RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 CAMTA2O94983 1202 aa6.48□□□□□ -1.37
RIF1-207ENST00000454583 ADAMTS2O95450 1211 aa6.48□□□□□ -1.37
RIF1-207ENST00000454583 ZNF34Q8IZ26 560 aa6.48□□□□□ -1.37
RIF1-207ENST00000454583 PLA2G12BQ9BX93 195 aa6.48□□□□□ -1.37
RIF1-207ENST00000454583 QTRT2Q9H974 415 aaKnown RBP6.48□□□□□ -1.37
RIF1-207ENST00000454583 MYH15Q9Y2K3 1946 aa6.47□□□□□ -1.37
RIF1-207ENST00000454583 PPP4R2Q9NY27 417 aa6.47□□□□□ -1.37
RIF1-207ENST00000454583 RCAN3Q9UKA8 241 aa6.47□□□□□ -1.37
RIF1-207ENST00000454583 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.47□□□□□ -1.37
RIF1-207ENST00000454583 TWISTNBQ3B726 338 aaPredicted RBP6.47□□□□□ -1.37
RIF1-207ENST00000454583 MYH16Q9H6N6 1097 aa6.47□□□□□ -1.37
RIF1-207ENST00000454583 WDR90Q96KV7 1748 aa6.47□□□□□ -1.37
RIF1-207ENST00000454583 PHAXQ9H814 394 aaKnown RBP6.47□□□□□ -1.37
RIF1-207ENST00000454583 DDX21Q9NR30 783 aaKnown RBP eCLIP6.47□□□□□ -1.37
RIF1-207ENST00000454583 NLRP2Q9NX02 1062 aa6.47□□□□□ -1.37
RIF1-207ENST00000454583 ZNF827Q17R98 1081 aa6.46□□□□□ -1.37
RIF1-207ENST00000454583 ANKRD44Q8N8A2 993 aa6.46□□□□□ -1.37
RIF1-207ENST00000454583 BTBD11A6QL63 1104 aa6.46□□□□□ -1.38
RIF1-207ENST00000454583 SOX12O15370 315 aa6.46□□□□□ -1.38
RIF1-207ENST00000454583 TM4SF1P30408 202 aa6.46□□□□□ -1.38
RIF1-207ENST00000454583 SLC39A6Q13433 755 aa6.46□□□□□ -1.38
RIF1-207ENST00000454583 DDB1Q16531 1140 aa6.46□□□□□ -1.38
RIF1-207ENST00000454583 LTV1Q96GA3 475 aaPredicted RBP6.46□□□□□ -1.38
RIF1-207ENST00000454583 PNPLA7Q6ZV29 1317 aa6.46□□□□□ -1.38
RIF1-207ENST00000454583 FOXO4P98177 505 aa6.46□□□□□ -1.38
RIF1-207ENST00000454583 COL1A1P02452 1464 aaPredicted RBP6.45□□□□□ -1.38
RIF1-207ENST00000454583 USP42Q9H9J4 1324 aaKnown RBP6.45□□□□□ -1.38
RIF1-207ENST00000454583 CALD1Q05682 793 aaKnown RBP6.45□□□□□ -1.38
RIF1-207ENST00000454583 NOB1Q9ULX3 412 aaKnown RBP6.45□□□□□ -1.38
RIF1-207ENST00000454583 OTOFQ9HC10 1997 aa6.45□□□□□ -1.38
RIF1-207ENST00000454583 CDHR2Q9BYE9 1310 aa6.45□□□□□ -1.38
RIF1-207ENST00000454583 H7C1W4 665 aa6.45□□□□□ -1.38
RIF1-207ENST00000454583 PPM1GO15355 546 aaPredicted RBP6.45□□□□□ -1.38
RIF1-207ENST00000454583 ATF7IPQ6VMQ6 1270 aa6.45□□□□□ -1.38
RIF1-207ENST00000454583 USP44Q9H0E7 712 aa6.45□□□□□ -1.38
RIF1-207ENST00000454583 CHPF2Q9P2E5 772 aa6.45□□□□□ -1.38
RIF1-207ENST00000454583 PCDHB15Q9Y5E8 787 aa6.45□□□□□ -1.38
RIF1-207ENST00000454583 NAV1Q8NEY1 1877 aa6.45□□□□□ -1.38
RIF1-207ENST00000454583 CARMIL3Q8ND23 1372 aa6.45□□□□□ -1.38
RIF1-207ENST00000454583 MAPK8IP3Q9UPT6 1336 aa6.45□□□□□ -1.38
RIF1-207ENST00000454583 PRIM1P49642 420 aaKnown RBP6.44□□□□□ -1.38
RIF1-207ENST00000454583 RAPGEF4Q8WZA2 1011 aa6.44□□□□□ -1.38
RIF1-207ENST00000454583 STRN4Q9NRL3 753 aa6.44□□□□□ -1.38
RIF1-207ENST00000454583 ERVV-1B6SEH8 477 aa6.44□□□□□ -1.38
RIF1-207ENST00000454583 CSF1RP07333 972 aa6.44□□□□□ -1.38
RIF1-207ENST00000454583 HDAC1Q13547 482 aaPredicted RBP6.44□□□□□ -1.38
RIF1-207ENST00000454583 MVPQ14764 893 aaKnown RBP6.44□□□□□ -1.38
RIF1-207ENST00000454583 ATAD5Q96QE3 1844 aa6.44□□□□□ -1.38
RIF1-207ENST00000454583 EXOC5O00471 708 aa6.44□□□□□ -1.38
RIF1-207ENST00000454583 IL6STP40189 918 aaPredicted RBP6.44□□□□□ -1.38
RIF1-207ENST00000454583 SLC27A3Q5K4L6 730 aa6.44□□□□□ -1.38
RIF1-207ENST00000454583 VGLL2Q8N8G2 317 aa6.44□□□□□ -1.38
RIF1-207ENST00000454583 SNRPA1P09661 255 aaKnown RBP6.43□□□□□ -1.38
RIF1-207ENST00000454583 KRT27Q7Z3Y8 459 aa6.43□□□□□ -1.38
RIF1-207ENST00000454583 IL17RAQ96F46 866 aa6.43□□□□□ -1.38
RIF1-207ENST00000454583 ABCC12Q96J65 1359 aa6.43□□□□□ -1.38
RIF1-207ENST00000454583 KIF16BQ96L93 1317 aa6.43□□□□□ -1.38
RIF1-207ENST00000454583 LOC102724428A0A0B4J2F2 783 aa6.43□□□□□ -1.38
RIF1-207ENST00000454583 NTSR2O95665 410 aa6.43□□□□□ -1.38
RIF1-207ENST00000454583 IGHDP01880 384 aa6.43□□□□□ -1.38
RIF1-207ENST00000454583 SIK1P57059 783 aa6.43□□□□□ -1.38
RIF1-207ENST00000454583 SLC10A5Q5PT55 438 aa6.43□□□□□ -1.38
RIF1-207ENST00000454583 ANO8Q9HCE9 1232 aaPredicted RBP6.43□□□□□ -1.38
RIF1-207ENST00000454583 SENP3-EIF4A1A0A087X0R7 540 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 FLIIQ13045 1269 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 AAMPQ13685 434 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 TMEM57Q8N5G2 664 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 NGLY1Q96IV0 654 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 FMNL2Q96PY5 1086 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 TSPYL4Q9UJ04 414 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 MAP3K15Q6ZN16 1313 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 NUTM2BA6NNL0 878 aaPredicted RBP6.42□□□□□ -1.38
RIF1-207ENST00000454583 NEURL1BA8MQ27 555 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 NUTM2EB1AL46 878 aaPredicted RBP6.42□□□□□ -1.38
RIF1-207ENST00000454583 NUTM2AQ8IVF1 878 aaPredicted RBP6.42□□□□□ -1.38
RIF1-207ENST00000454583 SMC5Q8IY18 1101 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 CRKLP46109 303 aaKnown RBP6.42□□□□□ -1.38
RIF1-207ENST00000454583 HLFQ16534 295 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 CRY2Q49AN0 593 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 EPHA10Q5JZY3 1008 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 FAM196AQ6ZSG2 479 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 DNAJC10Q8IXB1 793 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 METTL22Q9BUU2 404 aaPredicted RBP6.42□□□□□ -1.38
RIF1-207ENST00000454583 ZBTB1Q9Y2K1 713 aa6.42□□□□□ -1.38
RIF1-207ENST00000454583 NOP58Q9Y2X3 529 aaKnown RBP6.42□□□□□ -1.38
RIF1-207ENST00000454583 PLIN1O60240 522 aa6.41□□□□□ -1.38
RIF1-207ENST00000454583 TTLL7Q6ZT98 887 aa6.41□□□□□ -1.38
RIF1-207ENST00000454583 PLBD2Q8NHP8 589 aa6.41□□□□□ -1.38
RIF1-207ENST00000454583 A0A0G2JMZ2 1700 aa6.41□□□□□ -1.38
RIF1-207ENST00000454583 KSR2Q6VAB6 950 aa6.41□□□□□ -1.38
RIF1-207ENST00000454583 DBF4Q9UBU7 674 aaPredicted RBP6.41□□□□□ -1.38
RIF1-207ENST00000454583 ILDR2Q71H61 639 aa6.41□□□□□ -1.38
RIF1-207ENST00000454583 SSH3Q8TE77 659 aa6.41□□□□□ -1.38
RIF1-207ENST00000454583 THSD7BQ9C0I4 1608 aa6.41□□□□□ -1.38
RIF1-207ENST00000454583 RPS6KA4O75676 772 aa6.4□□□□□ -1.38
RIF1-207ENST00000454583 CRBNQ96SW2 442 aa6.4□□□□□ -1.38
RIF1-207ENST00000454583 HYPKQ9NX55 129 aa6.4□□□□□ -1.38
RIF1-207ENST00000454583 RLFQ13129 1914 aa6.4□□□□□ -1.39
RIF1-207ENST00000454583 A1BGP04217 495 aa6.4□□□□□ -1.39
RIF1-207ENST00000454583 RXRBP28702 533 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms