RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 SMARCA5O60264 1052 aaPredicted RBP9.84□□□□□ -0.83
SMCO1-202ENST00000452776 EIF3JO75822 258 aaKnown RBP9.84□□□□□ -0.83
SMCO1-202ENST00000452776 F13A1P00488 732 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 LIG1P18858 919 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 SDSP20132 328 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 MAP2K1Q02750 393 aaPredicted RBP9.84□□□□□ -0.83
SMCO1-202ENST00000452776 LRMPQ12912 555 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 ERCC6LQ2NKX8 1250 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 LRCH2Q5VUJ6 765 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 EIF3CQ99613 913 aaKnown RBP9.84□□□□□ -0.83
SMCO1-202ENST00000452776 TMX1Q9H3N1 280 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 TOMM22Q9NS69 142 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 PHLPP2Q6ZVD8 1323 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 IQGAP1P46940 1657 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 TOPBP1Q92547 1522 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 GOLIM4O00461 696 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 TUBBP07437 444 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 GYS2P54840 703 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 PACS2Q86VP3 889 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 DDX11Q96FC9 970 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 CBX8Q9HC52 389 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 A1CFQ9NQ94 594 aaKnown RBP9.83□□□□□ -0.84
SMCO1-202ENST00000452776 LCMT1Q9UIC8 334 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 CNPY2Q9Y2B0 182 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 MRVI1Q9Y6F6 885 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 IQGAP2Q13576 1575 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 ADCY10Q96PN6 1610 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 FAM135BQ49AJ0 1406 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 ZNF518AQ6AHZ1 1483 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 IFT140Q96RY7 1462 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 FANCD2Q9BXW9 1451 aa9.83□□□□□ -0.84
SMCO1-202ENST00000452776 POTEB2H3BUK9 544 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 LMAN1P49257 510 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 POTEGQ6S5H5 508 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 RBM43Q6ZSC3 357 aaKnown RBP9.82□□□□□ -0.84
SMCO1-202ENST00000452776 TBC1D22AQ8WUA7 517 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 ACBD3Q9H3P7 528 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 ZNF777Q9ULD5 760 aaPredicted RBP9.82□□□□□ -0.84
SMCO1-202ENST00000452776 NSD2O96028 1365 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 AATKQ6ZMQ8 1374 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 PLA2R1Q13018 1463 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 TTC37Q6PGP7 1564 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 CTAGE5O15320 804 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 ST5P78524 1137 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 BRD3Q15059 726 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 LRRFIP1Q32MZ4 808 aaKnown RBP9.82□□□□□ -0.84
SMCO1-202ENST00000452776 TTLL5Q6EMB2 1281 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 REXO1L1PQ8IX06 675 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 CCDC150Q8NCX0 1101 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 ZSCAN31Q96LW9 406 aaPredicted RBP9.82□□□□□ -0.84
SMCO1-202ENST00000452776 TNMDQ9H2S6 317 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 GDPD2Q9HCC8 539 aa9.82□□□□□ -0.84
SMCO1-202ENST00000452776 GOLGA6L4A6NEF3 574 aa9.81□□□□□ -0.84
SMCO1-202ENST00000452776 TMCO5BA8MYB1 307 aa9.81□□□□□ -0.84
SMCO1-202ENST00000452776 U2AF1L5P0DN76 240 aaPredicted RBP9.81□□□□□ -0.84
SMCO1-202ENST00000452776 TMPOP42166 694 aaKnown RBP9.81□□□□□ -0.84
SMCO1-202ENST00000452776 ZNF165P49910 485 aa9.81□□□□□ -0.84
SMCO1-202ENST00000452776 U2AF1Q01081 240 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMCO1-202ENST00000452776 DNAJC21Q5F1R6 531 aaKnown RBP9.81□□□□□ -0.84
SMCO1-202ENST00000452776 NUTM1Q86Y26 1132 aa9.81□□□□□ -0.84
SMCO1-202ENST00000452776 PUS7Q96PZ0 661 aaKnown RBP9.81□□□□□ -0.84
SMCO1-202ENST00000452776 CARD14Q9BXL6 1004 aa9.81□□□□□ -0.84
SMCO1-202ENST00000452776 SCAND2PQ9GZW5 306 aaPredicted RBP9.81□□□□□ -0.84
SMCO1-202ENST00000452776 ZSCAN16Q9H4T2 348 aaPredicted RBP9.81□□□□□ -0.84
SMCO1-202ENST00000452776 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMCO1-202ENST00000452776 SMC3Q9UQE7 1217 aa9.81□□□□□ -0.84
SMCO1-202ENST00000452776 TTC41PQ6P2S7 1318 aa9.81□□□□□ -0.84
SMCO1-202ENST00000452776 PTCH1Q13635 1447 aa9.81□□□□□ -0.84
SMCO1-202ENST00000452776 ADGRB2O60241 1585 aa9.81□□□□□ -0.84
SMCO1-202ENST00000452776 PRR29P0C7W0 189 aa9.8□□□□□ -0.84
SMCO1-202ENST00000452776 KRT85P78386 507 aa9.8□□□□□ -0.84
SMCO1-202ENST00000452776 CC2D1AQ6P1N0 951 aaPredicted RBP9.8□□□□□ -0.84
SMCO1-202ENST00000452776 HNRNPLLQ8WVV9 542 aaKnown RBP9.8□□□□□ -0.84
SMCO1-202ENST00000452776 NRBP1Q9UHY1 535 aa9.8□□□□□ -0.84
SMCO1-202ENST00000452776 DNAI1Q9UI46 699 aa9.8□□□□□ -0.84
SMCO1-202ENST00000452776 SBNO2Q9Y2G9 1366 aa9.8□□□□□ -0.84
SMCO1-202ENST00000452776 TRAPPC8Q9Y2L5 1435 aa9.8□□□□□ -0.84
SMCO1-202ENST00000452776 ARHGEF5Q12774 1597 aa9.8□□□□□ -0.84
SMCO1-202ENST00000452776 SHPRHQ149N8 1683 aa9.8□□□□□ -0.84
SMCO1-202ENST00000452776 ABCC4O15439 1325 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 CCDC69A6NI79 296 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 C21orf2O43822 256 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 SMC2O95347 1197 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 ANO6Q4KMQ2 910 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 TADA2BQ86TJ2 420 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 LUZP1Q86V48 1076 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMCO1-202ENST00000452776 SIRT2Q8IXJ6 389 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 ANKRD44Q8N8A2 993 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 TSR2Q969E8 191 aaKnown RBP9.79□□□□□ -0.84
SMCO1-202ENST00000452776 CHAMP1Q96JM3 812 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 OSBPL5Q9H0X9 879 aaPredicted RBP9.79□□□□□ -0.84
SMCO1-202ENST00000452776 LIMCH1Q9UPQ0 1083 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 MYOM1P52179 1685 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 DUOX2Q9NRD8 1548 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 CCDC151A5D8V7 595 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 GOLGA6L9A6NEM1 432 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 HMMRO75330 724 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 PPFIA4O75335 1185 aa9.79□□□□□ -0.84
SMCO1-202ENST00000452776 ERLIN1O75477 346 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms