RNA–Protein interactions for RNA: ENST00000453135.1

LINC01647-201, Transcript of long intergenic non-protein coding RNA 1647, humanhuman

TSL 1 (best) BASIC

Gene LINC01647, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01647-201ENST00000453135 SMIM5Q71RC9 77 aa11.25□□□□□ -0.61
LINC01647-201ENST00000453135 NPM2Q86SE8 214 aaKnown RBP11.25□□□□□ -0.61
LINC01647-201ENST00000453135 IFNL1Q8IU54 200 aa11.25□□□□□ -0.61
LINC01647-201ENST00000453135 C8orf58Q8NAV2 365 aa11.25□□□□□ -0.61
LINC01647-201ENST00000453135 TJP1Q07157 1748 aa11.25□□□□□ -0.61
LINC01647-201ENST00000453135 PNPLA7Q6ZV29 1317 aa11.25□□□□□ -0.61
LINC01647-201ENST00000453135 CICQ96RK0 1608 aaPredicted RBP11.24□□□□□ -0.61
LINC01647-201ENST00000453135 IL6STP40189 918 aaPredicted RBP11.24□□□□□ -0.61
LINC01647-201ENST00000453135 EXOSC9Q06265 439 aaKnown RBP11.24□□□□□ -0.61
LINC01647-201ENST00000453135 HDGFL1Q5TGJ6 251 aa11.24□□□□□ -0.61
LINC01647-201ENST00000453135 AMIGO3Q86WK7 504 aa11.24□□□□□ -0.61
LINC01647-201ENST00000453135 COL23A1Q86Y22 540 aaPredicted RBP11.24□□□□□ -0.61
LINC01647-201ENST00000453135 TSPYL6Q8N831 410 aa11.24□□□□□ -0.61
LINC01647-201ENST00000453135 NECTIN2Q92692 538 aa11.24□□□□□ -0.61
LINC01647-201ENST00000453135 CDCA7LQ96GN5 454 aa11.24□□□□□ -0.61
LINC01647-201ENST00000453135 CHMP4AQ9BY43 222 aa11.24□□□□□ -0.61
LINC01647-201ENST00000453135 SOS1Q07889 1333 aaPredicted RBP11.24□□□□□ -0.61
LINC01647-201ENST00000453135 ZBED9Q6R2W3 1325 aa11.24□□□□□ -0.61
LINC01647-201ENST00000453135 A0A087WZG4 1122 aa11.23□□□□□ -0.61
LINC01647-201ENST00000453135 RFC4P35249 363 aa11.23□□□□□ -0.61
LINC01647-201ENST00000453135 PIP4K2AP48426 406 aaPredicted RBP11.23□□□□□ -0.61
LINC01647-201ENST00000453135 EIF5P55010 431 aaKnown RBP11.23□□□□□ -0.61
LINC01647-201ENST00000453135 TWISTNBQ3B726 338 aaPredicted RBP11.23□□□□□ -0.61
LINC01647-201ENST00000453135 ARHGEF1Q92888 912 aaKnown RBP11.23□□□□□ -0.61
LINC01647-201ENST00000453135 MS4A3Q96HJ5 214 aa11.23□□□□□ -0.61
LINC01647-201ENST00000453135 PDGFDQ9GZP0 370 aaPredicted RBP11.23□□□□□ -0.61
LINC01647-201ENST00000453135 ZNF330Q9Y3S2 320 aaPredicted RBP11.23□□□□□ -0.61
LINC01647-201ENST00000453135 ERBB4Q15303 1308 aa11.23□□□□□ -0.61
LINC01647-201ENST00000453135 COL5A3P25940 1745 aaPredicted RBP11.23□□□□□ -0.61
LINC01647-201ENST00000453135 NBPF26B4DH59 902 aa11.22□□□□□ -0.61
LINC01647-201ENST00000453135 NBPF10Q6P3W6 841 aaKnown RBP11.22□□□□□ -0.61
LINC01647-201ENST00000453135 MYH14Q7Z406 1995 aaKnown RBP11.22□□□□□ -0.61
LINC01647-201ENST00000453135 TRMT2AQ8IZ69 625 aaKnown RBP11.22□□□□□ -0.61
LINC01647-201ENST00000453135 NBPF15Q8N660 670 aa11.22□□□□□ -0.61
LINC01647-201ENST00000453135 SLC16A10Q8TF71 515 aa11.22□□□□□ -0.61
LINC01647-201ENST00000453135 COL15A1P39059 1388 aa11.21□□□□□ -0.61
LINC01647-201ENST00000453135 ZPR1O75312 459 aa11.21□□□□□ -0.61
LINC01647-201ENST00000453135 VAMP4O75379 141 aa11.21□□□□□ -0.61
LINC01647-201ENST00000453135 MYL6BP14649 208 aa11.21□□□□□ -0.61
LINC01647-201ENST00000453135 CCDC30Q5VVM6 783 aa11.21□□□□□ -0.61
LINC01647-201ENST00000453135 ZNF467Q7Z7K2 595 aaPredicted RBP11.21□□□□□ -0.61
LINC01647-201ENST00000453135 ARXQ96QS3 562 aa11.21□□□□□ -0.61
LINC01647-201ENST00000453135 DDX21Q9NR30 783 aaKnown RBP eCLIP11.21□□□□□ -0.61
LINC01647-201ENST00000453135 DBF4Q9UBU7 674 aaPredicted RBP11.21□□□□□ -0.61
LINC01647-201ENST00000453135 ZBTB7AO95365 584 aa11.2□□□□□ -0.62
LINC01647-201ENST00000453135 ANXA1P04083 346 aa11.2□□□□□ -0.62
LINC01647-201ENST00000453135 PDIA6Q15084 440 aa11.2□□□□□ -0.62
LINC01647-201ENST00000453135 SGIP1Q9BQI5 828 aa11.2□□□□□ -0.62
LINC01647-201ENST00000453135 CHPF2Q9P2E5 772 aa11.2□□□□□ -0.62
LINC01647-201ENST00000453135 NARFQ9UHQ1 456 aa11.2□□□□□ -0.62
LINC01647-201ENST00000453135 TBC1D2BQ9UPU7 963 aa11.2□□□□□ -0.62
LINC01647-201ENST00000453135 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
LINC01647-201ENST00000453135 UBR3Q6ZT12 1888 aa11.19□□□□□ -0.62
LINC01647-201ENST00000453135 PROSER3Q2NL68 480 aa11.19□□□□□ -0.62
LINC01647-201ENST00000453135 USPL1Q5W0Q7 1092 aa11.19□□□□□ -0.62
LINC01647-201ENST00000453135 DZIP3Q86Y13 1208 aaKnown RBP11.19□□□□□ -0.62
LINC01647-201ENST00000453135 YTHDC1Q96MU7 727 aaKnown RBP11.19□□□□□ -0.62
LINC01647-201ENST00000453135 STK31Q9BXU1 1019 aa11.19□□□□□ -0.62
LINC01647-201ENST00000453135 MTFR1LQ9H019 292 aa11.19□□□□□ -0.62
LINC01647-201ENST00000453135 HYPKQ9NX55 129 aa11.19□□□□□ -0.62
LINC01647-201ENST00000453135 SRP68Q9UHB9 627 aaKnown RBP11.19□□□□□ -0.62
LINC01647-201ENST00000453135 LAMB4A4D0S4 1761 aa11.18□□□□□ -0.62
LINC01647-201ENST00000453135 QSER1Q2KHR3 1735 aa11.18□□□□□ -0.62
LINC01647-201ENST00000453135 USP42Q9H9J4 1324 aaKnown RBP11.18□□□□□ -0.62
LINC01647-201ENST00000453135 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.18□□□□□ -0.62
LINC01647-201ENST00000453135 GALR2O43603 387 aaPredicted RBP11.18□□□□□ -0.62
LINC01647-201ENST00000453135 GYS1P13807 737 aa11.18□□□□□ -0.62
LINC01647-201ENST00000453135 NLGN1Q8N2Q7 840 aa11.18□□□□□ -0.62
LINC01647-201ENST00000453135 ZFP91Q96JP5 570 aaPredicted RBP11.18□□□□□ -0.62
LINC01647-201ENST00000453135 SPON1Q9HCB6 807 aa11.18□□□□□ -0.62
LINC01647-201ENST00000453135 TUBGCP6Q96RT7 1819 aa11.18□□□□□ -0.62
LINC01647-201ENST00000453135 TCERG1O14776 1098 aaKnown RBP11.17□□□□□ -0.62
LINC01647-201ENST00000453135 CAMTA2O94983 1202 aa11.17□□□□□ -0.62
LINC01647-201ENST00000453135 CT47B1P0C2W7 299 aaPredicted RBP11.17□□□□□ -0.62
LINC01647-201ENST00000453135 AIMP1Q12904 312 aaKnown RBP11.17□□□□□ -0.62
LINC01647-201ENST00000453135 MSL1Q68DK7 614 aa11.17□□□□□ -0.62
LINC01647-201ENST00000453135 KIF6Q6ZMV9 814 aa11.17□□□□□ -0.62
LINC01647-201ENST00000453135 TTLL7Q6ZT98 887 aa11.17□□□□□ -0.62
LINC01647-201ENST00000453135 COPS6Q7L5N1 327 aa11.17□□□□□ -0.62
LINC01647-201ENST00000453135 LRP10Q7Z4F1 713 aa11.17□□□□□ -0.62
LINC01647-201ENST00000453135 XAGE3Q8WTP9 111 aa11.17□□□□□ -0.62
LINC01647-201ENST00000453135 SRCAPQ6ZRS2 3230 aa11.16□□□□□ -0.62
LINC01647-201ENST00000453135 POLD1P28340 1107 aa11.16□□□□□ -0.62
LINC01647-201ENST00000453135 ZNF428Q96B54 188 aa11.16□□□□□ -0.62
LINC01647-201ENST00000453135 CASZ1Q86V15 1759 aa11.16□□□□□ -0.62
LINC01647-201ENST00000453135 MAP3K15Q6ZN16 1313 aa11.15□□□□□ -0.62
LINC01647-201ENST00000453135 ERVV-1B6SEH8 477 aa11.15□□□□□ -0.62
LINC01647-201ENST00000453135 CLEC4GQ6UXB4 293 aa11.15□□□□□ -0.62
LINC01647-201ENST00000453135 ZBTB3Q9H5J0 574 aa11.15□□□□□ -0.62
LINC01647-201ENST00000453135 PHAXQ9H814 394 aaKnown RBP11.15□□□□□ -0.62
LINC01647-201ENST00000453135 BCL2L12Q9HB09 334 aa11.15□□□□□ -0.62
LINC01647-201ENST00000453135 ZNF652Q9Y2D9 606 aa11.15□□□□□ -0.62
LINC01647-201ENST00000453135 PDAP1Q13442 181 aaKnown RBP11.14□□□□□ -0.63
LINC01647-201ENST00000453135 HLFQ16534 295 aa11.14□□□□□ -0.63
LINC01647-201ENST00000453135 ALDH1L2Q3SY69 923 aa11.14□□□□□ -0.63
LINC01647-201ENST00000453135 ANKRD13DQ6ZTN6 518 aa11.14□□□□□ -0.63
LINC01647-201ENST00000453135 HS6ST3Q8IZP7 471 aa11.14□□□□□ -0.63
LINC01647-201ENST00000453135 DDX58O95786 925 aaKnown RBP11.13□□□□□ -0.63
LINC01647-201ENST00000453135 MMP10P09238 476 aa11.13□□□□□ -0.63
LINC01647-201ENST00000453135 TM4SF1P30408 202 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms