RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 ERCC5P28715 1186 aaPredicted RBP5.93□□□□□ -1.46
EPHA3-202ENST00000452448 TRPC1P48995 793 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 TRDNQ13061 729 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 JAKMIP3Q5VZ66 844 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 CC2D1AQ6P1N0 951 aaPredicted RBP5.93□□□□□ -1.46
EPHA3-202ENST00000452448 TAX1BP1Q86VP1 789 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 ZSCAN30Q86W11 494 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 ELOA2Q8IYF1 753 aaPredicted RBP5.93□□□□□ -1.46
EPHA3-202ENST00000452448 DHX38Q92620 1227 aaKnown RBP5.93□□□□□ -1.46
EPHA3-202ENST00000452448 KCNB2Q92953 911 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 PPP4R2Q9NY27 417 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 SWAP70Q9UH65 585 aa5.93□□□□□ -1.46
EPHA3-202ENST00000452448 MKRN1Q9UHC7 482 aaKnown RBP5.93□□□□□ -1.46
EPHA3-202ENST00000452448 INF2Q27J81 1249 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 TSNAXIP1Q2TAA8 658 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 SDE2Q6IQ49 451 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 VPS37AQ8NEZ2 397 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 PNISRQ8TF01 805 aaKnown RBP5.92□□□□□ -1.46
EPHA3-202ENST00000452448 DCBLD2Q96PD2 775 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 PIF1Q9H611 641 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 RABL2AQ9UBK7 228 aaPredicted RBP5.92□□□□□ -1.46
EPHA3-202ENST00000452448 PCDHGA4Q9Y5G9 962 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 SHROOM2Q13796 1616 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 KINO60870 393 aaKnown RBP5.92□□□□□ -1.46
EPHA3-202ENST00000452448 EIF3JO75822 258 aaKnown RBP5.92□□□□□ -1.46
EPHA3-202ENST00000452448 VDRP11473 427 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 PTGDRQ13258 359 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 CCDC144BQ3MJ40 725 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 CCDC91Q7Z6B0 441 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 CCDC146Q8IYE0 955 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 ARL10Q8N8L6 244 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 PRPF38AQ8NAV1 312 aaKnown RBP5.92□□□□□ -1.46
EPHA3-202ENST00000452448 LSM14AQ8ND56 463 aaKnown RBP5.92□□□□□ -1.46
EPHA3-202ENST00000452448 TBC1D22AQ8WUA7 517 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 SLX1AQ9BQ83 275 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 SENP7Q9BQF6 1050 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 TANGO6Q9C0B7 1094 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 ETAA1Q9NY74 926 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 G3BP2Q9UN86 482 aaKnown RBP5.92□□□□□ -1.46
EPHA3-202ENST00000452448 ITM2BQ9Y287 266 aa5.92□□□□□ -1.46
EPHA3-202ENST00000452448 GLI2P10070 1586 aa5.91□□□□□ -1.46
EPHA3-202ENST00000452448 POLA1P09884 1462 aaPredicted RBP5.91□□□□□ -1.46
EPHA3-202ENST00000452448 SHTN1A0MZ66 631 aa5.91□□□□□ -1.46
EPHA3-202ENST00000452448 C17orf50Q8WW18 174 aa5.91□□□□□ -1.46
EPHA3-202ENST00000452448 AGAP3Q96P47 875 aa5.91□□□□□ -1.46
EPHA3-202ENST00000452448 PCDHGA10Q9Y5H3 936 aa5.91□□□□□ -1.46
EPHA3-202ENST00000452448 TMCO5BA8MYB1 307 aa5.91□□□□□ -1.46
EPHA3-202ENST00000452448 GOLGA6L22H0YM25 854 aa5.91□□□□□ -1.46
EPHA3-202ENST00000452448 HTATSF1O43719 755 aaKnown RBP5.91□□□□□ -1.46
EPHA3-202ENST00000452448 TCEAL1Q15170 157 aa5.91□□□□□ -1.46
EPHA3-202ENST00000452448 CLASRPQ8N2M8 674 aaKnown RBP5.91□□□□□ -1.46
EPHA3-202ENST00000452448 MTMR14Q8NCE2 650 aa5.91□□□□□ -1.46
EPHA3-202ENST00000452448 TDRD7Q8NHU6 1098 aaKnown RBP5.91□□□□□ -1.46
EPHA3-202ENST00000452448 TMOD4Q9NZQ9 345 aa5.91□□□□□ -1.46
EPHA3-202ENST00000452448 R3HCC1Q9Y3T6 440 aaKnown RBP5.91□□□□□ -1.46
EPHA3-202ENST00000452448 CUX1P39880 1505 aa5.91□□□□□ -1.46
EPHA3-202ENST00000452448 TEX14Q8IWB6 1497 aa5.91□□□□□ -1.46
EPHA3-202ENST00000452448 NUP160Q12769 1436 aa5.91□□□□□ -1.46
EPHA3-202ENST00000452448 BICDL2A1A5D9 508 aa5.9□□□□□ -1.46
EPHA3-202ENST00000452448 FSD2A1L4K1 749 aa5.9□□□□□ -1.46
EPHA3-202ENST00000452448 TRIM64CA6NLI5 447 aa5.9□□□□□ -1.46
EPHA3-202ENST00000452448 XRCC6P12956 609 aaKnown RBP eCLIP5.9□□□□□ -1.46
EPHA3-202ENST00000452448 SLC7A5Q01650 507 aa5.9□□□□□ -1.46
EPHA3-202ENST00000452448 NEK9Q8TD19 979 aa5.9□□□□□ -1.46
EPHA3-202ENST00000452448 CDC5LQ99459 802 aaKnown RBP5.9□□□□□ -1.46
EPHA3-202ENST00000452448 POLR3CQ9BUI4 534 aaPredicted RBP5.9□□□□□ -1.46
EPHA3-202ENST00000452448 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.9□□□□□ -1.46
EPHA3-202ENST00000452448 SPATA31D1Q6ZQQ2 1576 aa5.9□□□□□ -1.46
EPHA3-202ENST00000452448 CEP170Q5SW79 1584 aa5.9□□□□□ -1.47
EPHA3-202ENST00000452448 GOLGA6L6A8MZA4 724 aa5.9□□□□□ -1.47
EPHA3-202ENST00000452448 CCDC92Q53HC0 331 aaPredicted RBP5.9□□□□□ -1.47
EPHA3-202ENST00000452448 ANKRD13BQ86YJ7 626 aa5.9□□□□□ -1.47
EPHA3-202ENST00000452448 SAMD3Q8N6K7 520 aa5.9□□□□□ -1.47
EPHA3-202ENST00000452448 MUC3BQ9H195 1237 aa5.9□□□□□ -1.47
EPHA3-202ENST00000452448 PRR12Q9ULL5 1215 aa5.9□□□□□ -1.47
EPHA3-202ENST00000452448 TBC1D2BQ9UPU7 963 aa5.9□□□□□ -1.47
EPHA3-202ENST00000452448 THRAP3Q9Y2W1 955 aaKnown RBP5.9□□□□□ -1.47
EPHA3-202ENST00000452448 TBX22Q9Y458 520 aa5.9□□□□□ -1.47
EPHA3-202ENST00000452448 ARHGAP35Q9NRY4 1499 aa5.9□□□□□ -1.47
EPHA3-202ENST00000452448 RBAK-RBAKDNI3L0D1 243 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 GIGYF1O75420 1035 aaPredicted RBP5.89□□□□□ -1.47
EPHA3-202ENST00000452448 TPPPO94811 219 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 NUDT7P0C024 238 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 C7P10643 843 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 GABPB1Q06547 395 aaPredicted RBP5.89□□□□□ -1.47
EPHA3-202ENST00000452448 ATP2B3Q16720 1220 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 LONRF1Q17RB8 773 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 TBC1D10BQ4KMP7 808 aaPredicted RBP5.89□□□□□ -1.47
EPHA3-202ENST00000452448 KLHL10Q6JEL2 608 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 NFXL1Q6ZNB6 911 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 STAG2Q8N3U4 1231 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 TRIML1Q8N9V2 468 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 RPS6KC1Q96S38 1066 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 RASSF4Q9H2L5 321 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 MKS1Q9NXB0 559 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 USP25Q9UHP3 1055 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 RRM1P23921 792 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 ATICP31939 592 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 ATP6V1AP38606 617 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 FXNQ16595 210 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms