RNA–Protein interactions for RNA: ENST00000456932.6

CSPG4P10-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

BASIC

Gene CSPG4P10, Length 4,817 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-201ENST00000456932 ALDH1L1O75891 902 aa13.37□□□□□ -0.27
CSPG4P10-201ENST00000456932 TPD52L1Q16890 204 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P10-201ENST00000456932 ZSCAN31Q96LW9 406 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P10-201ENST00000456932 ESYT1Q9BSJ8 1104 aa13.37□□□□□ -0.27
CSPG4P10-201ENST00000456932 RALYLQ86SE5 291 aaKnown RBP13.37□□□□□ -0.27
CSPG4P10-201ENST00000456932 FOSBP53539 338 aa13.37□□□□□ -0.27
CSPG4P10-201ENST00000456932 PRPF40BQ6NWY9 871 aaKnown RBP13.37□□□□□ -0.27
CSPG4P10-201ENST00000456932 KSR2Q6VAB6 950 aa13.37□□□□□ -0.27
CSPG4P10-201ENST00000456932 C19orf44Q9H6X5 657 aa13.37□□□□□ -0.27
CSPG4P10-201ENST00000456932 MROH1Q8NDA8 1641 aa13.36□□□□□ -0.27
CSPG4P10-201ENST00000456932 PNPLA6Q8IY17 1366 aa13.36□□□□□ -0.27
CSPG4P10-201ENST00000456932 FRMPD1Q5SYB0 1578 aa13.36□□□□□ -0.27
CSPG4P10-201ENST00000456932 CCDC158Q5M9N0 1113 aa13.36□□□□□ -0.27
CSPG4P10-201ENST00000456932 ARHGEF40Q8TER5 1519 aa13.36□□□□□ -0.27
CSPG4P10-201ENST00000456932 CCDC57Q2TAC2 916 aa13.36□□□□□ -0.27
CSPG4P10-201ENST00000456932 PDCL2Q8N4E4 241 aa13.36□□□□□ -0.27
CSPG4P10-201ENST00000456932 ADAMTS2O95450 1211 aa13.36□□□□□ -0.27
CSPG4P10-201ENST00000456932 SLC39A6Q13433 755 aa13.36□□□□□ -0.27
CSPG4P10-201ENST00000456932 ORAI2Q96SN7 254 aa13.36□□□□□ -0.27
CSPG4P10-201ENST00000456932 ACBD3Q9H3P7 528 aa13.36□□□□□ -0.27
CSPG4P10-201ENST00000456932 CTDP1Q9Y5B0 961 aaPredicted RBP13.36□□□□□ -0.27
CSPG4P10-201ENST00000456932 NPHP3Q7Z494 1330 aa13.35□□□□□ -0.27
CSPG4P10-201ENST00000456932 RNMTO43148 476 aaKnown RBP13.35□□□□□ -0.27
CSPG4P10-201ENST00000456932 TTC39AQ5SRH9 613 aa13.35□□□□□ -0.27
CSPG4P10-201ENST00000456932 CLTCQ00610 1675 aaKnown RBP13.35□□□□□ -0.27
CSPG4P10-201ENST00000456932 PPLO60437 1756 aa13.35□□□□□ -0.27
CSPG4P10-201ENST00000456932 SNRPA1P09661 255 aaKnown RBP13.35□□□□□ -0.27
CSPG4P10-201ENST00000456932 SYNE3Q6ZMZ3 975 aa13.35□□□□□ -0.27
CSPG4P10-201ENST00000456932 EVI5LQ96CN4 794 aa13.35□□□□□ -0.27
CSPG4P10-201ENST00000456932 TSPY26PQ9H489 355 aa13.35□□□□□ -0.27
CSPG4P10-201ENST00000456932 USP19O94966 1318 aa13.35□□□□□ -0.27
CSPG4P10-201ENST00000456932 A0A087WZG4 1122 aa13.34□□□□□ -0.27
CSPG4P10-201ENST00000456932 CEP126Q9P2H0 1117 aa13.34□□□□□ -0.27
CSPG4P10-201ENST00000456932 BAG4O95429 457 aaKnown RBP13.34□□□□□ -0.27
CSPG4P10-201ENST00000456932 STK3Q13188 491 aa13.34□□□□□ -0.27
CSPG4P10-201ENST00000456932 NBPF6Q5VWK0 638 aa13.34□□□□□ -0.27
CSPG4P10-201ENST00000456932 NBPF4Q96M43 638 aa13.34□□□□□ -0.27
CSPG4P10-201ENST00000456932 USP26Q9BXU7 913 aa13.34□□□□□ -0.27
CSPG4P10-201ENST00000456932 HOXB7P09629 217 aa13.34□□□□□ -0.27
CSPG4P10-201ENST00000456932 TRERF1Q96PN7 1200 aa13.34□□□□□ -0.27
CSPG4P10-201ENST00000456932 LGR6Q9HBX8 967 aa13.34□□□□□ -0.27
CSPG4P10-201ENST00000456932 GRM8O00222 908 aa13.33□□□□□ -0.27
CSPG4P10-201ENST00000456932 RDXP35241 583 aaKnown RBP13.33□□□□□ -0.27
CSPG4P10-201ENST00000456932 KRT32Q14532 448 aa13.33□□□□□ -0.27
CSPG4P10-201ENST00000456932 RASSF8Q8NHQ8 419 aa13.33□□□□□ -0.27
CSPG4P10-201ENST00000456932 XAGE3Q8WTP9 111 aa13.33□□□□□ -0.27
CSPG4P10-201ENST00000456932 CNNM1Q9NRU3 951 aa13.33□□□□□ -0.27
CSPG4P10-201ENST00000456932 LRRC7Q96NW7 1537 aa13.33□□□□□ -0.28
CSPG4P10-201ENST00000456932 RTL1A6NKG5 1358 aa13.33□□□□□ -0.28
CSPG4P10-201ENST00000456932 IGSF1Q8N6C5 1336 aa13.33□□□□□ -0.28
CSPG4P10-201ENST00000456932 LETM1O95202 739 aaPredicted RBP13.33□□□□□ -0.28
CSPG4P10-201ENST00000456932 IPO7O95373 1038 aaKnown RBP13.33□□□□□ -0.28
CSPG4P10-201ENST00000456932 LARP1BQ659C4 914 aaKnown RBP13.33□□□□□ -0.28
CSPG4P10-201ENST00000456932 SKIDA1Q1XH10 827 aa13.33□□□□□ -0.28
CSPG4P10-201ENST00000456932 ANKRD13DQ6ZTN6 518 aa13.33□□□□□ -0.28
CSPG4P10-201ENST00000456932 LINS1Q8NG48 757 aa13.33□□□□□ -0.28
CSPG4P10-201ENST00000456932 UBE3BQ7Z3V4 1068 aa13.33□□□□□ -0.28
CSPG4P10-201ENST00000456932 TMOD3Q9NYL9 352 aa13.33□□□□□ -0.28
CSPG4P10-201ENST00000456932 PREX1Q8TCU6 1659 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 FAM177BA6PVY3 158 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 CDR1P51861 262 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 ANAPC15P60006 121 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 LEKR1Q6ZMV7 388 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 CCDC83Q8IWF9 413 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 SPC24Q8NBT2 197 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 IL17REQ8NFR9 667 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 TMX3Q96JJ7 454 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 DLC1Q96QB1 1528 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 COPS6Q7L5N1 327 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 LIMCH1Q9UPQ0 1083 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 ATP5J2-PTCD1G3V325 749 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 NFXL1Q6ZNB6 911 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 TBC1D2BQ9UPU7 963 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 IQSEC2Q5JU85 1478 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 TRIM29Q14134 588 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 HSP90AB3PQ58FF7 597 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 SASS6Q6UVJ0 657 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 CABLES1Q8TDN4 633 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 AGLP35573 1532 aa13.32□□□□□ -0.28
CSPG4P10-201ENST00000456932 FKBP4Q02790 459 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSPG4P10-201ENST00000456932 CWF19L2Q2TBE0 894 aaKnown RBP13.31□□□□□ -0.28
CSPG4P10-201ENST00000456932 CCDC73Q6ZRK6 1079 aa13.31□□□□□ -0.28
CSPG4P10-201ENST00000456932 CCDC112Q8NEF3 446 aa13.31□□□□□ -0.28
CSPG4P10-201ENST00000456932 TRIM5Q9C035 493 aa13.31□□□□□ -0.28
CSPG4P10-201ENST00000456932 PES1O00541 588 aaKnown RBP13.31□□□□□ -0.28
CSPG4P10-201ENST00000456932 MARCH6O60337 910 aa13.31□□□□□ -0.28
CSPG4P10-201ENST00000456932 STARD3NLO95772 234 aa13.31□□□□□ -0.28
CSPG4P10-201ENST00000456932 RAB3GAP1Q15042 981 aa13.31□□□□□ -0.28
CSPG4P10-201ENST00000456932 CCDC85AQ96PX6 553 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P10-201ENST00000456932 PTCH1Q13635 1447 aa13.31□□□□□ -0.28
CSPG4P10-201ENST00000456932 PNMA6EA0A0J9YXQ4 647 aa13.3□□□□□ -0.28
CSPG4P10-201ENST00000456932 KRT85P78386 507 aa13.3□□□□□ -0.28
CSPG4P10-201ENST00000456932 NFATC2IPQ8NCF5 419 aa13.3□□□□□ -0.28
CSPG4P10-201ENST00000456932 CHMLP26374 656 aa13.3□□□□□ -0.28
CSPG4P10-201ENST00000456932 SH2B1Q9NRF2 756 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P10-201ENST00000456932 PA2G4Q9UQ80 394 aaKnown RBP13.3□□□□□ -0.28
CSPG4P10-201ENST00000456932 JARID2Q92833 1246 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P10-201ENST00000456932 CPSF1Q10570 1443 aaKnown RBP13.3□□□□□ -0.28
CSPG4P10-201ENST00000456932 GSPT1P15170 499 aaKnown RBP13.3□□□□□ -0.28
CSPG4P10-201ENST00000456932 AKAP17AQ02040 695 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms