RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 MYL6BP14649 208 aa21■□□□□ 0.95
SCAMP4-205ENST00000452128 CHRNA5P30532 468 aa21■□□□□ 0.95
SCAMP4-205ENST00000452128 DUSP27Q5VZP5 1158 aa21■□□□□ 0.95
SCAMP4-205ENST00000452128 NPM2Q86SE8 214 aaKnown RBP21■□□□□ 0.95
SCAMP4-205ENST00000452128 DDX21Q9NR30 783 aaKnown RBP eCLIP21■□□□□ 0.95
SCAMP4-205ENST00000452128 IL16Q14005 1332 aa21■□□□□ 0.95
SCAMP4-205ENST00000452128 ANXA1P04083 346 aa20.99■□□□□ 0.95
SCAMP4-205ENST00000452128 YY1P25490 414 aa20.99■□□□□ 0.95
SCAMP4-205ENST00000452128 NGEFQ8N5V2 710 aa20.99■□□□□ 0.95
SCAMP4-205ENST00000452128 C8orf58Q8NAV2 365 aa20.99■□□□□ 0.95
SCAMP4-205ENST00000452128 BRIP1Q9BX63 1249 aa20.99■□□□□ 0.95
SCAMP4-205ENST00000452128 PELP1Q8IZL8 1130 aaKnown RBP20.98■□□□□ 0.95
SCAMP4-205ENST00000452128 ZNF652Q9Y2D9 606 aa20.98■□□□□ 0.95
SCAMP4-205ENST00000452128 KLRG2A4D1S0 409 aaPredicted RBP20.97■□□□□ 0.95
SCAMP4-205ENST00000452128 ZNF34Q8IZ26 560 aa20.97■□□□□ 0.95
SCAMP4-205ENST00000452128 PIM2Q9P1W9 311 aa20.97■□□□□ 0.95
SCAMP4-205ENST00000452128 WWC3Q9ULE0 1092 aa20.97■□□□□ 0.95
SCAMP4-205ENST00000452128 N4BP2Q86UW6 1770 aaPredicted RBP20.97■□□□□ 0.95
SCAMP4-205ENST00000452128 ATP10DQ9P241 1426 aa20.96■□□□□ 0.95
SCAMP4-205ENST00000452128 GIGYF2Q6Y7W6 1299 aaKnown RBP20.96■□□□□ 0.95
SCAMP4-205ENST00000452128 FAM9BQ8IZU0 186 aa20.96■□□□□ 0.95
SCAMP4-205ENST00000452128 NECTIN2Q92692 538 aa20.96■□□□□ 0.95
SCAMP4-205ENST00000452128 NIP7Q9Y221 180 aaKnown RBP eCLIP20.96■□□□□ 0.95
SCAMP4-205ENST00000452128 COPS6Q7L5N1 327 aa20.95■□□□□ 0.94
SCAMP4-205ENST00000452128 WDR63Q8IWG1 891 aa20.95■□□□□ 0.94
SCAMP4-205ENST00000452128 CCDC24Q8N4L8 307 aa20.95■□□□□ 0.94
SCAMP4-205ENST00000452128 TSPYL6Q8N831 410 aa20.95■□□□□ 0.94
SCAMP4-205ENST00000452128 CHPF2Q9P2E5 772 aa20.95■□□□□ 0.94
SCAMP4-205ENST00000452128 BRCA1P38398 1863 aaKnown RBP20.94■□□□□ 0.94
SCAMP4-205ENST00000452128 HDGFL1Q5TGJ6 251 aa20.94■□□□□ 0.94
SCAMP4-205ENST00000452128 XAGE3Q8WTP9 111 aa20.94■□□□□ 0.94
SCAMP4-205ENST00000452128 ZBTB3Q9H5J0 574 aa20.94■□□□□ 0.94
SCAMP4-205ENST00000452128 CCER2I3L3R5 266 aa20.93■□□□□ 0.94
SCAMP4-205ENST00000452128 CNBD1Q8NA66 436 aa20.93■□□□□ 0.94
SCAMP4-205ENST00000452128 TSR2Q969E8 191 aaKnown RBP20.93■□□□□ 0.94
SCAMP4-205ENST00000452128 SPINK5Q9NQ38 1064 aaPredicted RBP20.93■□□□□ 0.94
SCAMP4-205ENST00000452128 DBF4Q9UBU7 674 aaPredicted RBP20.93■□□□□ 0.94
SCAMP4-205ENST00000452128 BCS1LQ9Y276 419 aa20.93■□□□□ 0.94
SCAMP4-205ENST00000452128 UBN2Q6ZU65 1347 aa20.93■□□□□ 0.94
SCAMP4-205ENST00000452128 ZNF521Q96K83 1311 aa20.93■□□□□ 0.94
SCAMP4-205ENST00000452128 DALRD3Q5D0E6 543 aaKnown RBP20.92■□□□□ 0.94
SCAMP4-205ENST00000452128 KIF6Q6ZMV9 814 aa20.92■□□□□ 0.94
SCAMP4-205ENST00000452128 C2CD5Q86YS7 1000 aa20.92■□□□□ 0.94
SCAMP4-205ENST00000452128 PDZRN3Q9UPQ7 1066 aa20.92■□□□□ 0.94
SCAMP4-205ENST00000452128 ELL2O00472 640 aaPredicted RBP20.91■□□□□ 0.94
SCAMP4-205ENST00000452128 TPTE2Q6XPS3 522 aa20.91■□□□□ 0.94
SCAMP4-205ENST00000452128 NBPF5PQ86XG9 351 aaPredicted RBP20.91■□□□□ 0.94
SCAMP4-205ENST00000452128 ANKRD31Q8N7Z5 1873 aa20.91■□□□□ 0.94
SCAMP4-205ENST00000452128 H0YIN7 160 aa20.9■□□□□ 0.94
SCAMP4-205ENST00000452128 SRGNP10124 158 aa20.9■□□□□ 0.94
SCAMP4-205ENST00000452128 PDE6BP35913 854 aa20.9■□□□□ 0.94
SCAMP4-205ENST00000452128 SUSD4Q5VX71 490 aa20.9■□□□□ 0.94
SCAMP4-205ENST00000452128 CHD4Q14839 1912 aa20.9■□□□□ 0.94
SCAMP4-205ENST00000452128 IBTKQ9P2D0 1353 aaPredicted RBP20.89■□□□□ 0.93
SCAMP4-205ENST00000452128 HYPKQ9NX55 129 aa20.89■□□□□ 0.93
SCAMP4-205ENST00000452128 NUP98P52948 1817 aa20.88■□□□□ 0.93
SCAMP4-205ENST00000452128 NTSR2O95665 410 aa20.88■□□□□ 0.93
SCAMP4-205ENST00000452128 TCIRG1Q13488 830 aa20.88■□□□□ 0.93
SCAMP4-205ENST00000452128 TTLL6Q8N841 843 aa20.88■□□□□ 0.93
SCAMP4-205ENST00000452128 ZNF784Q8NCA9 323 aaPredicted RBP20.88■□□□□ 0.93
SCAMP4-205ENST00000452128 PLBD2Q8NHP8 589 aa20.88■□□□□ 0.93
SCAMP4-205ENST00000452128 SALL2Q9Y467 1007 aaPredicted RBP20.88■□□□□ 0.93
SCAMP4-205ENST00000452128 ADCY9O60503 1353 aa20.87■□□□□ 0.93
SCAMP4-205ENST00000452128 GPTP24298 496 aa20.87■□□□□ 0.93
SCAMP4-205ENST00000452128 ST5P78524 1137 aa20.87■□□□□ 0.93
SCAMP4-205ENST00000452128 AIMP1Q12904 312 aaKnown RBP20.87■□□□□ 0.93
SCAMP4-205ENST00000452128 FANCIQ9NVI1 1328 aa20.86■□□□□ 0.93
SCAMP4-205ENST00000452128 CRY2Q49AN0 593 aa20.86■□□□□ 0.93
SCAMP4-205ENST00000452128 PARP10Q53GL7 1025 aa20.86■□□□□ 0.93
SCAMP4-205ENST00000452128 SLC10A5Q5PT55 438 aa20.86■□□□□ 0.93
SCAMP4-205ENST00000452128 STYK1Q6J9G0 422 aa20.86■□□□□ 0.93
SCAMP4-205ENST00000452128 ANKRD13DQ6ZTN6 518 aa20.86■□□□□ 0.93
SCAMP4-205ENST00000452128 C7orf43Q8WVR3 580 aa20.86■□□□□ 0.93
SCAMP4-205ENST00000452128 PHAXQ9H814 394 aaKnown RBP20.86■□□□□ 0.93
SCAMP4-205ENST00000452128 ABCC12Q96J65 1359 aa20.85■□□□□ 0.93
SCAMP4-205ENST00000452128 ERFEQ4G0M1 354 aa20.85■□□□□ 0.93
SCAMP4-205ENST00000452128 ARHGAP27Q6ZUM4 889 aa20.85■□□□□ 0.93
SCAMP4-205ENST00000452128 NLRP10Q86W26 655 aa20.85■□□□□ 0.93
SCAMP4-205ENST00000452128 NUTM1Q86Y26 1132 aa20.85■□□□□ 0.93
SCAMP4-205ENST00000452128 ISCA1Q9BUE6 129 aa20.85■□□□□ 0.93
SCAMP4-205ENST00000452128 NYXQ9GZU5 481 aa20.85■□□□□ 0.93
SCAMP4-205ENST00000452128 DLEC1Q9Y238 1755 aa20.85■□□□□ 0.93
SCAMP4-205ENST00000452128 FAM177BA6PVY3 158 aa20.84■□□□□ 0.93
SCAMP4-205ENST00000452128 VAMP4O75379 141 aa20.84■□□□□ 0.93
SCAMP4-205ENST00000452128 TRIM28Q13263 835 aaKnown RBP20.84■□□□□ 0.93
SCAMP4-205ENST00000452128 CCDC30Q5VVM6 783 aa20.84■□□□□ 0.93
SCAMP4-205ENST00000452128 MASTLQ96GX5 879 aa20.84■□□□□ 0.93
SCAMP4-205ENST00000452128 RIC1Q4ADV7 1423 aa20.84■□□□□ 0.93
SCAMP4-205ENST00000452128 ARFGEF1Q9Y6D6 1849 aa20.83■□□□□ 0.93
SCAMP4-205ENST00000452128 PRELPP51888 382 aa20.83■□□□□ 0.93
SCAMP4-205ENST00000452128 TWISTNBQ3B726 338 aaPredicted RBP20.83■□□□□ 0.93
SCAMP4-205ENST00000452128 HSP90AB3PQ58FF7 597 aa20.83■□□□□ 0.93
SCAMP4-205ENST00000452128 COL11A2P13942 1736 aaPredicted RBP20.82■□□□□ 0.92
SCAMP4-205ENST00000452128 C3orf67Q6ZVT6 689 aa20.82■□□□□ 0.92
SCAMP4-205ENST00000452128 ZNF622Q969S3 477 aaKnown RBP eCLIP20.82■□□□□ 0.92
SCAMP4-205ENST00000452128 CHMP4AQ9BY43 222 aa20.82■□□□□ 0.92
SCAMP4-205ENST00000452128 NPR1P16066 1061 aa20.81■□□□□ 0.92
SCAMP4-205ENST00000452128 HOXA10P31260 410 aaPredicted RBP20.81■□□□□ 0.92
SCAMP4-205ENST00000452128 SYNE4Q8N205 404 aa20.81■□□□□ 0.92
SCAMP4-205ENST00000452128 CNKSR1Q969H4 720 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms