RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ATP10DQ9P241 1426 aa22.62■■□□□ 1.21
USP39-208ENST00000455732 SETDB2Q96T68 719 aa22.6■■□□□ 1.21
USP39-208ENST00000455732 LAS1LQ9Y4W2 734 aaKnown RBP22.6■■□□□ 1.21
USP39-208ENST00000455732 ADCY9O60503 1353 aa22.6■■□□□ 1.21
USP39-208ENST00000455732 PRR5LQ6MZQ0 368 aa22.59■■□□□ 1.21
USP39-208ENST00000455732 COL11A2P13942 1736 aaPredicted RBP22.59■■□□□ 1.21
USP39-208ENST00000455732 HOXB7P09629 217 aa22.58■■□□□ 1.21
USP39-208ENST00000455732 GNAI1P63096 354 aa22.58■■□□□ 1.21
USP39-208ENST00000455732 DALRD3Q5D0E6 543 aaKnown RBP22.58■■□□□ 1.21
USP39-208ENST00000455732 MBIPQ9NS73 344 aa22.58■■□□□ 1.21
USP39-208ENST00000455732 SBF1O95248 1867 aa22.58■■□□□ 1.2
USP39-208ENST00000455732 ZNF652Q9Y2D9 606 aa22.57■■□□□ 1.2
USP39-208ENST00000455732 WWC1Q8IX03 1113 aa22.56■■□□□ 1.2
USP39-208ENST00000455732 HLFQ16534 295 aa22.55■■□□□ 1.2
USP39-208ENST00000455732 KRT24Q2M2I5 525 aa22.55■■□□□ 1.2
USP39-208ENST00000455732 LRP10Q7Z4F1 713 aa22.55■■□□□ 1.2
USP39-208ENST00000455732 CNBD1Q8NA66 436 aa22.55■■□□□ 1.2
USP39-208ENST00000455732 BRIP1Q9BX63 1249 aa22.55■■□□□ 1.2
USP39-208ENST00000455732 MYL6BP14649 208 aa22.54■■□□□ 1.2
USP39-208ENST00000455732 PDIA6Q15084 440 aa22.54■■□□□ 1.2
USP39-208ENST00000455732 ARHGAP27Q6ZUM4 889 aa22.54■■□□□ 1.2
USP39-208ENST00000455732 C2CD5Q86YS7 1000 aa22.54■■□□□ 1.2
USP39-208ENST00000455732 CCDC24Q8N4L8 307 aa22.54■■□□□ 1.2
USP39-208ENST00000455732 IL16Q14005 1332 aa22.54■■□□□ 1.2
USP39-208ENST00000455732 CACNA1SQ13698 1873 aa22.54■■□□□ 1.2
USP39-208ENST00000455732 ERVV-1B6SEH8 477 aa22.53■■□□□ 1.2
USP39-208ENST00000455732 H0YIN7 160 aa22.53■■□□□ 1.2
USP39-208ENST00000455732 EIF2S2P20042 333 aaKnown RBP22.53■■□□□ 1.2
USP39-208ENST00000455732 TTLL7Q6ZT98 887 aa22.53■■□□□ 1.2
USP39-208ENST00000455732 FAM9BQ8IZU0 186 aa22.53■■□□□ 1.2
USP39-208ENST00000455732 NGEFQ8N5V2 710 aa22.53■■□□□ 1.2
USP39-208ENST00000455732 GPBP1L1Q9HC44 474 aaPredicted RBP22.53■■□□□ 1.2
USP39-208ENST00000455732 MAP3K15Q6ZN16 1313 aa22.53■■□□□ 1.2
USP39-208ENST00000455732 PDE6BP35913 854 aa22.52■■□□□ 1.2
USP39-208ENST00000455732 PDZRN3Q9UPQ7 1066 aa22.52■■□□□ 1.2
USP39-208ENST00000455732 NIP7Q9Y221 180 aaKnown RBP eCLIP22.52■■□□□ 1.2
USP39-208ENST00000455732 ARFGEF2Q9Y6D5 1785 aa22.51■■□□□ 1.19
USP39-208ENST00000455732 CCER2I3L3R5 266 aa22.51■■□□□ 1.19
USP39-208ENST00000455732 KIF6Q6ZMV9 814 aa22.51■■□□□ 1.19
USP39-208ENST00000455732 NBPF5PQ86XG9 351 aaPredicted RBP22.51■■□□□ 1.19
USP39-208ENST00000455732 TTLL6Q8N841 843 aa22.51■■□□□ 1.19
USP39-208ENST00000455732 CCDC88AQ3V6T2 1871 aa22.51■■□□□ 1.19
USP39-208ENST00000455732 CEP350Q5VT06 3117 aa22.51■■□□□ 1.19
USP39-208ENST00000455732 ST5P78524 1137 aa22.5■■□□□ 1.19
USP39-208ENST00000455732 DUSP27Q5VZP5 1158 aa22.5■■□□□ 1.19
USP39-208ENST00000455732 ZNF526Q8TF50 670 aaPredicted RBP22.5■■□□□ 1.19
USP39-208ENST00000455732 PROSER3Q2NL68 480 aa22.49■■□□□ 1.19
USP39-208ENST00000455732 HDGFL1Q5TGJ6 251 aa22.49■■□□□ 1.19
USP39-208ENST00000455732 DDX21Q9NR30 783 aaKnown RBP eCLIP22.49■■□□□ 1.19
USP39-208ENST00000455732 SLX4Q8IY92 1834 aa22.49■■□□□ 1.19
USP39-208ENST00000455732 NPHP1O15259 732 aa22.48■■□□□ 1.19
USP39-208ENST00000455732 ANKRD36CQ5JPF3 1778 aa22.48■■□□□ 1.19
USP39-208ENST00000455732 FER1L6Q2WGJ9 1857 aa22.47■■□□□ 1.19
USP39-208ENST00000455732 ANXA1P04083 346 aa22.47■■□□□ 1.19
USP39-208ENST00000455732 TPTE2Q6XPS3 522 aa22.47■■□□□ 1.19
USP39-208ENST00000455732 WDR63Q8IWG1 891 aa22.47■■□□□ 1.19
USP39-208ENST00000455732 ZBTB3Q9H5J0 574 aa22.47■■□□□ 1.19
USP39-208ENST00000455732 KLRG2A4D1S0 409 aaPredicted RBP22.46■■□□□ 1.19
USP39-208ENST00000455732 SRGNP10124 158 aa22.46■■□□□ 1.19
USP39-208ENST00000455732 NECTIN2Q92692 538 aa22.46■■□□□ 1.19
USP39-208ENST00000455732 CHPF2Q9P2E5 772 aa22.46■■□□□ 1.19
USP39-208ENST00000455732 DBF4Q9UBU7 674 aaPredicted RBP22.46■■□□□ 1.19
USP39-208ENST00000455732 GIGYF2Q6Y7W6 1299 aaKnown RBP22.45■■□□□ 1.18
USP39-208ENST00000455732 ZNF622Q969S3 477 aaKnown RBP eCLIP22.45■■□□□ 1.18
USP39-208ENST00000455732 TNRC6CQ9HCJ0 1690 aaKnown RBP22.45■■□□□ 1.18
USP39-208ENST00000455732 FAM177BA6PVY3 158 aa22.44■■□□□ 1.18
USP39-208ENST00000455732 STYK1Q6J9G0 422 aa22.44■■□□□ 1.18
USP39-208ENST00000455732 UBN2Q6ZU65 1347 aa22.44■■□□□ 1.18
USP39-208ENST00000455732 ZNF34Q8IZ26 560 aa22.44■■□□□ 1.18
USP39-208ENST00000455732 C8orf58Q8NAV2 365 aa22.44■■□□□ 1.18
USP39-208ENST00000455732 TSR2Q969E8 191 aaKnown RBP22.44■■□□□ 1.18
USP39-208ENST00000455732 CHMP4AQ9BY43 222 aa22.44■■□□□ 1.18
USP39-208ENST00000455732 IBTKQ9P2D0 1353 aaPredicted RBP22.43■■□□□ 1.18
USP39-208ENST00000455732 C9orf131Q5VYM1 1079 aa22.43■■□□□ 1.18
USP39-208ENST00000455732 COPS6Q7L5N1 327 aa22.43■■□□□ 1.18
USP39-208ENST00000455732 XAGE3Q8WTP9 111 aa22.43■■□□□ 1.18
USP39-208ENST00000455732 DICER1Q9UPY3 1922 aaKnown RBP22.42■■□□□ 1.18
USP39-208ENST00000455732 GPTP24298 496 aa22.42■■□□□ 1.18
USP39-208ENST00000455732 MASTLQ96GX5 879 aa22.42■■□□□ 1.18
USP39-208ENST00000455732 HYPKQ9NX55 129 aa22.42■■□□□ 1.18
USP39-208ENST00000455732 FANCIQ9NVI1 1328 aa22.41■■□□□ 1.18
USP39-208ENST00000455732 DIEXFQ68CQ4 756 aaKnown RBP22.41■■□□□ 1.18
USP39-208ENST00000455732 CNKSR1Q969H4 720 aa22.41■■□□□ 1.18
USP39-208ENST00000455732 NYXQ9GZU5 481 aa22.41■■□□□ 1.18
USP39-208ENST00000455732 SALL2Q9Y467 1007 aaPredicted RBP22.41■■□□□ 1.18
USP39-208ENST00000455732 ABCC12Q96J65 1359 aa22.4■■□□□ 1.18
USP39-208ENST00000455732 ZNF521Q96K83 1311 aa22.4■■□□□ 1.18
USP39-208ENST00000455732 PRELPP51888 382 aa22.4■■□□□ 1.18
USP39-208ENST00000455732 RASSF7Q02833 373 aa22.4■■□□□ 1.18
USP39-208ENST00000455732 SUSD4Q5VX71 490 aa22.4■■□□□ 1.18
USP39-208ENST00000455732 TSPYL6Q8N831 410 aa22.4■■□□□ 1.18
USP39-208ENST00000455732 RIC1Q4ADV7 1423 aa22.4■■□□□ 1.18
USP39-208ENST00000455732 NFKBIEO00221 500 aa22.39■■□□□ 1.17
USP39-208ENST00000455732 ELL2O00472 640 aaPredicted RBP22.39■■□□□ 1.17
USP39-208ENST00000455732 NPR1P16066 1061 aa22.39■■□□□ 1.17
USP39-208ENST00000455732 HSP90AB3PQ58FF7 597 aa22.39■■□□□ 1.17
USP39-208ENST00000455732 PRPF40BQ6NWY9 871 aaKnown RBP22.39■■□□□ 1.17
USP39-208ENST00000455732 NUTM1Q86Y26 1132 aa22.39■■□□□ 1.17
USP39-208ENST00000455732 RNF181Q9P0P0 153 aa22.39■■□□□ 1.17
USP39-208ENST00000455732 C21orf2O43822 256 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms