RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 GRM8O00222 908 aa21.94■■□□□ 1.1
HPS3-202ENST00000460120 PTH1RQ03431 593 aa21.94■■□□□ 1.1
HPS3-202ENST00000460120 USP54Q70EL1 1684 aa21.94■■□□□ 1.1
HPS3-202ENST00000460120 TMEM63CQ9P1W3 806 aa21.93■■□□□ 1.1
HPS3-202ENST00000460120 CCDC9Q9Y3X0 531 aaKnown RBP21.93■■□□□ 1.1
HPS3-202ENST00000460120 GLRX3O76003 335 aaKnown RBP21.93■■□□□ 1.1
HPS3-202ENST00000460120 CASTP20810 708 aaKnown RBP21.93■■□□□ 1.1
HPS3-202ENST00000460120 CUL4AQ13619 759 aa21.93■■□□□ 1.1
HPS3-202ENST00000460120 HYPKQ9NX55 129 aa21.93■■□□□ 1.1
HPS3-202ENST00000460120 AK2P54819 239 aa21.93■■□□□ 1.1
HPS3-202ENST00000460120 PRPF40BQ6NWY9 871 aaKnown RBP21.93■■□□□ 1.1
HPS3-202ENST00000460120 ZNF790Q6PG37 636 aa21.93■■□□□ 1.1
HPS3-202ENST00000460120 XAGE3Q8WTP9 111 aa21.93■■□□□ 1.1
HPS3-202ENST00000460120 KAZALD1Q96I82 304 aa21.93■■□□□ 1.1
HPS3-202ENST00000460120 MYD88Q99836 296 aa21.93■■□□□ 1.1
HPS3-202ENST00000460120 RBSNQ9H1K0 784 aa21.93■■□□□ 1.1
HPS3-202ENST00000460120 ECHDC1Q9NTX5 307 aa21.93■■□□□ 1.1
HPS3-202ENST00000460120 BRD1O95696 1058 aa21.92■■□□□ 1.1
HPS3-202ENST00000460120 CHMP4AQ9BY43 222 aa21.92■■□□□ 1.1
HPS3-202ENST00000460120 KDM3BQ7LBC6 1761 aa21.92■■□□□ 1.1
HPS3-202ENST00000460120 COPS6Q7L5N1 327 aa21.92■■□□□ 1.1
HPS3-202ENST00000460120 ESPNB1AK53 854 aa21.91■■□□□ 1.1
HPS3-202ENST00000460120 ALDH1L1O75891 902 aa21.91■■□□□ 1.1
HPS3-202ENST00000460120 DDX58O95786 925 aaKnown RBP21.91■■□□□ 1.1
HPS3-202ENST00000460120 G3BP1Q13283 466 aaKnown RBP eCLIP21.91■■□□□ 1.1
HPS3-202ENST00000460120 PDIA6Q15084 440 aa21.91■■□□□ 1.1
HPS3-202ENST00000460120 ANP32BQ92688 251 aaKnown RBP21.91■■□□□ 1.1
HPS3-202ENST00000460120 BOLA2Q9H3K6 86 aa21.91■■□□□ 1.1
HPS3-202ENST00000460120 CACNA1FO60840 1977 aa21.91■■□□□ 1.1
HPS3-202ENST00000460120 IGKV5-2P06315 115 aa21.91■■□□□ 1.1
HPS3-202ENST00000460120 RNF214Q8ND24 703 aa21.91■■□□□ 1.1
HPS3-202ENST00000460120 LINS1Q8NG48 757 aa21.91■■□□□ 1.1
HPS3-202ENST00000460120 NAP1L5Q96NT1 182 aaPredicted RBP21.91■■□□□ 1.1
HPS3-202ENST00000460120 DDX21Q9NR30 783 aaKnown RBP eCLIP21.91■■□□□ 1.1
HPS3-202ENST00000460120 KCNJ4P48050 445 aa21.9■■□□□ 1.1
HPS3-202ENST00000460120 ADCK5Q3MIX3 580 aa21.9■■□□□ 1.1
HPS3-202ENST00000460120 EAF2Q96CJ1 260 aaPredicted RBP21.9■■□□□ 1.1
HPS3-202ENST00000460120 ZNF496Q96IT1 587 aaPredicted RBP21.9■■□□□ 1.1
HPS3-202ENST00000460120 FAM227BQ96M60 508 aa21.9■■□□□ 1.1
HPS3-202ENST00000460120 TUBGCP6Q96RT7 1819 aa21.9■■□□□ 1.1
HPS3-202ENST00000460120 SASH1O94885 1247 aa21.9■■□□□ 1.1
HPS3-202ENST00000460120 TATP17735 454 aaPredicted RBP21.89■■□□□ 1.1
HPS3-202ENST00000460120 JAKMIP1Q96N16 626 aaKnown RBP21.89■■□□□ 1.1
HPS3-202ENST00000460120 USP16Q9Y5T5 823 aa21.89■■□□□ 1.1
HPS3-202ENST00000460120 NDUFB9Q9Y6M9 179 aa21.89■■□□□ 1.1
HPS3-202ENST00000460120 GADD45BO75293 160 aaPredicted RBP21.89■■□□□ 1.09
HPS3-202ENST00000460120 LARGE1O95461 756 aa21.89■■□□□ 1.09
HPS3-202ENST00000460120 ATF3P18847 181 aa21.89■■□□□ 1.09
HPS3-202ENST00000460120 EPHA10Q5JZY3 1008 aa21.89■■□□□ 1.09
HPS3-202ENST00000460120 GPATCH3Q96I76 525 aa21.89■■□□□ 1.09
HPS3-202ENST00000460120 ATP5J2-PTCD1G3V325 749 aa21.88■■□□□ 1.09
HPS3-202ENST00000460120 PTCD1O75127 700 aaKnown RBP21.88■■□□□ 1.09
HPS3-202ENST00000460120 RUFY3Q7L099 469 aa21.88■■□□□ 1.09
HPS3-202ENST00000460120 EDC3Q96F86 508 aaKnown RBP21.88■■□□□ 1.09
HPS3-202ENST00000460120 LMO7Q8WWI1 1683 aa21.88■■□□□ 1.09
HPS3-202ENST00000460120 C19orf44Q9H6X5 657 aa21.88■■□□□ 1.09
HPS3-202ENST00000460120 SLC52A2Q9HAB3 445 aa21.88■■□□□ 1.09
HPS3-202ENST00000460120 ZNF445P59923 1031 aa21.87■■□□□ 1.09
HPS3-202ENST00000460120 TTC41PQ6P2S7 1318 aa21.87■■□□□ 1.09
HPS3-202ENST00000460120 NPHP3Q7Z494 1330 aa21.87■■□□□ 1.09
HPS3-202ENST00000460120 MTX1Q13505 466 aa21.87■■□□□ 1.09
HPS3-202ENST00000460120 TCEANC2Q96MN5 208 aa21.87■■□□□ 1.09
HPS3-202ENST00000460120 C1orf167Q5SNV9 1468 aa21.87■■□□□ 1.09
HPS3-202ENST00000460120 PHKG2P15735 406 aa21.86■■□□□ 1.09
HPS3-202ENST00000460120 NEXNQ0ZGT2 675 aa21.86■■□□□ 1.09
HPS3-202ENST00000460120 COL9A3Q14050 684 aaPredicted RBP21.86■■□□□ 1.09
HPS3-202ENST00000460120 CCDC83Q8IWF9 413 aa21.86■■□□□ 1.09
HPS3-202ENST00000460120 INTS4Q96HW7 963 aaKnown RBP21.86■■□□□ 1.09
HPS3-202ENST00000460120 TTC5Q8N0Z6 440 aa21.86■■□□□ 1.09
HPS3-202ENST00000460120 NMIQ13287 307 aaPredicted RBP21.85■■□□□ 1.09
HPS3-202ENST00000460120 ERC1Q8IUD2 1116 aa21.85■■□□□ 1.09
HPS3-202ENST00000460120 NCAPD2Q15021 1401 aa21.85■■□□□ 1.09
HPS3-202ENST00000460120 FSD1Q9BTV5 496 aa21.85■■□□□ 1.09
HPS3-202ENST00000460120 NEURL1BA8MQ27 555 aa21.84■■□□□ 1.09
HPS3-202ENST00000460120 CLCN1P35523 988 aa21.84■■□□□ 1.09
HPS3-202ENST00000460120 RUFY2Q8WXA3 655 aa21.84■■□□□ 1.09
HPS3-202ENST00000460120 HEG1Q9ULI3 1381 aa21.84■■□□□ 1.09
HPS3-202ENST00000460120 KDM6AO15550 1401 aaPredicted RBP21.84■■□□□ 1.09
HPS3-202ENST00000460120 SLIT3O75094 1523 aa21.84■■□□□ 1.09
HPS3-202ENST00000460120 N4BP2Q86UW6 1770 aaPredicted RBP21.84■■□□□ 1.09
HPS3-202ENST00000460120 RGPD5Q99666 1765 aa21.84■■□□□ 1.09
HPS3-202ENST00000460120 CCDC173Q0VFZ6 552 aa21.84■■□□□ 1.09
HPS3-202ENST00000460120 USP48Q86UV5 1035 aa21.84■■□□□ 1.09
HPS3-202ENST00000460120 NECAB1Q8N987 351 aa21.84■■□□□ 1.09
HPS3-202ENST00000460120 TTC14Q96N46 770 aa21.84■■□□□ 1.09
HPS3-202ENST00000460120 CNPY2Q9Y2B0 182 aa21.84■■□□□ 1.09
HPS3-202ENST00000460120 LARP1Q6PKG0 1096 aaKnown RBP21.83■■□□□ 1.09
HPS3-202ENST00000460120 UBE3BQ7Z3V4 1068 aa21.83■■□□□ 1.09
HPS3-202ENST00000460120 PDRG1Q9NUG6 133 aa21.83■■□□□ 1.09
HPS3-202ENST00000460120 LIMCH1Q9UPQ0 1083 aa21.83■■□□□ 1.09
HPS3-202ENST00000460120 CHGBP05060 677 aa21.83■■□□□ 1.08
HPS3-202ENST00000460120 SMC3Q9UQE7 1217 aa21.83■■□□□ 1.08
HPS3-202ENST00000460120 CHMP3Q9Y3E7 222 aa21.83■■□□□ 1.08
HPS3-202ENST00000460120 GCKRQ14397 625 aa21.82■■□□□ 1.08
HPS3-202ENST00000460120 EVI5LQ96CN4 794 aa21.82■■□□□ 1.08
HPS3-202ENST00000460120 RPAP1Q9BWH6 1393 aaPredicted RBP21.82■■□□□ 1.08
HPS3-202ENST00000460120 WDR33Q9C0J8 1336 aaKnown RBP21.82■■□□□ 1.08
HPS3-202ENST00000460120 A0A0D9SFI3 127 aa21.82■■□□□ 1.08
HPS3-202ENST00000460120 CYP27B1O15528 508 aa21.82■■□□□ 1.08
HPS3-202ENST00000460120 RBM8AQ9Y5S9 174 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms