RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 PPP1R3GB7ZBB8 358 aa7.91□□□□□ -1.14
VPS8-214ENST00000458721 PDIA6Q15084 440 aa7.91□□□□□ -1.14
VPS8-214ENST00000458721 NBPF6Q5VWK0 638 aa7.91□□□□□ -1.14
VPS8-214ENST00000458721 NBPF4Q96M43 638 aa7.91□□□□□ -1.14
VPS8-214ENST00000458721 GPBP1L1Q9HC44 474 aaPredicted RBP7.91□□□□□ -1.14
VPS8-214ENST00000458721 ARFGEF1Q9Y6D6 1849 aa7.91□□□□□ -1.14
VPS8-214ENST00000458721 C4AP0C0L4 1744 aa7.9□□□□□ -1.14
VPS8-214ENST00000458721 ST20-MTHFSA0A0A6YYL1 179 aa7.9□□□□□ -1.14
VPS8-214ENST00000458721 FYB1O15117 783 aa7.9□□□□□ -1.14
VPS8-214ENST00000458721 HSPA6P17066 643 aa7.9□□□□□ -1.14
VPS8-214ENST00000458721 TMF1P82094 1093 aa7.9□□□□□ -1.14
VPS8-214ENST00000458721 AK7Q96M32 723 aa7.9□□□□□ -1.14
VPS8-214ENST00000458721 IGSF1Q8N6C5 1336 aa7.89□□□□□ -1.15
VPS8-214ENST00000458721 KCNQ4P56696 695 aa7.89□□□□□ -1.15
VPS8-214ENST00000458721 RRS1Q15050 365 aaKnown RBP7.89□□□□□ -1.15
VPS8-214ENST00000458721 DDX12PQ92771 950 aa7.89□□□□□ -1.15
VPS8-214ENST00000458721 ARIH1Q9Y4X5 557 aaPredicted RBP7.89□□□□□ -1.15
VPS8-214ENST00000458721 TNRC6CQ9HCJ0 1690 aaKnown RBP7.89□□□□□ -1.15
VPS8-214ENST00000458721 C10orf71Q711Q0 1435 aa7.88□□□□□ -1.15
VPS8-214ENST00000458721 KDRP35968 1356 aa7.88□□□□□ -1.15
VPS8-214ENST00000458721 BHMG1C9JSJ3 638 aaPredicted RBP7.88□□□□□ -1.15
VPS8-214ENST00000458721 CYP27B1O15528 508 aa7.88□□□□□ -1.15
VPS8-214ENST00000458721 MSL1Q68DK7 614 aa7.88□□□□□ -1.15
VPS8-214ENST00000458721 KCTD12Q96CX2 325 aaKnown RBP7.88□□□□□ -1.15
VPS8-214ENST00000458721 NBPF3Q9H094 633 aa7.88□□□□□ -1.15
VPS8-214ENST00000458721 SPG7Q9UQ90 795 aa7.88□□□□□ -1.15
VPS8-214ENST00000458721 WDR90Q96KV7 1748 aa7.88□□□□□ -1.15
VPS8-214ENST00000458721 PXDNLA1KZ92 1463 aa7.87□□□□□ -1.15
VPS8-214ENST00000458721 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.87□□□□□ -1.15
VPS8-214ENST00000458721 COL9A1P20849 921 aa7.87□□□□□ -1.15
VPS8-214ENST00000458721 MPRIPQ6WCQ1 1025 aa7.87□□□□□ -1.15
VPS8-214ENST00000458721 MRPL50Q8N5N7 158 aaKnown RBP7.87□□□□□ -1.15
VPS8-214ENST00000458721 GGNBP2Q9H3C7 697 aa7.87□□□□□ -1.15
VPS8-214ENST00000458721 N4BP2Q86UW6 1770 aaPredicted RBP7.87□□□□□ -1.15
VPS8-214ENST00000458721 WASHC2AQ641Q2 1341 aa7.86□□□□□ -1.15
VPS8-214ENST00000458721 LOC102724428A0A0B4J2F2 783 aa7.86□□□□□ -1.15
VPS8-214ENST00000458721 GOLGA8CPA6NN73 597 aa7.86□□□□□ -1.15
VPS8-214ENST00000458721 SIK1P57059 783 aa7.86□□□□□ -1.15
VPS8-214ENST00000458721 TGFB2P61812 414 aa7.86□□□□□ -1.15
VPS8-214ENST00000458721 HSP90AB2PQ58FF8 381 aa7.86□□□□□ -1.15
VPS8-214ENST00000458721 C6orf132Q5T0Z8 1188 aa7.86□□□□□ -1.15
VPS8-214ENST00000458721 USHBP1Q8N6Y0 703 aa7.86□□□□□ -1.15
VPS8-214ENST00000458721 TMOD3Q9NYL9 352 aa7.86□□□□□ -1.15
VPS8-214ENST00000458721 APLP1P51693 650 aa7.85□□□□□ -1.15
VPS8-214ENST00000458721 NBR1Q14596 966 aa7.85□□□□□ -1.15
VPS8-214ENST00000458721 PIGBQ92521 554 aa7.85□□□□□ -1.15
VPS8-214ENST00000458721 TSHZ2Q9NRE2 1034 aa7.85□□□□□ -1.15
VPS8-214ENST00000458721 DLEC1Q9Y238 1755 aa7.84□□□□□ -1.15
VPS8-214ENST00000458721 CNTNAP4Q9C0A0 1308 aa7.84□□□□□ -1.15
VPS8-214ENST00000458721 GNPATO15228 680 aa7.84□□□□□ -1.15
VPS8-214ENST00000458721 HSP90AB1P08238 724 aaKnown RBP7.84□□□□□ -1.15
VPS8-214ENST00000458721 PROX2Q3B8N5 592 aa7.84□□□□□ -1.15
VPS8-214ENST00000458721 IFNL2Q8IZJ0 200 aa7.84□□□□□ -1.15
VPS8-214ENST00000458721 NLGN1Q8N2Q7 840 aa7.84□□□□□ -1.15
VPS8-214ENST00000458721 LINC00116Q8NCU8 138 aa7.84□□□□□ -1.15
VPS8-214ENST00000458721 RABGEF1Q9UJ41 708 aa7.84□□□□□ -1.15
VPS8-214ENST00000458721 SCN11AQ9UI33 1791 aa7.84□□□□□ -1.15
VPS8-214ENST00000458721 TJP1Q07157 1748 aa7.83□□□□□ -1.16
VPS8-214ENST00000458721 ZC3H4Q9UPT8 1303 aaKnown RBP7.83□□□□□ -1.16
VPS8-214ENST00000458721 ERVV-2B6SEH9 535 aa7.83□□□□□ -1.16
VPS8-214ENST00000458721 TOMM70O94826 608 aa7.83□□□□□ -1.16
VPS8-214ENST00000458721 PHKG2P15735 406 aa7.83□□□□□ -1.16
VPS8-214ENST00000458721 FBLN1P23142 703 aa7.83□□□□□ -1.16
VPS8-214ENST00000458721 RC3H1Q5TC82 1133 aaKnown RBP7.83□□□□□ -1.16
VPS8-214ENST00000458721 RTCBQ9Y3I0 505 aaKnown RBP7.83□□□□□ -1.16
VPS8-214ENST00000458721 EMILIN1Q9Y6C2 1016 aa7.83□□□□□ -1.16
VPS8-214ENST00000458721 ADAMTS7Q9UKP4 1686 aa7.83□□□□□ -1.16
VPS8-214ENST00000458721 MAP3K7O43318 606 aa7.82□□□□□ -1.16
VPS8-214ENST00000458721 MMP10P09238 476 aa7.82□□□□□ -1.16
VPS8-214ENST00000458721 ATP6V1AP38606 617 aa7.82□□□□□ -1.16
VPS8-214ENST00000458721 AMIGO3Q86WK7 504 aa7.82□□□□□ -1.16
VPS8-214ENST00000458721 WNT2BQ93097 391 aa7.82□□□□□ -1.16
VPS8-214ENST00000458721 DCAF5Q96JK2 942 aa7.82□□□□□ -1.16
VPS8-214ENST00000458721 CCDC87Q9NVE4 849 aa7.82□□□□□ -1.16
VPS8-214ENST00000458721 NRXN2Q9P2S2 1712 aa7.82□□□□□ -1.16
VPS8-214ENST00000458721 TIMELESSQ9UNS1 1208 aa7.82□□□□□ -1.16
VPS8-214ENST00000458721 MYH14Q7Z406 1995 aaKnown RBP7.82□□□□□ -1.16
VPS8-214ENST00000458721 VIRMAQ69YN4 1812 aaKnown RBP7.82□□□□□ -1.16
VPS8-214ENST00000458721 ITPK1Q13572 414 aa7.81□□□□□ -1.16
VPS8-214ENST00000458721 THSD4Q6ZMP0 1018 aa7.81□□□□□ -1.16
VPS8-214ENST00000458721 EYA1Q99502 592 aa7.81□□□□□ -1.16
VPS8-214ENST00000458721 SBF1O95248 1867 aa7.81□□□□□ -1.16
VPS8-214ENST00000458721 MRC1P22897 1456 aa7.81□□□□□ -1.16
VPS8-214ENST00000458721 TIAM2Q8IVF5 1701 aa7.81□□□□□ -1.16
VPS8-214ENST00000458721 CLSPNQ9HAW4 1339 aa7.8□□□□□ -1.16
VPS8-214ENST00000458721 KDM6AO15550 1401 aaPredicted RBP7.8□□□□□ -1.16
VPS8-214ENST00000458721 GRXCR2A6NFK2 248 aa7.8□□□□□ -1.16
VPS8-214ENST00000458721 PTPN5P54829 565 aa7.8□□□□□ -1.16
VPS8-214ENST00000458721 AMOTQ4VCS5 1084 aa7.8□□□□□ -1.16
VPS8-214ENST00000458721 TRAPPC3LQ5T215 181 aa7.8□□□□□ -1.16
VPS8-214ENST00000458721 LAPTM4BQ86VI4 370 aa7.8□□□□□ -1.16
VPS8-214ENST00000458721 RBM46Q8TBY0 533 aaKnown RBP7.8□□□□□ -1.16
VPS8-214ENST00000458721 ZNF526Q8TF50 670 aaPredicted RBP7.8□□□□□ -1.16
VPS8-214ENST00000458721 CARD14Q9BXL6 1004 aa7.8□□□□□ -1.16
VPS8-214ENST00000458721 ATG3Q9NT62 314 aa7.8□□□□□ -1.16
VPS8-214ENST00000458721 PLA2G2EQ9NZK7 142 aa7.8□□□□□ -1.16
VPS8-214ENST00000458721 KIAA1468Q9P260 1216 aa7.8□□□□□ -1.16
VPS8-214ENST00000458721 ASAP1Q9ULH1 1129 aa7.8□□□□□ -1.16
VPS8-214ENST00000458721 KDM2BQ8NHM5 1336 aa7.79□□□□□ -1.16
VPS8-214ENST00000458721 UBR2Q8IWV8 1755 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms