RNA–Protein interactions for RNA: ENST00000457226.2

SMARCA2-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-216ENST00000457226 NMRK2Q9NPI5 230 aa17.67■□□□□ 0.42
SMARCA2-216ENST00000457226 ERVV-1B6SEH8 477 aa17.66■□□□□ 0.42
SMARCA2-216ENST00000457226 SRGNP10124 158 aa17.66■□□□□ 0.42
SMARCA2-216ENST00000457226 EIF4A1P60842 406 aaKnown RBP17.66■□□□□ 0.42
SMARCA2-216ENST00000457226 DDX10Q13206 875 aaKnown RBP17.66■□□□□ 0.42
SMARCA2-216ENST00000457226 RBM46Q8TBY0 533 aaKnown RBP17.66■□□□□ 0.42
SMARCA2-216ENST00000457226 MASTLQ96GX5 879 aa17.66■□□□□ 0.42
SMARCA2-216ENST00000457226 NIP7Q9Y221 180 aaKnown RBP eCLIP17.66■□□□□ 0.42
SMARCA2-216ENST00000457226 ERBB4Q15303 1308 aa17.66■□□□□ 0.42
SMARCA2-216ENST00000457226 APLP1P51693 650 aa17.65■□□□□ 0.42
SMARCA2-216ENST00000457226 RIPK4P57078 832 aa17.65■□□□□ 0.42
SMARCA2-216ENST00000457226 RASSF7Q02833 373 aa17.65■□□□□ 0.42
SMARCA2-216ENST00000457226 KIF6Q6ZMV9 814 aa17.65■□□□□ 0.42
SMARCA2-216ENST00000457226 LAMB4A4D0S4 1761 aa17.64■□□□□ 0.41
SMARCA2-216ENST00000457226 FSTL1Q12841 308 aa17.64■□□□□ 0.41
SMARCA2-216ENST00000457226 NYXQ9GZU5 481 aa17.64■□□□□ 0.41
SMARCA2-216ENST00000457226 TSPYL4Q9UJ04 414 aa17.64■□□□□ 0.41
SMARCA2-216ENST00000457226 LTBP3Q9NS15 1303 aa17.64■□□□□ 0.41
SMARCA2-216ENST00000457226 KDM3BQ7LBC6 1761 aa17.63■□□□□ 0.41
SMARCA2-216ENST00000457226 NFKBIEO00221 500 aa17.63■□□□□ 0.41
SMARCA2-216ENST00000457226 C21orf2O43822 256 aa17.63■□□□□ 0.41
SMARCA2-216ENST00000457226 NPR1P16066 1061 aa17.63■□□□□ 0.41
SMARCA2-216ENST00000457226 GTF2E1P29083 439 aaPredicted RBP17.63■□□□□ 0.41
SMARCA2-216ENST00000457226 WDR43Q15061 677 aaKnown RBP eCLIP17.63■□□□□ 0.41
SMARCA2-216ENST00000457226 DPY19L2Q6NUT2 758 aa17.63■□□□□ 0.41
SMARCA2-216ENST00000457226 CCDC24Q8N4L8 307 aa17.63■□□□□ 0.41
SMARCA2-216ENST00000457226 THUMPD2Q9BTF0 503 aaKnown RBP17.63■□□□□ 0.41
SMARCA2-216ENST00000457226 KLRG2A4D1S0 409 aaPredicted RBP17.62■□□□□ 0.41
SMARCA2-216ENST00000457226 GLTPD2A6NH11 291 aa17.62■□□□□ 0.41
SMARCA2-216ENST00000457226 PRPF40BQ6NWY9 871 aaKnown RBP17.62■□□□□ 0.41
SMARCA2-216ENST00000457226 TAOK3Q9H2K8 898 aa17.62■□□□□ 0.41
SMARCA2-216ENST00000457226 ANKRD31Q8N7Z5 1873 aa17.61■□□□□ 0.41
SMARCA2-216ENST00000457226 TMPOP42166 694 aaKnown RBP17.61■□□□□ 0.41
SMARCA2-216ENST00000457226 RRAGCQ9HB90 399 aa17.61■□□□□ 0.41
SMARCA2-216ENST00000457226 RRP7AQ9Y3A4 280 aaKnown RBP17.61■□□□□ 0.41
SMARCA2-216ENST00000457226 MAP3K15Q6ZN16 1313 aa17.61■□□□□ 0.41
SMARCA2-216ENST00000457226 TNRC6CQ9HCJ0 1690 aaKnown RBP17.61■□□□□ 0.41
SMARCA2-216ENST00000457226 DLG5Q8TDM6 1919 aa17.6■□□□□ 0.41
SMARCA2-216ENST00000457226 VEGFAP15692 232 aaPredicted RBP17.6■□□□□ 0.41
SMARCA2-216ENST00000457226 ALDH1B1P30837 517 aa17.6■□□□□ 0.41
SMARCA2-216ENST00000457226 IBTKQ9P2D0 1353 aaPredicted RBP17.59■□□□□ 0.41
SMARCA2-216ENST00000457226 MYL6BP14649 208 aa17.59■□□□□ 0.41
SMARCA2-216ENST00000457226 HLFQ16534 295 aa17.59■□□□□ 0.41
SMARCA2-216ENST00000457226 ERFEQ4G0M1 354 aa17.59■□□□□ 0.41
SMARCA2-216ENST00000457226 NGEFQ8N5V2 710 aa17.59■□□□□ 0.41
SMARCA2-216ENST00000457226 RUNDC1Q96C34 613 aa17.59■□□□□ 0.41
SMARCA2-216ENST00000457226 CEP350Q5VT06 3117 aa17.59■□□□□ 0.41
SMARCA2-216ENST00000457226 COL11A2P13942 1736 aaPredicted RBP17.58■□□□□ 0.41
SMARCA2-216ENST00000457226 CCDC93Q567U6 631 aa17.58■□□□□ 0.4
SMARCA2-216ENST00000457226 SMC1BQ8NDV3 1235 aa17.58■□□□□ 0.4
SMARCA2-216ENST00000457226 ZNF219Q9P2Y4 722 aaPredicted RBP17.58■□□□□ 0.4
SMARCA2-216ENST00000457226 SBF1O95248 1867 aa17.57■□□□□ 0.4
SMARCA2-216ENST00000457226 PRELPP51888 382 aa17.57■□□□□ 0.4
SMARCA2-216ENST00000457226 RTKN2Q8IZC4 609 aa17.57■□□□□ 0.4
SMARCA2-216ENST00000457226 FAM177BA6PVY3 158 aa17.56■□□□□ 0.4
SMARCA2-216ENST00000457226 PARP10Q53GL7 1025 aa17.56■□□□□ 0.4
SMARCA2-216ENST00000457226 RIC1Q4ADV7 1423 aa17.55■□□□□ 0.4
SMARCA2-216ENST00000457226 CRY2Q49AN0 593 aa17.55■□□□□ 0.4
SMARCA2-216ENST00000457226 GRIPAP1Q4V328 841 aa17.55■□□□□ 0.4
SMARCA2-216ENST00000457226 GIGYF2Q6Y7W6 1299 aaKnown RBP17.55■□□□□ 0.4
SMARCA2-216ENST00000457226 TTLL7Q6ZT98 887 aa17.55■□□□□ 0.4
SMARCA2-216ENST00000457226 PPP1R42Q7Z4L9 355 aa17.55■□□□□ 0.4
SMARCA2-216ENST00000457226 C7orf43Q8WVR3 580 aa17.55■□□□□ 0.4
SMARCA2-216ENST00000457226 ZBTB3Q9H5J0 574 aa17.55■□□□□ 0.4
SMARCA2-216ENST00000457226 TIAM2Q8IVF5 1701 aa17.55■□□□□ 0.4
SMARCA2-216ENST00000457226 ARFGEF2Q9Y6D5 1785 aa17.54■□□□□ 0.4
SMARCA2-216ENST00000457226 NEUROD2Q15784 382 aa17.54■□□□□ 0.4
SMARCA2-216ENST00000457226 CC2D2BQ6DHV5 1058 aa17.54■□□□□ 0.4
SMARCA2-216ENST00000457226 RPGRQ92834 1020 aaKnown RBP17.54■□□□□ 0.4
SMARCA2-216ENST00000457226 PRKRIP1Q9H875 184 aaPredicted RBP17.54■□□□□ 0.4
SMARCA2-216ENST00000457226 RNF123Q5XPI4 1314 aa17.53■□□□□ 0.4
SMARCA2-216ENST00000457226 CHL1O00533 1208 aa17.53■□□□□ 0.4
SMARCA2-216ENST00000457226 EIF2S2P20042 333 aaKnown RBP17.53■□□□□ 0.4
SMARCA2-216ENST00000457226 FKBP4Q02790 459 aaKnown RBP eCLIP17.53■□□□□ 0.4
SMARCA2-216ENST00000457226 HSP90AB3PQ58FF7 597 aa17.53■□□□□ 0.4
SMARCA2-216ENST00000457226 CCDC146Q8IYE0 955 aa17.53■□□□□ 0.4
SMARCA2-216ENST00000457226 ZNF34Q8IZ26 560 aa17.53■□□□□ 0.4
SMARCA2-216ENST00000457226 FER1L6Q2WGJ9 1857 aa17.52■□□□□ 0.4
SMARCA2-216ENST00000457226 HOXB7P09629 217 aa17.52■□□□□ 0.4
SMARCA2-216ENST00000457226 GPTP24298 496 aa17.52■□□□□ 0.4
SMARCA2-216ENST00000457226 ADAMTS8Q9UP79 889 aa17.52■□□□□ 0.4
SMARCA2-216ENST00000457226 HOXA10P31260 410 aaPredicted RBP17.51■□□□□ 0.39
SMARCA2-216ENST00000457226 CALD1Q05682 793 aaKnown RBP17.51■□□□□ 0.39
SMARCA2-216ENST00000457226 PDIA6Q15084 440 aa17.51■□□□□ 0.39
SMARCA2-216ENST00000457226 NUTM1Q86Y26 1132 aa17.51■□□□□ 0.39
SMARCA2-216ENST00000457226 UBN2Q6ZU65 1347 aa17.5■□□□□ 0.39
SMARCA2-216ENST00000457226 SLX4Q8IY92 1834 aa17.5■□□□□ 0.39
SMARCA2-216ENST00000457226 IQCA1LA6NCM1 817 aa17.5■□□□□ 0.39
SMARCA2-216ENST00000457226 SUSD4Q5VX71 490 aa17.5■□□□□ 0.39
SMARCA2-216ENST00000457226 LRP10Q7Z4F1 713 aa17.5■□□□□ 0.39
SMARCA2-216ENST00000457226 RBM17Q96I25 401 aaKnown RBP17.5■□□□□ 0.39
SMARCA2-216ENST00000457226 TMX4Q9H1E5 349 aaPredicted RBP17.5■□□□□ 0.39
SMARCA2-216ENST00000457226 DDX21Q9NR30 783 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMARCA2-216ENST00000457226 TRIM35Q9UPQ4 493 aa17.5■□□□□ 0.39
SMARCA2-216ENST00000457226 WDR90Q96KV7 1748 aa17.5■□□□□ 0.39
SMARCA2-216ENST00000457226 NTSR2O95665 410 aa17.49■□□□□ 0.39
SMARCA2-216ENST00000457226 DNAJC5GQ8N7S2 189 aa17.49■□□□□ 0.39
SMARCA2-216ENST00000457226 CFAP44Q96MT7 982 aa17.49■□□□□ 0.39
SMARCA2-216ENST00000457226 NLRP3Q96P20 1036 aa17.49■□□□□ 0.39
SMARCA2-216ENST00000457226 CRAMP1Q96RY5 1269 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms