RNA–Protein interactions for RNA: ENST00000455144.6

XPC-204, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 4

Gene XPC, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-204ENST00000455144 NRXN2Q9P2S2 1712 aa9.17□□□□□ -0.94
XPC-204ENST00000455144 C10orf71Q711Q0 1435 aa9.17□□□□□ -0.94
XPC-204ENST00000455144 NPHP1O15259 732 aa9.17□□□□□ -0.94
XPC-204ENST00000455144 A1BGP04217 495 aa9.17□□□□□ -0.94
XPC-204ENST00000455144 EIF4A1P60842 406 aaKnown RBP9.17□□□□□ -0.94
XPC-204ENST00000455144 SMIM5Q71RC9 77 aa9.17□□□□□ -0.94
XPC-204ENST00000455144 DZIP3Q86Y13 1208 aaKnown RBP9.17□□□□□ -0.94
XPC-204ENST00000455144 NLGN2Q8NFZ4 835 aa9.17□□□□□ -0.94
XPC-204ENST00000455144 SETDB2Q96T68 719 aa9.17□□□□□ -0.94
XPC-204ENST00000455144 USP16Q9Y5T5 823 aa9.17□□□□□ -0.94
XPC-204ENST00000455144 BRCA1P38398 1863 aaKnown RBP9.17□□□□□ -0.94
XPC-204ENST00000455144 CARMIL3Q8ND23 1372 aa9.16□□□□□ -0.94
XPC-204ENST00000455144 POLRMTO00411 1230 aaKnown RBP9.16□□□□□ -0.94
XPC-204ENST00000455144 KCNQ3O43525 872 aa9.16□□□□□ -0.94
XPC-204ENST00000455144 GIGYF1O75420 1035 aaPredicted RBP9.16□□□□□ -0.94
XPC-204ENST00000455144 SERPINB2P05120 415 aa9.16□□□□□ -0.94
XPC-204ENST00000455144 GNAI1P63096 354 aa9.16□□□□□ -0.94
XPC-204ENST00000455144 GSE1Q14687 1217 aa9.16□□□□□ -0.94
XPC-204ENST00000455144 NEUROD2Q15784 382 aa9.16□□□□□ -0.94
XPC-204ENST00000455144 NGEFQ8N5V2 710 aa9.16□□□□□ -0.94
XPC-204ENST00000455144 BBXQ8WY36 941 aaPredicted RBP9.16□□□□□ -0.94
XPC-204ENST00000455144 PIM2Q9P1W9 311 aa9.16□□□□□ -0.94
XPC-204ENST00000455144 NUP98P52948 1817 aa9.16□□□□□ -0.94
XPC-204ENST00000455144 HOXB7P09629 217 aa9.15□□□□□ -0.94
XPC-204ENST00000455144 PDE6BP35913 854 aa9.15□□□□□ -0.94
XPC-204ENST00000455144 ST5P78524 1137 aa9.15□□□□□ -0.94
XPC-204ENST00000455144 NFIXQ14938 502 aa9.15□□□□□ -0.94
XPC-204ENST00000455144 KIF6Q6ZMV9 814 aa9.15□□□□□ -0.94
XPC-204ENST00000455144 CCDC146Q8IYE0 955 aa9.15□□□□□ -0.94
XPC-204ENST00000455144 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.15□□□□□ -0.94
XPC-204ENST00000455144 TBC1D2BQ9UPU7 963 aa9.15□□□□□ -0.94
XPC-204ENST00000455144 CACNA1FO60840 1977 aa9.15□□□□□ -0.95
XPC-204ENST00000455144 DLEC1Q9Y238 1755 aa9.14□□□□□ -0.95
XPC-204ENST00000455144 KIAA1551Q9HCM1 1747 aa9.14□□□□□ -0.95
XPC-204ENST00000455144 ERVV-1B6SEH8 477 aa9.14□□□□□ -0.95
XPC-204ENST00000455144 H0YIN7 160 aa9.14□□□□□ -0.95
XPC-204ENST00000455144 CHL1O00533 1208 aa9.14□□□□□ -0.95
XPC-204ENST00000455144 CHADLQ6NUI6 762 aa9.14□□□□□ -0.95
XPC-204ENST00000455144 TPTE2Q6XPS3 522 aa9.14□□□□□ -0.95
XPC-204ENST00000455144 CFAP44Q96MT7 982 aa9.14□□□□□ -0.95
XPC-204ENST00000455144 NYXQ9GZU5 481 aa9.14□□□□□ -0.95
XPC-204ENST00000455144 MRS2Q9HD23 443 aa9.14□□□□□ -0.95
XPC-204ENST00000455144 MIS18AQ9NYP9 233 aa9.14□□□□□ -0.95
XPC-204ENST00000455144 PXDNLA1KZ92 1463 aa9.14□□□□□ -0.95
XPC-204ENST00000455144 CAMTA2O94983 1202 aa9.13□□□□□ -0.95
XPC-204ENST00000455144 DDR1Q08345 913 aa9.13□□□□□ -0.95
XPC-204ENST00000455144 HSP90AB3PQ58FF7 597 aa9.13□□□□□ -0.95
XPC-204ENST00000455144 DALRD3Q5D0E6 543 aaKnown RBP9.13□□□□□ -0.95
XPC-204ENST00000455144 THUMPD2Q9BTF0 503 aaKnown RBP9.13□□□□□ -0.95
XPC-204ENST00000455144 BRIP1Q9BX63 1249 aa9.13□□□□□ -0.95
XPC-204ENST00000455144 BCL2L12Q9HB09 334 aa9.13□□□□□ -0.95
XPC-204ENST00000455144 IFT57Q9NWB7 429 aa9.13□□□□□ -0.95
XPC-204ENST00000455144 BCS1LQ9Y276 419 aa9.13□□□□□ -0.95
XPC-204ENST00000455144 RRP7AQ9Y3A4 280 aaKnown RBP9.13□□□□□ -0.95
XPC-204ENST00000455144 LAS1LQ9Y4W2 734 aaKnown RBP9.13□□□□□ -0.95
XPC-204ENST00000455144 A0A0G2JLW4 131 aa9.12□□□□□ -0.95
XPC-204ENST00000455144 APAF1O14727 1248 aa9.12□□□□□ -0.95
XPC-204ENST00000455144 DPEP1P16444 411 aa9.12□□□□□ -0.95
XPC-204ENST00000455144 YBX3P16989 372 aaKnown RBP eCLIP9.12□□□□□ -0.95
XPC-204ENST00000455144 GTF2E1P29083 439 aaPredicted RBP9.12□□□□□ -0.95
XPC-204ENST00000455144 CCDC27Q2M243 656 aa9.12□□□□□ -0.95
XPC-204ENST00000455144 TBC1D9BQ66K14 1250 aa9.12□□□□□ -0.95
XPC-204ENST00000455144 BICDL1Q6ZP65 573 aa9.12□□□□□ -0.95
XPC-204ENST00000455144 CNBD1Q8NA66 436 aa9.12□□□□□ -0.95
XPC-204ENST00000455144 TRIM35Q9UPQ4 493 aa9.12□□□□□ -0.95
XPC-204ENST00000455144 MAP3K15Q6ZN16 1313 aa9.11□□□□□ -0.95
XPC-204ENST00000455144 NBPF26B4DH59 902 aa9.11□□□□□ -0.95
XPC-204ENST00000455144 EIF2S2P20042 333 aaKnown RBP9.11□□□□□ -0.95
XPC-204ENST00000455144 NUBP1P53384 320 aa9.11□□□□□ -0.95
XPC-204ENST00000455144 PARP10Q53GL7 1025 aa9.11□□□□□ -0.95
XPC-204ENST00000455144 SOGA3Q5TF21 947 aa9.11□□□□□ -0.95
XPC-204ENST00000455144 NBPF10Q6P3W6 841 aaKnown RBP9.11□□□□□ -0.95
XPC-204ENST00000455144 NBPF5PQ86XG9 351 aaPredicted RBP9.11□□□□□ -0.95
XPC-204ENST00000455144 NBPF15Q8N660 670 aa9.11□□□□□ -0.95
XPC-204ENST00000455144 TTLL6Q8N841 843 aa9.11□□□□□ -0.95
XPC-204ENST00000455144 DDX21Q9NR30 783 aaKnown RBP eCLIP9.11□□□□□ -0.95
XPC-204ENST00000455144 CREBZFQ9NS37 354 aa9.11□□□□□ -0.95
XPC-204ENST00000455144 DBF4Q9UBU7 674 aaPredicted RBP9.11□□□□□ -0.95
XPC-204ENST00000455144 NIP7Q9Y221 180 aaKnown RBP eCLIP9.11□□□□□ -0.95
XPC-204ENST00000455144 ANKRD36CQ5JPF3 1778 aa9.11□□□□□ -0.95
XPC-204ENST00000455144 RNF123Q5XPI4 1314 aa9.1□□□□□ -0.95
XPC-204ENST00000455144 ARFGEF2Q9Y6D5 1785 aa9.1□□□□□ -0.95
XPC-204ENST00000455144 PRAMEF22A3QJZ6 481 aa9.1□□□□□ -0.95
XPC-204ENST00000455144 MYL6BP14649 208 aa9.1□□□□□ -0.95
XPC-204ENST00000455144 PRR5LQ6MZQ0 368 aa9.1□□□□□ -0.95
XPC-204ENST00000455144 GIGYF2Q6Y7W6 1299 aaKnown RBP9.1□□□□□ -0.95
XPC-204ENST00000455144 ARHGAP27Q6ZUM4 889 aa9.1□□□□□ -0.95
XPC-204ENST00000455144 PPP1R42Q7Z4L9 355 aa9.1□□□□□ -0.95
XPC-204ENST00000455144 C2CD5Q86YS7 1000 aa9.1□□□□□ -0.95
XPC-204ENST00000455144 CNKSR1Q969H4 720 aa9.1□□□□□ -0.95
XPC-204ENST00000455144 HYPKQ9NX55 129 aa9.1□□□□□ -0.95
XPC-204ENST00000455144 SBF1O95248 1867 aa9.1□□□□□ -0.95
XPC-204ENST00000455144 CCDC88AQ3V6T2 1871 aa9.1□□□□□ -0.95
XPC-204ENST00000455144 ANKRD31Q8N7Z5 1873 aa9.1□□□□□ -0.95
XPC-204ENST00000455144 IBTKQ9P2D0 1353 aaPredicted RBP9.1□□□□□ -0.95
XPC-204ENST00000455144 IL16Q14005 1332 aa9.09□□□□□ -0.95
XPC-204ENST00000455144 CACNA1SQ13698 1873 aa9.09□□□□□ -0.95
XPC-204ENST00000455144 ATP10DQ9P241 1426 aa9.09□□□□□ -0.95
XPC-204ENST00000455144 HSP90B1P14625 803 aaKnown RBP9.09□□□□□ -0.95
XPC-204ENST00000455144 ALDH1B1P30837 517 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms