RNA–Protein interactions for RNA: ENST00000451349.1

SSXP4-201, Transcript of SSX family pseudogene 4, humanhuman

BASIC

Gene SSXP4, Length 245 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP4-201ENST00000451349 H2AFB1P0C5Y9 115 aa4.89□□□□□ -1.63
SSXP4-201ENST00000451349 H2AFB2P0C5Z0 115 aa4.89□□□□□ -1.63
SSXP4-201ENST00000451349 GTF2E1P29083 439 aaPredicted RBP4.89□□□□□ -1.63
SSXP4-201ENST00000451349 PRRT3Q5FWE3 981 aa4.89□□□□□ -1.63
SSXP4-201ENST00000451349 ADAMTS19Q8TE59 1207 aa4.89□□□□□ -1.63
SSXP4-201ENST00000451349 CNKSR1Q969H4 720 aa4.89□□□□□ -1.63
SSXP4-201ENST00000451349 ESYT1Q9BSJ8 1104 aa4.89□□□□□ -1.63
SSXP4-201ENST00000451349 COL17A1Q9UMD9 1497 aaPredicted RBP4.88□□□□□ -1.63
SSXP4-201ENST00000451349 USP17L5A8MUK1 530 aa4.88□□□□□ -1.63
SSXP4-201ENST00000451349 ATP9BO43861 1147 aa4.88□□□□□ -1.63
SSXP4-201ENST00000451349 PPP1R15AO75807 674 aaPredicted RBP4.88□□□□□ -1.63
SSXP4-201ENST00000451349 NCLP19338 710 aaKnown RBP4.88□□□□□ -1.63
SSXP4-201ENST00000451349 PSME1Q06323 249 aa4.88□□□□□ -1.63
SSXP4-201ENST00000451349 NCOA4Q13772 614 aa4.88□□□□□ -1.63
SSXP4-201ENST00000451349 CCDC27Q2M243 656 aa4.88□□□□□ -1.63
SSXP4-201ENST00000451349 CHSY3Q70JA7 882 aa4.88□□□□□ -1.63
SSXP4-201ENST00000451349 TICAM2Q86XR7 235 aa4.88□□□□□ -1.63
SSXP4-201ENST00000451349 GRIP2Q9C0E4 1043 aa4.88□□□□□ -1.63
SSXP4-201ENST00000451349 RAB6BQ9NRW1 208 aa4.88□□□□□ -1.63
SSXP4-201ENST00000451349 ACIN1Q9UKV3 1341 aaKnown RBP4.88□□□□□ -1.63
SSXP4-201ENST00000451349 A0A1B0GTH6 734 aa4.87□□□□□ -1.63
SSXP4-201ENST00000451349 CSB-PGBD3P0DP91 1061 aa4.87□□□□□ -1.63
SSXP4-201ENST00000451349 FGFR3P22607 806 aa4.87□□□□□ -1.63
SSXP4-201ENST00000451349 FZD5Q13467 585 aa4.87□□□□□ -1.63
SSXP4-201ENST00000451349 TBC1D9Q6ZT07 1266 aa4.87□□□□□ -1.63
SSXP4-201ENST00000451349 TRIM50Q86XT4 487 aa4.87□□□□□ -1.63
SSXP4-201ENST00000451349 DEPDC4Q8N2C3 294 aa4.87□□□□□ -1.63
SSXP4-201ENST00000451349 PGBD3Q8N328 593 aa4.87□□□□□ -1.63
SSXP4-201ENST00000451349 XAGE2Q96GT9 111 aa4.87□□□□□ -1.63
SSXP4-201ENST00000451349 PLVAPQ9BX97 442 aa4.87□□□□□ -1.63
SSXP4-201ENST00000451349 AVENQ9NQS1 362 aaPredicted RBP4.87□□□□□ -1.63
SSXP4-201ENST00000451349 TFIP11Q9UBB9 837 aaKnown RBP4.87□□□□□ -1.63
SSXP4-201ENST00000451349 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.87□□□□□ -1.63
SSXP4-201ENST00000451349 USP17L3A6NCW0 530 aa4.86□□□□□ -1.63
SSXP4-201ENST00000451349 USP17L4A6NCW7 530 aa4.86□□□□□ -1.63
SSXP4-201ENST00000451349 BRD1O95696 1058 aa4.86□□□□□ -1.63
SSXP4-201ENST00000451349 IL2RAP01589 272 aa4.86□□□□□ -1.63
SSXP4-201ENST00000451349 ELNP15502 786 aa4.86□□□□□ -1.63
SSXP4-201ENST00000451349 ATP1A2P50993 1020 aa4.86□□□□□ -1.63
SSXP4-201ENST00000451349 GDF10P55107 478 aa4.86□□□□□ -1.63
SSXP4-201ENST00000451349 GTF2IP78347 998 aa4.86□□□□□ -1.63
SSXP4-201ENST00000451349 CENPCQ03188 943 aa4.86□□□□□ -1.63
SSXP4-201ENST00000451349 EFHC2Q5JST6 749 aa4.86□□□□□ -1.63
SSXP4-201ENST00000451349 TMEM214Q6NUQ4 689 aaKnown RBP4.86□□□□□ -1.63
SSXP4-201ENST00000451349 USP17L2Q6R6M4 530 aa4.86□□□□□ -1.63
SSXP4-201ENST00000451349 USP17L1Q7RTZ2 530 aa4.86□□□□□ -1.63
SSXP4-201ENST00000451349 CERS3Q8IU89 383 aa4.86□□□□□ -1.63
SSXP4-201ENST00000451349 PLEKHM2Q8IWE5 1019 aa4.86□□□□□ -1.63
SSXP4-201ENST00000451349 UCN2Q96RP3 112 aa4.86□□□□□ -1.63
SSXP4-201ENST00000451349 ZSCAN10Q96SZ4 725 aaPredicted RBP4.86□□□□□ -1.63
SSXP4-201ENST00000451349 RBM19Q9Y4C8 960 aaKnown RBP4.86□□□□□ -1.63
SSXP4-201ENST00000451349 PALM3A6NDB9 673 aaPredicted RBP4.85□□□□□ -1.63
SSXP4-201ENST00000451349 BACH1O14867 736 aa4.85□□□□□ -1.63
SSXP4-201ENST00000451349 INHAP05111 366 aa4.85□□□□□ -1.63
SSXP4-201ENST00000451349 THBS1P07996 1170 aa4.85□□□□□ -1.63
SSXP4-201ENST00000451349 ADH6P28332 368 aa4.85□□□□□ -1.63
SSXP4-201ENST00000451349 GNASQ5JWF2 1037 aa4.85□□□□□ -1.63
SSXP4-201ENST00000451349 ANKRD13AQ8IZ07 590 aa4.85□□□□□ -1.63
SSXP4-201ENST00000451349 TRIM11Q96F44 468 aa4.85□□□□□ -1.63
SSXP4-201ENST00000451349 PPP1R12CQ9BZL4 782 aa4.85□□□□□ -1.63
SSXP4-201ENST00000451349 ETNK1Q9HBU6 452 aa4.85□□□□□ -1.63
SSXP4-201ENST00000451349 MKRN1Q9UHC7 482 aaKnown RBP4.85□□□□□ -1.63
SSXP4-201ENST00000451349 PCDHGA11Q9Y5H2 935 aa4.85□□□□□ -1.63
SSXP4-201ENST00000451349 NEURL1BA8MQ27 555 aa4.84□□□□□ -1.63
SSXP4-201ENST00000451349 C2CD2LO14523 706 aa4.84□□□□□ -1.63
SSXP4-201ENST00000451349 SCNN1DP51172 638 aa4.84□□□□□ -1.63
SSXP4-201ENST00000451349 UBAP2LQ14157 1087 aaKnown RBP4.84□□□□□ -1.63
SSXP4-201ENST00000451349 TLR1Q15399 786 aa4.84□□□□□ -1.63
SSXP4-201ENST00000451349 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
SSXP4-201ENST00000451349 SERTAD1Q9UHV2 236 aa4.84□□□□□ -1.63
SSXP4-201ENST00000451349 MAFBQ9Y5Q3 323 aaPredicted RBP4.84□□□□□ -1.63
SSXP4-201ENST00000451349 STAU1O95793 577 aaKnown RBP4.83□□□□□ -1.64
SSXP4-201ENST00000451349 RASA1P20936 1047 aa4.83□□□□□ -1.64
SSXP4-201ENST00000451349 LMOD1P29536 600 aaPredicted RBP4.83□□□□□ -1.64
SSXP4-201ENST00000451349 SMTNP53814 917 aa4.83□□□□□ -1.64
SSXP4-201ENST00000451349 ZNF326Q5BKZ1 582 aaKnown RBP4.83□□□□□ -1.64
SSXP4-201ENST00000451349 FIGNL1Q6PIW4 674 aa4.83□□□□□ -1.64
SSXP4-201ENST00000451349 LARP1Q6PKG0 1096 aaKnown RBP4.83□□□□□ -1.64
SSXP4-201ENST00000451349 LARGE2Q8N3Y3 721 aa4.83□□□□□ -1.64
SSXP4-201ENST00000451349 OGFOD1Q8N543 542 aa4.83□□□□□ -1.64
SSXP4-201ENST00000451349 SPATA32Q96LK8 384 aa4.83□□□□□ -1.64
SSXP4-201ENST00000451349 GPAMQ9HCL2 828 aa4.83□□□□□ -1.64
SSXP4-201ENST00000451349 NDFIP2Q9NV92 336 aa4.83□□□□□ -1.64
SSXP4-201ENST00000451349 DNAAF2Q9NVR5 837 aaKnown RBP4.83□□□□□ -1.64
SSXP4-201ENST00000451349 HRH3Q9Y5N1 445 aa4.83□□□□□ -1.64
SSXP4-201ENST00000451349 PHKA2P46019 1235 aa4.82□□□□□ -1.64
SSXP4-201ENST00000451349 CCDC102BQ68D86 513 aa4.82□□□□□ -1.64
SSXP4-201ENST00000451349 PPARGC1BQ86YN6 1023 aaKnown RBP4.82□□□□□ -1.64
SSXP4-201ENST00000451349 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.82□□□□□ -1.64
SSXP4-201ENST00000451349 TPCN2Q8NHX9 752 aa4.82□□□□□ -1.64
SSXP4-201ENST00000451349 RHBDD1Q8TEB9 315 aa4.82□□□□□ -1.64
SSXP4-201ENST00000451349 ABHD17AQ96GS6 310 aa4.82□□□□□ -1.64
SSXP4-201ENST00000451349 SLC4A9Q96Q91 983 aa4.82□□□□□ -1.64
SSXP4-201ENST00000451349 FHDC1Q9C0D6 1143 aaPredicted RBP4.82□□□□□ -1.64
SSXP4-201ENST00000451349 VRTNQ9H8Y1 702 aa4.82□□□□□ -1.64
SSXP4-201ENST00000451349 IGSF5Q9NSI5 407 aa4.82□□□□□ -1.64
SSXP4-201ENST00000451349 ARID1BQ8NFD5 2236 aaPredicted RBP4.82□□□□□ -1.64
SSXP4-201ENST00000451349 A6NJY4 79 aa4.81□□□□□ -1.64
SSXP4-201ENST00000451349 TMEM229AB2RXF0 380 aa4.81□□□□□ -1.64
SSXP4-201ENST00000451349 CDK2AP1O14519 115 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms