RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 KRT24Q2M2I5 525 aa19.05■□□□□ 0.64
HSPG2-207ENST00000453796 CFAP44Q96MT7 982 aa19.05■□□□□ 0.64
HSPG2-207ENST00000453796 SBF1O95248 1867 aa19.05■□□□□ 0.64
HSPG2-207ENST00000453796 ERVV-1B6SEH8 477 aa19.04■□□□□ 0.64
HSPG2-207ENST00000453796 MYL6BP14649 208 aa19.04■□□□□ 0.64
HSPG2-207ENST00000453796 TTLL7Q6ZT98 887 aa19.04■□□□□ 0.64
HSPG2-207ENST00000453796 ARFGEF2Q9Y6D5 1785 aa19.04■□□□□ 0.64
HSPG2-207ENST00000453796 MAP3K15Q6ZN16 1313 aa19.03■□□□□ 0.64
HSPG2-207ENST00000453796 CACNA1SQ13698 1873 aa19.03■□□□□ 0.64
HSPG2-207ENST00000453796 DALRD3Q5D0E6 543 aaKnown RBP19.03■□□□□ 0.64
HSPG2-207ENST00000453796 NGEFQ8N5V2 710 aa19.03■□□□□ 0.64
HSPG2-207ENST00000453796 BRIP1Q9BX63 1249 aa19.03■□□□□ 0.64
HSPG2-207ENST00000453796 MRS2Q9HD23 443 aa19.03■□□□□ 0.64
HSPG2-207ENST00000453796 LAS1LQ9Y4W2 734 aaKnown RBP19.03■□□□□ 0.64
HSPG2-207ENST00000453796 ATP10DQ9P241 1426 aa19.02■□□□□ 0.64
HSPG2-207ENST00000453796 ANKRD36CQ5JPF3 1778 aa19.02■□□□□ 0.64
HSPG2-207ENST00000453796 EIF2S2P20042 333 aaKnown RBP19.02■□□□□ 0.64
HSPG2-207ENST00000453796 CCDC24Q8N4L8 307 aa19.02■□□□□ 0.64
HSPG2-207ENST00000453796 CNBD1Q8NA66 436 aa19.02■□□□□ 0.64
HSPG2-207ENST00000453796 PROSER3Q2NL68 480 aa19.01■□□□□ 0.63
HSPG2-207ENST00000453796 C2CD5Q86YS7 1000 aa19.01■□□□□ 0.63
HSPG2-207ENST00000453796 MBIPQ9NS73 344 aa19.01■□□□□ 0.63
HSPG2-207ENST00000453796 NIP7Q9Y221 180 aaKnown RBP eCLIP19.01■□□□□ 0.63
HSPG2-207ENST00000453796 H0YIN7 160 aa19■□□□□ 0.63
HSPG2-207ENST00000453796 ANXA1P04083 346 aa19■□□□□ 0.63
HSPG2-207ENST00000453796 HOXB7P09629 217 aa19■□□□□ 0.63
HSPG2-207ENST00000453796 PDE6BP35913 854 aa19■□□□□ 0.63
HSPG2-207ENST00000453796 IFT57Q9NWB7 429 aa19■□□□□ 0.63
HSPG2-207ENST00000453796 PDZRN3Q9UPQ7 1066 aa19■□□□□ 0.63
HSPG2-207ENST00000453796 KIF6Q6ZMV9 814 aa18.99■□□□□ 0.63
HSPG2-207ENST00000453796 NBPF5PQ86XG9 351 aaPredicted RBP18.99■□□□□ 0.63
HSPG2-207ENST00000453796 SLX4Q8IY92 1834 aa18.99■□□□□ 0.63
HSPG2-207ENST00000453796 CCDC88AQ3V6T2 1871 aa18.99■□□□□ 0.63
HSPG2-207ENST00000453796 TNRC6CQ9HCJ0 1690 aaKnown RBP18.98■□□□□ 0.63
HSPG2-207ENST00000453796 GNAI1P63096 354 aa18.98■□□□□ 0.63
HSPG2-207ENST00000453796 ST5P78524 1137 aa18.98■□□□□ 0.63
HSPG2-207ENST00000453796 CALD1Q05682 793 aaKnown RBP18.98■□□□□ 0.63
HSPG2-207ENST00000453796 CCDC27Q2M243 656 aa18.98■□□□□ 0.63
HSPG2-207ENST00000453796 GIGYF2Q6Y7W6 1299 aaKnown RBP18.98■□□□□ 0.63
HSPG2-207ENST00000453796 ARHGAP27Q6ZUM4 889 aa18.98■□□□□ 0.63
HSPG2-207ENST00000453796 TTLL6Q8N841 843 aa18.98■□□□□ 0.63
HSPG2-207ENST00000453796 NECTIN2Q92692 538 aa18.98■□□□□ 0.63
HSPG2-207ENST00000453796 ZBTB3Q9H5J0 574 aa18.98■□□□□ 0.63
HSPG2-207ENST00000453796 DDX21Q9NR30 783 aaKnown RBP eCLIP18.98■□□□□ 0.63
HSPG2-207ENST00000453796 FER1L6Q2WGJ9 1857 aa18.98■□□□□ 0.63
HSPG2-207ENST00000453796 NCBP3Q53F19 620 aaKnown RBP18.97■□□□□ 0.63
HSPG2-207ENST00000453796 UBN2Q6ZU65 1347 aa18.97■□□□□ 0.63
HSPG2-207ENST00000453796 IBTKQ9P2D0 1353 aaPredicted RBP18.96■□□□□ 0.63
HSPG2-207ENST00000453796 KLRG2A4D1S0 409 aaPredicted RBP18.96■□□□□ 0.63
HSPG2-207ENST00000453796 SRGNP10124 158 aa18.96■□□□□ 0.63
HSPG2-207ENST00000453796 DUSP27Q5VZP5 1158 aa18.96■□□□□ 0.63
HSPG2-207ENST00000453796 TPTE2Q6XPS3 522 aa18.96■□□□□ 0.63
HSPG2-207ENST00000453796 ZNF34Q8IZ26 560 aa18.96■□□□□ 0.63
HSPG2-207ENST00000453796 NPHP1O15259 732 aa18.95■□□□□ 0.62
HSPG2-207ENST00000453796 HDGFL1Q5TGJ6 251 aa18.95■□□□□ 0.62
HSPG2-207ENST00000453796 WWC1Q8IX03 1113 aa18.95■□□□□ 0.62
HSPG2-207ENST00000453796 CHPF2Q9P2E5 772 aa18.95■□□□□ 0.62
HSPG2-207ENST00000453796 RIC1Q4ADV7 1423 aa18.94■□□□□ 0.62
HSPG2-207ENST00000453796 FAM177BA6PVY3 158 aa18.94■□□□□ 0.62
HSPG2-207ENST00000453796 COPS6Q7L5N1 327 aa18.94■□□□□ 0.62
HSPG2-207ENST00000453796 XAGE3Q8WTP9 111 aa18.94■□□□□ 0.62
HSPG2-207ENST00000453796 ABCC12Q96J65 1359 aa18.93■□□□□ 0.62
HSPG2-207ENST00000453796 SENP3-EIF4A1A0A087X0R7 540 aa18.93■□□□□ 0.62
HSPG2-207ENST00000453796 GPTP24298 496 aa18.93■□□□□ 0.62
HSPG2-207ENST00000453796 STYK1Q6J9G0 422 aa18.93■□□□□ 0.62
HSPG2-207ENST00000453796 ZNF622Q969S3 477 aaKnown RBP eCLIP18.93■□□□□ 0.62
HSPG2-207ENST00000453796 MASTLQ96GX5 879 aa18.93■□□□□ 0.62
HSPG2-207ENST00000453796 NYXQ9GZU5 481 aa18.93■□□□□ 0.62
HSPG2-207ENST00000453796 DICER1Q9UPY3 1922 aaKnown RBP18.93■□□□□ 0.62
HSPG2-207ENST00000453796 SUSD4Q5VX71 490 aa18.92■□□□□ 0.62
HSPG2-207ENST00000453796 DBF4Q9UBU7 674 aaPredicted RBP18.92■□□□□ 0.62
HSPG2-207ENST00000453796 LAMB2P55268 1798 aa18.91■□□□□ 0.62
HSPG2-207ENST00000453796 NTSR2O95665 410 aa18.91■□□□□ 0.62
HSPG2-207ENST00000453796 AIMP1Q12904 312 aaKnown RBP18.91■□□□□ 0.62
HSPG2-207ENST00000453796 NUTM1Q86Y26 1132 aa18.91■□□□□ 0.62
HSPG2-207ENST00000453796 C8orf58Q8NAV2 365 aa18.91■□□□□ 0.62
HSPG2-207ENST00000453796 CNKSR1Q969H4 720 aa18.91■□□□□ 0.62
HSPG2-207ENST00000453796 PRELPP51888 382 aa18.9■□□□□ 0.62
HSPG2-207ENST00000453796 RASSF7Q02833 373 aa18.9■□□□□ 0.62
HSPG2-207ENST00000453796 ERFEQ4G0M1 354 aa18.9■□□□□ 0.62
HSPG2-207ENST00000453796 C9orf131Q5VYM1 1079 aa18.9■□□□□ 0.62
HSPG2-207ENST00000453796 IL16Q14005 1332 aa18.9■□□□□ 0.62
HSPG2-207ENST00000453796 TIAM2Q8IVF5 1701 aa18.89■□□□□ 0.61
HSPG2-207ENST00000453796 NFKBIEO00221 500 aa18.89■□□□□ 0.61
HSPG2-207ENST00000453796 NPR1P16066 1061 aa18.89■□□□□ 0.61
HSPG2-207ENST00000453796 CRY2Q49AN0 593 aa18.89■□□□□ 0.61
HSPG2-207ENST00000453796 PARP10Q53GL7 1025 aa18.89■□□□□ 0.61
HSPG2-207ENST00000453796 PRPF40BQ6NWY9 871 aaKnown RBP18.89■□□□□ 0.61
HSPG2-207ENST00000453796 ELL2O00472 640 aaPredicted RBP18.88■□□□□ 0.61
HSPG2-207ENST00000453796 C21orf2O43822 256 aa18.88■□□□□ 0.61
HSPG2-207ENST00000453796 GTF2E1P29083 439 aaPredicted RBP18.88■□□□□ 0.61
HSPG2-207ENST00000453796 TCIRG1Q13488 830 aa18.88■□□□□ 0.61
HSPG2-207ENST00000453796 TSPYL6Q8N831 410 aa18.88■□□□□ 0.61
HSPG2-207ENST00000453796 C7orf43Q8WVR3 580 aa18.88■□□□□ 0.61
HSPG2-207ENST00000453796 TSR2Q969E8 191 aaKnown RBP18.88■□□□□ 0.61
HSPG2-207ENST00000453796 HYPKQ9NX55 129 aa18.88■□□□□ 0.61
HSPG2-207ENST00000453796 HSP90AB3PQ58FF7 597 aa18.87■□□□□ 0.61
HSPG2-207ENST00000453796 PPP1R42Q7Z4L9 355 aa18.87■□□□□ 0.61
HSPG2-207ENST00000453796 FAM9BQ8IZU0 186 aa18.87■□□□□ 0.61
HSPG2-207ENST00000453796 PLBD2Q8NHP8 589 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms