RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 TNRC6CQ9HCJ0 1690 aaKnown RBP13.15□□□□□ -0.31
HDLBP-228ENST00000459788 CACNA1SQ13698 1873 aa13.14□□□□□ -0.31
HDLBP-228ENST00000459788 PRAMEF22A3QJZ6 481 aa13.14□□□□□ -0.31
HDLBP-228ENST00000459788 IBTKQ9P2D0 1353 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-228ENST00000459788 SOGA3Q5TF21 947 aa13.13□□□□□ -0.31
HDLBP-228ENST00000459788 STYK1Q6J9G0 422 aa13.13□□□□□ -0.31
HDLBP-228ENST00000459788 TPTE2Q6XPS3 522 aa13.13□□□□□ -0.31
HDLBP-228ENST00000459788 BICDL1Q6ZP65 573 aa13.13□□□□□ -0.31
HDLBP-228ENST00000459788 MIS18AQ9NYP9 233 aa13.13□□□□□ -0.31
HDLBP-228ENST00000459788 TSPYL4Q9UJ04 414 aa13.13□□□□□ -0.31
HDLBP-228ENST00000459788 WWC3Q9ULE0 1092 aa13.13□□□□□ -0.31
HDLBP-228ENST00000459788 RIC1Q4ADV7 1423 aa13.13□□□□□ -0.31
HDLBP-228ENST00000459788 ANKRD36CQ5JPF3 1778 aa13.12□□□□□ -0.31
HDLBP-228ENST00000459788 SLX4Q8IY92 1834 aa13.12□□□□□ -0.31
HDLBP-228ENST00000459788 KLRG2A4D1S0 409 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-228ENST00000459788 NBPF5PQ86XG9 351 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-228ENST00000459788 CNKSR1Q969H4 720 aa13.12□□□□□ -0.31
HDLBP-228ENST00000459788 TIAM2Q8IVF5 1701 aa13.11□□□□□ -0.31
HDLBP-228ENST00000459788 CHL1O00533 1208 aa13.11□□□□□ -0.31
HDLBP-228ENST00000459788 NPHP1O15259 732 aa13.11□□□□□ -0.31
HDLBP-228ENST00000459788 HOXB7P09629 217 aa13.11□□□□□ -0.31
HDLBP-228ENST00000459788 C9orf131Q5VYM1 1079 aa13.11□□□□□ -0.31
HDLBP-228ENST00000459788 KIF6Q6ZMV9 814 aa13.11□□□□□ -0.31
HDLBP-228ENST00000459788 MASTLQ96GX5 879 aa13.11□□□□□ -0.31
HDLBP-228ENST00000459788 NYXQ9GZU5 481 aa13.11□□□□□ -0.31
HDLBP-228ENST00000459788 NIP7Q9Y221 180 aaKnown RBP eCLIP13.11□□□□□ -0.31
HDLBP-228ENST00000459788 MAP3K15Q6ZN16 1313 aa13.11□□□□□ -0.31
HDLBP-228ENST00000459788 KDM2BQ8NHM5 1336 aa13.11□□□□□ -0.31
HDLBP-228ENST00000459788 LTBP3Q9NS15 1303 aa13.11□□□□□ -0.31
HDLBP-228ENST00000459788 SRGNP10124 158 aa13.1□□□□□ -0.31
HDLBP-228ENST00000459788 LMNB1P20700 586 aa13.1□□□□□ -0.31
HDLBP-228ENST00000459788 THUMPD2Q9BTF0 503 aaKnown RBP13.1□□□□□ -0.31
HDLBP-228ENST00000459788 ADAMTS8Q9UP79 889 aa13.1□□□□□ -0.31
HDLBP-228ENST00000459788 NPR1P16066 1061 aa13.09□□□□□ -0.31
HDLBP-228ENST00000459788 CALD1Q05682 793 aaKnown RBP13.09□□□□□ -0.31
HDLBP-228ENST00000459788 RNF123Q5XPI4 1314 aa13.09□□□□□ -0.31
HDLBP-228ENST00000459788 KIF3CO14782 793 aa13.08□□□□□ -0.32
HDLBP-228ENST00000459788 PIP4K2AP48426 406 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-228ENST00000459788 GIGYF2Q6Y7W6 1299 aaKnown RBP13.08□□□□□ -0.32
HDLBP-228ENST00000459788 ZNF622Q969S3 477 aaKnown RBP eCLIP13.08□□□□□ -0.322e-14■□□□□ 10.6
HDLBP-228ENST00000459788 CHMP4AQ9BY43 222 aa13.08□□□□□ -0.32
HDLBP-228ENST00000459788 RNF181Q9P0P0 153 aa13.08□□□□□ -0.32
HDLBP-228ENST00000459788 TRIM35Q9UPQ4 493 aa13.08□□□□□ -0.32
HDLBP-228ENST00000459788 CACNA1FO60840 1977 aa13.07□□□□□ -0.32
HDLBP-228ENST00000459788 TOMM70O94826 608 aa13.07□□□□□ -0.32
HDLBP-228ENST00000459788 HLFQ16534 295 aa13.07□□□□□ -0.32
HDLBP-228ENST00000459788 NCBP3Q53F19 620 aaKnown RBP13.07□□□□□ -0.32
HDLBP-228ENST00000459788 PARP10Q53GL7 1025 aa13.07□□□□□ -0.32
HDLBP-228ENST00000459788 LRP10Q7Z4F1 713 aa13.07□□□□□ -0.32
HDLBP-228ENST00000459788 CFAP44Q96MT7 982 aa13.07□□□□□ -0.32
HDLBP-228ENST00000459788 RRP7AQ9Y3A4 280 aaKnown RBP13.07□□□□□ -0.32
HDLBP-228ENST00000459788 ALDH1B1P30837 517 aa13.06□□□□□ -0.32
HDLBP-228ENST00000459788 PDIA6Q15084 440 aa13.06□□□□□ -0.32
HDLBP-228ENST00000459788 GRIPAP1Q4V328 841 aa13.06□□□□□ -0.32
HDLBP-228ENST00000459788 HSP90AB3PQ58FF7 597 aa13.06□□□□□ -0.32
HDLBP-228ENST00000459788 CCDC146Q8IYE0 955 aa13.06□□□□□ -0.32
HDLBP-228ENST00000459788 ZNF34Q8IZ26 560 aa13.06□□□□□ -0.32
HDLBP-228ENST00000459788 DDX21Q9NR30 783 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDLBP-228ENST00000459788 WDR90Q96KV7 1748 aa13.05□□□□□ -0.32
HDLBP-228ENST00000459788 SENP3-EIF4A1A0A087X0R7 540 aa13.05□□□□□ -0.32
HDLBP-228ENST00000459788 NFKBIEO00221 500 aa13.05□□□□□ -0.32
HDLBP-228ENST00000459788 MYL6BP14649 208 aa13.05□□□□□ -0.32
HDLBP-228ENST00000459788 GTF2E1P29083 439 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-228ENST00000459788 CRY2Q49AN0 593 aa13.05□□□□□ -0.32
HDLBP-228ENST00000459788 PRPF40BQ6NWY9 871 aaKnown RBP13.05□□□□□ -0.32
HDLBP-228ENST00000459788 PPP1R42Q7Z4L9 355 aa13.05□□□□□ -0.32
HDLBP-228ENST00000459788 RBM46Q8TBY0 533 aaKnown RBP13.05□□□□□ -0.32
HDLBP-228ENST00000459788 ZNF526Q8TF50 670 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-228ENST00000459788 ZNF853P0CG23 659 aa13.04□□□□□ -0.32
HDLBP-228ENST00000459788 HSPA6P17066 643 aa13.04□□□□□ -0.32
HDLBP-228ENST00000459788 GNAI1P63096 354 aa13.04□□□□□ -0.32
HDLBP-228ENST00000459788 NEUROD2Q15784 382 aa13.04□□□□□ -0.32
HDLBP-228ENST00000459788 CC2D2BQ6DHV5 1058 aa13.04□□□□□ -0.32
HDLBP-228ENST00000459788 TTLL7Q6ZT98 887 aa13.04□□□□□ -0.32
HDLBP-228ENST00000459788 C7orf43Q8WVR3 580 aa13.04□□□□□ -0.32
HDLBP-228ENST00000459788 TAOK3Q9H2K8 898 aa13.04□□□□□ -0.32
HDLBP-228ENST00000459788 IFT57Q9NWB7 429 aa13.04□□□□□ -0.32
HDLBP-228ENST00000459788 SCN4AP35499 1836 aa13.04□□□□□ -0.32
HDLBP-228ENST00000459788 CEP350Q5VT06 3117 aa13.04□□□□□ -0.32
HDLBP-228ENST00000459788 GLTPD2A6NH11 291 aa13.03□□□□□ -0.32
HDLBP-228ENST00000459788 C21orf2O43822 256 aa13.03□□□□□ -0.32
HDLBP-228ENST00000459788 HOXA10P31260 410 aaPredicted RBP13.03□□□□□ -0.32
HDLBP-228ENST00000459788 FSTL1Q12841 308 aa13.03□□□□□ -0.32
HDLBP-228ENST00000459788 CCDC93Q567U6 631 aa13.03□□□□□ -0.32
HDLBP-228ENST00000459788 RTKN2Q8IZC4 609 aa13.03□□□□□ -0.32
HDLBP-228ENST00000459788 LAMB2P55268 1798 aa13.02□□□□□ -0.32
HDLBP-228ENST00000459788 ZNF316A6NFI3 1004 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-228ENST00000459788 EIF2S2P20042 333 aaKnown RBP13.02□□□□□ -0.33
HDLBP-228ENST00000459788 RASSF7Q02833 373 aa13.02□□□□□ -0.33
HDLBP-228ENST00000459788 CCDC27Q2M243 656 aa13.02□□□□□ -0.33
HDLBP-228ENST00000459788 SLC10A5Q5PT55 438 aa13.02□□□□□ -0.33
HDLBP-228ENST00000459788 DPY19L2Q6NUT2 758 aa13.02□□□□□ -0.33
HDLBP-228ENST00000459788 NGEFQ8N5V2 710 aa13.02□□□□□ -0.33
HDLBP-228ENST00000459788 ZBTB3Q9H5J0 574 aa13.02□□□□□ -0.33
HDLBP-228ENST00000459788 DBF4Q9UBU7 674 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-228ENST00000459788 APAF1O14727 1248 aa13.01□□□□□ -0.33
HDLBP-228ENST00000459788 NTSR2O95665 410 aa13.01□□□□□ -0.33
HDLBP-228ENST00000459788 C16orf71Q8IYS4 520 aaPredicted RBP13.01□□□□□ -0.33
HDLBP-228ENST00000459788 CCDC24Q8N4L8 307 aa13.01□□□□□ -0.33
HDLBP-228ENST00000459788 CRAMP1Q96RY5 1269 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 770.1 ms