RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 CCDC30Q5VVM6 783 aa15.54■□□□□ 0.08
SMPD4-212ENST00000451542 NLGN2Q8NFZ4 835 aa15.54■□□□□ 0.08
SMPD4-212ENST00000451542 HYPKQ9NX55 129 aa15.54■□□□□ 0.08
SMPD4-212ENST00000451542 PDZRN3Q9UPQ7 1066 aa15.54■□□□□ 0.08
SMPD4-212ENST00000451542 NIP7Q9Y221 180 aaKnown RBP eCLIP15.54■□□□□ 0.08
SMPD4-212ENST00000451542 C10orf71Q711Q0 1435 aa15.53■□□□□ 0.08
SMPD4-212ENST00000451542 ELL2O00472 640 aaPredicted RBP15.53■□□□□ 0.08
SMPD4-212ENST00000451542 ST5P78524 1137 aa15.53■□□□□ 0.08
SMPD4-212ENST00000451542 HSP90AB3PQ58FF7 597 aa15.53■□□□□ 0.08
SMPD4-212ENST00000451542 TPTE2Q6XPS3 522 aa15.53■□□□□ 0.08
SMPD4-212ENST00000451542 BCORQ6W2J9 1755 aa15.53■□□□□ 0.08
SMPD4-212ENST00000451542 GTF2E1P29083 439 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-212ENST00000451542 PDIA6Q15084 440 aa15.52■□□□□ 0.08
SMPD4-212ENST00000451542 NBPF5PQ86XG9 351 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-212ENST00000451542 CNBD1Q8NA66 436 aa15.52■□□□□ 0.08
SMPD4-212ENST00000451542 TSR2Q969E8 191 aaKnown RBP15.52■□□□□ 0.08
SMPD4-212ENST00000451542 STK31Q9BXU1 1019 aa15.52■□□□□ 0.08
SMPD4-212ENST00000451542 CHPF2Q9P2E5 772 aa15.52■□□□□ 0.08
SMPD4-212ENST00000451542 KIF13BQ9NQT8 1826 aa15.52■□□□□ 0.07
SMPD4-212ENST00000451542 PDE6BP35913 854 aa15.51■□□□□ 0.07
SMPD4-212ENST00000451542 AIMP1Q12904 312 aaKnown RBP15.51■□□□□ 0.07
SMPD4-212ENST00000451542 TWISTNBQ3B726 338 aaPredicted RBP15.51■□□□□ 0.07
SMPD4-212ENST00000451542 GIGYF2Q6Y7W6 1299 aaKnown RBP15.51■□□□□ 0.07
SMPD4-212ENST00000451542 TTLL7Q6ZT98 887 aa15.51■□□□□ 0.07
SMPD4-212ENST00000451542 COPS6Q7L5N1 327 aa15.51■□□□□ 0.07
SMPD4-212ENST00000451542 MIER1Q8N108 512 aa15.51■□□□□ 0.07
SMPD4-212ENST00000451542 NYXQ9GZU5 481 aa15.51■□□□□ 0.07
SMPD4-212ENST00000451542 ZBTB3Q9H5J0 574 aa15.51■□□□□ 0.07
SMPD4-212ENST00000451542 C8orf58Q8NAV2 365 aa15.5■□□□□ 0.07
SMPD4-212ENST00000451542 XAGE3Q8WTP9 111 aa15.5■□□□□ 0.07
SMPD4-212ENST00000451542 PIM2Q9P1W9 311 aa15.5■□□□□ 0.07
SMPD4-212ENST00000451542 AFDNP55196 1824 aaKnown RBP15.5■□□□□ 0.07
SMPD4-212ENST00000451542 SRCAPQ6ZRS2 3230 aa15.49■□□□□ 0.07
SMPD4-212ENST00000451542 FANCIQ9NVI1 1328 aa15.49■□□□□ 0.07
SMPD4-212ENST00000451542 H0YIN7 160 aa15.49■□□□□ 0.07
SMPD4-212ENST00000451542 DDX58O95786 925 aaKnown RBP15.49■□□□□ 0.07
SMPD4-212ENST00000451542 ANXA1P04083 346 aa15.49■□□□□ 0.07
SMPD4-212ENST00000451542 HLFQ16534 295 aa15.49■□□□□ 0.07
SMPD4-212ENST00000451542 PROSER3Q2NL68 480 aa15.49■□□□□ 0.07
SMPD4-212ENST00000451542 PARP10Q53GL7 1025 aa15.49■□□□□ 0.07
SMPD4-212ENST00000451542 PRR5LQ6MZQ0 368 aa15.49■□□□□ 0.07
SMPD4-212ENST00000451542 BRIP1Q9BX63 1249 aa15.49■□□□□ 0.07
SMPD4-212ENST00000451542 NUP98P52948 1817 aa15.48■□□□□ 0.07
SMPD4-212ENST00000451542 A0A0G2JLW4 131 aa15.48■□□□□ 0.07
SMPD4-212ENST00000451542 DPEP1P16444 411 aa15.48■□□□□ 0.07
SMPD4-212ENST00000451542 ANKRD13DQ6ZTN6 518 aa15.48■□□□□ 0.07
SMPD4-212ENST00000451542 LRP10Q7Z4F1 713 aa15.48■□□□□ 0.07
SMPD4-212ENST00000451542 PPP1R42Q7Z4L9 355 aa15.48■□□□□ 0.07
SMPD4-212ENST00000451542 PLBD2Q8NHP8 589 aa15.48■□□□□ 0.07
SMPD4-212ENST00000451542 ATP10DQ9P241 1426 aa15.48■□□□□ 0.07
SMPD4-212ENST00000451542 NRXN2Q9P2S2 1712 aa15.48■□□□□ 0.07
SMPD4-212ENST00000451542 PXDNLA1KZ92 1463 aa15.47■□□□□ 0.07
SMPD4-212ENST00000451542 E9PSI1 815 aa15.47■□□□□ 0.07
SMPD4-212ENST00000451542 FAM177BA6PVY3 158 aa15.46■□□□□ 0.07
SMPD4-212ENST00000451542 GPTP24298 496 aa15.46■□□□□ 0.07
SMPD4-212ENST00000451542 DALRD3Q5D0E6 543 aaKnown RBP15.46■□□□□ 0.07
SMPD4-212ENST00000451542 RIC3Q7Z5B4 369 aa15.46■□□□□ 0.07
SMPD4-212ENST00000451542 C2CD5Q86YS7 1000 aa15.46■□□□□ 0.07
SMPD4-212ENST00000451542 TSPYL6Q8N831 410 aa15.46■□□□□ 0.07
SMPD4-212ENST00000451542 BCS1LQ9Y276 419 aa15.46■□□□□ 0.07
SMPD4-212ENST00000451542 N4BP2Q86UW6 1770 aaPredicted RBP15.45■□□□□ 0.06
SMPD4-212ENST00000451542 EXOSC9Q06265 439 aaKnown RBP15.45■□□□□ 0.06
SMPD4-212ENST00000451542 TCIRG1Q13488 830 aa15.45■□□□□ 0.06
SMPD4-212ENST00000451542 ZNF34Q8IZ26 560 aa15.45■□□□□ 0.06
SMPD4-212ENST00000451542 IBTKQ9P2D0 1353 aaPredicted RBP15.45■□□□□ 0.06
SMPD4-212ENST00000451542 RNF123Q5XPI4 1314 aa15.44■□□□□ 0.06
SMPD4-212ENST00000451542 ZNF521Q96K83 1311 aa15.44■□□□□ 0.06
SMPD4-212ENST00000451542 CACNA1FO60840 1977 aa15.44■□□□□ 0.06
SMPD4-212ENST00000451542 CHRNA5P30532 468 aa15.44■□□□□ 0.06
SMPD4-212ENST00000451542 SLC4A2P04920 1241 aa15.43■□□□□ 0.06
SMPD4-212ENST00000451542 YBX3P16989 372 aaKnown RBP eCLIP15.43■□□□□ 0.064e-12■■□□□ 11.6
SMPD4-212ENST00000451542 TTLL6Q8N841 843 aa15.43■□□□□ 0.06
SMPD4-212ENST00000451542 ZNF622Q969S3 477 aaKnown RBP eCLIP15.43■□□□□ 0.06
SMPD4-212ENST00000451542 UTP14AQ9BVJ6 771 aaKnown RBP15.43■□□□□ 0.06
SMPD4-212ENST00000451542 WWC3Q9ULE0 1092 aa15.43■□□□□ 0.06
SMPD4-212ENST00000451542 CHD4Q14839 1912 aa15.43■□□□□ 0.06
SMPD4-212ENST00000451542 VAMP4O75379 141 aa15.42■□□□□ 0.06
SMPD4-212ENST00000451542 HSP90B1P14625 803 aaKnown RBP15.42■□□□□ 0.06
SMPD4-212ENST00000451542 NEXNQ0ZGT2 675 aa15.42■□□□□ 0.06
SMPD4-212ENST00000451542 CNKSR1Q969H4 720 aa15.42■□□□□ 0.06
SMPD4-212ENST00000451542 PHAXQ9H814 394 aaKnown RBP15.42■□□□□ 0.06
SMPD4-212ENST00000451542 KCNA3P22001 575 aa15.41■□□□□ 0.06
SMPD4-212ENST00000451542 YY1P25490 414 aa15.41■□□□□ 0.06
SMPD4-212ENST00000451542 SUSD4Q5VX71 490 aa15.41■□□□□ 0.06
SMPD4-212ENST00000451542 STYK1Q6J9G0 422 aa15.41■□□□□ 0.06
SMPD4-212ENST00000451542 CCDC24Q8N4L8 307 aa15.41■□□□□ 0.06
SMPD4-212ENST00000451542 ZNF428Q96B54 188 aa15.41■□□□□ 0.06
SMPD4-212ENST00000451542 MASTLQ96GX5 879 aa15.41■□□□□ 0.06
SMPD4-212ENST00000451542 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
SMPD4-212ENST00000451542 ANKRD36CQ5JPF3 1778 aa15.41■□□□□ 0.06
SMPD4-212ENST00000451542 KIAA1551Q9HCM1 1747 aa15.4■□□□□ 0.06
SMPD4-212ENST00000451542 NPR1P16066 1061 aa15.4■□□□□ 0.06
SMPD4-212ENST00000451542 ALDH1B1P30837 517 aa15.4■□□□□ 0.06
SMPD4-212ENST00000451542 SLFN5Q08AF3 891 aa15.4■□□□□ 0.06
SMPD4-212ENST00000451542 KSR2Q6VAB6 950 aa15.4■□□□□ 0.06
SMPD4-212ENST00000451542 NLRP10Q86W26 655 aa15.4■□□□□ 0.06
SMPD4-212ENST00000451542 NLRP3Q96P20 1036 aa15.4■□□□□ 0.06
SMPD4-212ENST00000451542 TRMT112Q9UI30 125 aaKnown RBP15.4■□□□□ 0.06
SMPD4-212ENST00000451542 UBN2Q6ZU65 1347 aa15.4■□□□□ 0.06
SMPD4-212ENST00000451542 TCERG1O14776 1098 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms