RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 SNRKQ9NRH2 765 aa9.65□□□□□ -0.86
CUL3-208ENST00000454323 IQSEC3Q9UPP2 1182 aaPredicted RBP9.65□□□□□ -0.86
CUL3-208ENST00000454323 NRG1Q02297 640 aaPredicted RBP9.64□□□□□ -0.87
CUL3-208ENST00000454323 WASHC4Q2M389 1173 aa9.64□□□□□ -0.87
CUL3-208ENST00000454323 KRTAP1-3Q8IUG1 177 aa9.64□□□□□ -0.87
CUL3-208ENST00000454323 MDFIQ99750 246 aa9.64□□□□□ -0.87
CUL3-208ENST00000454323 ZNF295-AS1Q8N0V1 137 aa9.63□□□□□ -0.87
CUL3-208ENST00000454323 TBC1D2BQ9UPU7 963 aa9.63□□□□□ -0.87
CUL3-208ENST00000454323 TMEM229AB2RXF0 380 aa9.61□□□□□ -0.87
CUL3-208ENST00000454323 LZTS3O60299 673 aaPredicted RBP9.61□□□□□ -0.87
CUL3-208ENST00000454323 SEMA3FQ13275 785 aa9.61□□□□□ -0.87
CUL3-208ENST00000454323 FOXD4L6Q3SYB3 417 aaPredicted RBP9.61□□□□□ -0.87
CUL3-208ENST00000454323 FOXD4L3Q6VB84 417 aaPredicted RBP9.61□□□□□ -0.87
CUL3-208ENST00000454323 STRN4Q9NRL3 753 aa9.61□□□□□ -0.87
CUL3-208ENST00000454323 HCN2Q9UL51 889 aa9.61□□□□□ -0.87
CUL3-208ENST00000454323 BTBD11A6QL63 1104 aa9.6□□□□□ -0.87
CUL3-208ENST00000454323 ADH7P40394 386 aa9.6□□□□□ -0.87
CUL3-208ENST00000454323 RAC1P63000 192 aa9.6□□□□□ -0.87
CUL3-208ENST00000454323 LCE3BQ5TA77 95 aa9.6□□□□□ -0.87
CUL3-208ENST00000454323 MICALL1Q8N3F8 863 aa9.6□□□□□ -0.87
CUL3-208ENST00000454323 LILRB5O75023 590 aa9.59□□□□□ -0.87
CUL3-208ENST00000454323 ELNP15502 786 aa9.59□□□□□ -0.87
CUL3-208ENST00000454323 TEAD4Q15561 434 aa9.59□□□□□ -0.87
CUL3-208ENST00000454323 EML3Q32P44 896 aa9.59□□□□□ -0.87
CUL3-208ENST00000454323 ANKIB1Q9P2G1 1089 aa9.59□□□□□ -0.87
CUL3-208ENST00000454323 CHMP3Q9Y3E7 222 aa9.59□□□□□ -0.87
CUL3-208ENST00000454323 TRAPPC3LQ5T215 181 aa9.58□□□□□ -0.88
CUL3-208ENST00000454323 LRRC69Q6ZNQ3 347 aa9.58□□□□□ -0.88
CUL3-208ENST00000454323 TXNRD3Q86VQ6 643 aa9.58□□□□□ -0.88
CUL3-208ENST00000454323 L3MBTL2Q969R5 705 aa9.58□□□□□ -0.88
CUL3-208ENST00000454323 SCHIP1Q9P0W5 487 aaPredicted RBP9.58□□□□□ -0.88
CUL3-208ENST00000454323 NOD1Q9Y239 953 aa9.58□□□□□ -0.88
CUL3-208ENST00000454323 FAM229AH3BQW9 127 aa9.57□□□□□ -0.88
CUL3-208ENST00000454323 ALBP02768 609 aa9.57□□□□□ -0.88
CUL3-208ENST00000454323 NID1P14543 1247 aa9.57□□□□□ -0.88
CUL3-208ENST00000454323 SPEM2Q0P670 501 aa9.57□□□□□ -0.88
CUL3-208ENST00000454323 ADGRE1Q14246 886 aa9.57□□□□□ -0.88
CUL3-208ENST00000454323 EFCC1Q9HA90 598 aa9.57□□□□□ -0.88
CUL3-208ENST00000454323 EML1O00423 815 aa9.56□□□□□ -0.88
CUL3-208ENST00000454323 NOS2P35228 1153 aa9.56□□□□□ -0.88
CUL3-208ENST00000454323 IRF5Q13568 498 aa9.56□□□□□ -0.88
CUL3-208ENST00000454323 GRIK4Q16099 956 aa9.56□□□□□ -0.88
CUL3-208ENST00000454323 ZNF232Q9UNY5 417 aa9.56□□□□□ -0.88
CUL3-208ENST00000454323 TXLNAP40222 546 aa9.55□□□□□ -0.88
CUL3-208ENST00000454323 PSME1Q06323 249 aa9.55□□□□□ -0.88
CUL3-208ENST00000454323 VAC14Q08AM6 782 aa9.55□□□□□ -0.88
CUL3-208ENST00000454323 COL9A3Q14050 684 aaPredicted RBP9.55□□□□□ -0.88
CUL3-208ENST00000454323 MBTPS1Q14703 1052 aa9.55□□□□□ -0.88
CUL3-208ENST00000454323 RHPN1Q8TCX5 695 aa9.55□□□□□ -0.88
CUL3-208ENST00000454323 STARD13Q9Y3M8 1113 aa9.55□□□□□ -0.88
CUL3-208ENST00000454323 LENG1Q96BZ8 264 aaPredicted RBP9.54□□□□□ -0.88
CUL3-208ENST00000454323 KRTAP4-12Q9BQ66 201 aa9.54□□□□□ -0.88
CUL3-208ENST00000454323 PARP3Q9Y6F1 533 aa9.54□□□□□ -0.88
CUL3-208ENST00000454323 SERTM1A2A2V5 107 aa9.53□□□□□ -0.88
CUL3-208ENST00000454323 SUPT5HO00267 1087 aaKnown RBP9.53□□□□□ -0.88
CUL3-208ENST00000454323 HIF1AQ16665 826 aa9.53□□□□□ -0.88
CUL3-208ENST00000454323 PCDHGA11Q9Y5H2 935 aa9.53□□□□□ -0.88
CUL3-208ENST00000454323 USP3Q9Y6I4 520 aa9.53□□□□□ -0.88
CUL3-208ENST00000454323 KCNQ4P56696 695 aa9.52□□□□□ -0.89
CUL3-208ENST00000454323 C1orf53Q5VUE5 145 aa9.52□□□□□ -0.89
CUL3-208ENST00000454323 SLC30A3Q99726 388 aa9.52□□□□□ -0.89
CUL3-208ENST00000454323 BRD7Q9NPI1 651 aa9.52□□□□□ -0.89
CUL3-208ENST00000454323 GTF2IP78347 998 aa9.51□□□□□ -0.89
CUL3-208ENST00000454323 SFSWAPQ12872 951 aaKnown RBP9.51□□□□□ -0.89
CUL3-208ENST00000454323 C20orf204Q6ZNR8 217 aa9.51□□□□□ -0.89
CUL3-208ENST00000454323 CEP63Q96MT8 703 aa9.51□□□□□ -0.89
CUL3-208ENST00000454323 ZNF358Q9NW07 568 aa9.51□□□□□ -0.89
CUL3-208ENST00000454323 KCNH4Q9UQ05 1017 aa9.51□□□□□ -0.89
CUL3-208ENST00000454323 A0A0A0MRY4 1105 aa9.5□□□□□ -0.89
CUL3-208ENST00000454323 HYAL3O43820 417 aaPredicted RBP9.5□□□□□ -0.89
CUL3-208ENST00000454323 NFATC2IPQ8NCF5 419 aa9.5□□□□□ -0.89
CUL3-208ENST00000454323 ZDHHC1Q8WTX9 485 aa9.5□□□□□ -0.89
CUL3-208ENST00000454323 TP53INP1Q96A56 240 aa9.5□□□□□ -0.89
CUL3-208ENST00000454323 USP21Q9UK80 565 aa9.5□□□□□ -0.89
CUL3-208ENST00000454323 ABL2P42684 1182 aa9.49□□□□□ -0.89
CUL3-208ENST00000454323 TRIM50Q86XT4 487 aa9.49□□□□□ -0.89
CUL3-208ENST00000454323 SLC9A9Q8IVB4 645 aa9.49□□□□□ -0.89
CUL3-208ENST00000454323 GOLGA2P5Q9HBQ8 144 aa9.49□□□□□ -0.89
CUL3-208ENST00000454323 SELPP16109 830 aa9.48□□□□□ -0.89
CUL3-208ENST00000454323 PSMA6P60900 246 aaKnown RBP9.48□□□□□ -0.89
CUL3-208ENST00000454323 C8orf86Q6ZUL3 223 aa9.48□□□□□ -0.89
CUL3-208ENST00000454323 UBE2OQ9C0C9 1292 aaKnown RBP9.48□□□□□ -0.89
CUL3-208ENST00000454323 JPH1Q9HDC5 661 aaPredicted RBP9.48□□□□□ -0.89
CUL3-208ENST00000454323 HIRAP54198 1017 aaPredicted RBP9.47□□□□□ -0.89
CUL3-208ENST00000454323 PCSK7Q16549 785 aa9.47□□□□□ -0.89
CUL3-208ENST00000454323 WWC1Q8IX03 1113 aa9.47□□□□□ -0.89
CUL3-208ENST00000454323 SKIP12755 728 aa9.46□□□□□ -0.9
CUL3-208ENST00000454323 SLC51AQ86UW1 340 aa9.46□□□□□ -0.9
CUL3-208ENST00000454323 DTWD1Q8N5C7 304 aa9.46□□□□□ -0.9
CUL3-208ENST00000454323 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.46□□□□□ -0.9
CUL3-208ENST00000454323 EPHA4P54764 986 aa9.45□□□□□ -0.9
CUL3-208ENST00000454323 BHMTQ93088 406 aa9.45□□□□□ -0.9
CUL3-208ENST00000454323 GDPD2Q9HCC8 539 aa9.45□□□□□ -0.9
CUL3-208ENST00000454323 RNF112Q9ULX5 631 aa9.45□□□□□ -0.9
CUL3-208ENST00000454323 ATP1A2P50993 1020 aa9.44□□□□□ -0.9
CUL3-208ENST00000454323 TYRO3Q06418 890 aa9.44□□□□□ -0.9
CUL3-208ENST00000454323 TBC1D8BQ0IIM8 1120 aa9.44□□□□□ -0.9
CUL3-208ENST00000454323 FMR1NBQ8N0W7 255 aaPredicted RBP9.44□□□□□ -0.9
CUL3-208ENST00000454323 SLC6A14Q9UN76 642 aa9.44□□□□□ -0.9
CUL3-208ENST00000454323 RAB44Q7Z6P3 723 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms