ -1.66
PTPN22-203ENST00000460620 NEURL1BA8MQ27 555 aa4.68□□□□□ -1.66
PTPN22-203ENST00000460620 TEAD4Q15561 434 aa4.68□□□□□ -1.66
PTPN22-203ENST00000460620 ZNF648Q5T619 568 aaPredicted RBP4.68□□□□□ -1.66
PTPN22-203ENST00000460620 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.68□□□□□ -1.66
PTPN22-203ENST00000460620 USP3Q9Y6I4 520 aa4.68□□□□□ -1.66
PTPN22-203ENST00000460620 WNT11O96014 354 aa4.68□□□□□ -1.66
PTPN22-203ENST00000460620 MAPTP10636 758 aaKnown RBP4.68□□□□□ -1.66
PTPN22-203ENST00000460620 FSTP19883 344 aa4.68□□□□□ -1.66
PTPN22-203ENST00000460620 SPINK2P20155 84 aa4.68□□□□□ -1.66
PTPN22-203ENST00000460620 EPHA4P54764 986 aa4.68□□□□□ -1.66
PTPN22-203ENST00000460620 USP17L3A6NCW0 530 aa4.67□□□□□ -1.66
PTPN22-203ENST00000460620 USP17L4A6NCW7 530 aa4.67□□□□□ -1.66
PTPN22-203ENST00000460620 POM121CA8CG34 1229 aa4.67□□□□□ -1.66
PTPN22-203ENST00000460620 M0R2N6 131 aa4.67□□□□□ -1.66
PTPN22-203ENST00000460620 KHNYNO15037 678 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms