RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 THUMPD2Q9BTF0 503 aaKnown RBP20.99■□□□□ 0.95
SGCE-208ENST00000450385 ANKRD31Q8N7Z5 1873 aa20.98■□□□□ 0.95
SGCE-208ENST00000450385 STYK1Q6J9G0 422 aa20.98■□□□□ 0.95
SGCE-208ENST00000450385 NBPF5PQ86XG9 351 aaPredicted RBP20.98■□□□□ 0.95
SGCE-208ENST00000450385 CNKSR1Q969H4 720 aa20.98■□□□□ 0.95
SGCE-208ENST00000450385 CHL1O00533 1208 aa20.97■□□□□ 0.95
SGCE-208ENST00000450385 SOGA3Q5TF21 947 aa20.97■□□□□ 0.95
SGCE-208ENST00000450385 KIF6Q6ZMV9 814 aa20.97■□□□□ 0.95
SGCE-208ENST00000450385 NYXQ9GZU5 481 aa20.97■□□□□ 0.95
SGCE-208ENST00000450385 NIP7Q9Y221 180 aaKnown RBP eCLIP20.97■□□□□ 0.95
SGCE-208ENST00000450385 NUP98P52948 1817 aa20.97■□□□□ 0.95
SGCE-208ENST00000450385 KLRG2A4D1S0 409 aaPredicted RBP20.96■□□□□ 0.95
SGCE-208ENST00000450385 PIP4K2AP48426 406 aaPredicted RBP20.96■□□□□ 0.95
SGCE-208ENST00000450385 CALD1Q05682 793 aaKnown RBP20.96■□□□□ 0.95
SGCE-208ENST00000450385 MASTLQ96GX5 879 aa20.96■□□□□ 0.95
SGCE-208ENST00000450385 MAP3K15Q6ZN16 1313 aa20.96■□□□□ 0.95
SGCE-208ENST00000450385 HOXB7P09629 217 aa20.95■□□□□ 0.94
SGCE-208ENST00000450385 SRGNP10124 158 aa20.95■□□□□ 0.94
SGCE-208ENST00000450385 C9orf131Q5VYM1 1079 aa20.95■□□□□ 0.94
SGCE-208ENST00000450385 TRIM35Q9UPQ4 493 aa20.95■□□□□ 0.94
SGCE-208ENST00000450385 RRP7AQ9Y3A4 280 aaKnown RBP20.95■□□□□ 0.94
SGCE-208ENST00000450385 CCDC146Q8IYE0 955 aa20.94■□□□□ 0.94
SGCE-208ENST00000450385 ZNF622Q969S3 477 aaKnown RBP eCLIP20.94■□□□□ 0.94
SGCE-208ENST00000450385 LMNB1P20700 586 aa20.93■□□□□ 0.94
SGCE-208ENST00000450385 NEUROD2Q15784 382 aa20.93■□□□□ 0.94
SGCE-208ENST00000450385 CFAP44Q96MT7 982 aa20.93■□□□□ 0.94
SGCE-208ENST00000450385 CHMP4AQ9BY43 222 aa20.93■□□□□ 0.94
SGCE-208ENST00000450385 HLFQ16534 295 aa20.92■□□□□ 0.94
SGCE-208ENST00000450385 KDM2BQ8NHM5 1336 aa20.92■□□□□ 0.94
SGCE-208ENST00000450385 IBTKQ9P2D0 1353 aaPredicted RBP20.92■□□□□ 0.94
SGCE-208ENST00000450385 ARFGEF2Q9Y6D5 1785 aa20.92■□□□□ 0.94
SGCE-208ENST00000450385 NPR1P16066 1061 aa20.91■□□□□ 0.94
SGCE-208ENST00000450385 GTF2E1P29083 439 aaPredicted RBP20.91■□□□□ 0.94
SGCE-208ENST00000450385 GIGYF2Q6Y7W6 1299 aaKnown RBP20.91■□□□□ 0.94
SGCE-208ENST00000450385 RNF181Q9P0P0 153 aa20.91■□□□□ 0.94
SGCE-208ENST00000450385 CCDC88AQ3V6T2 1871 aa20.9■□□□□ 0.94
SGCE-208ENST00000450385 LTBP3Q9NS15 1303 aa20.9■□□□□ 0.94
SGCE-208ENST00000450385 ZNF316A6NFI3 1004 aaPredicted RBP20.9■□□□□ 0.94
SGCE-208ENST00000450385 MYL6BP14649 208 aa20.9■□□□□ 0.94
SGCE-208ENST00000450385 ALDH1B1P30837 517 aa20.9■□□□□ 0.94
SGCE-208ENST00000450385 NCBP3Q53F19 620 aaKnown RBP20.9■□□□□ 0.94
SGCE-208ENST00000450385 PARP10Q53GL7 1025 aa20.9■□□□□ 0.94
SGCE-208ENST00000450385 FER1L6Q2WGJ9 1857 aa20.9■□□□□ 0.94
SGCE-208ENST00000450385 PDIA6Q15084 440 aa20.89■□□□□ 0.93
SGCE-208ENST00000450385 PPP1R42Q7Z4L9 355 aa20.89■□□□□ 0.93
SGCE-208ENST00000450385 ZNF526Q8TF50 670 aaPredicted RBP20.89■□□□□ 0.93
SGCE-208ENST00000450385 DDX21Q9NR30 783 aaKnown RBP eCLIP20.89■□□□□ 0.93
SGCE-208ENST00000450385 DICER1Q9UPY3 1922 aaKnown RBP20.88■□□□□ 0.93
SGCE-208ENST00000450385 RIC1Q4ADV7 1423 aa20.88■□□□□ 0.93
SGCE-208ENST00000450385 COL11A2P13942 1736 aaPredicted RBP20.88■□□□□ 0.93
SGCE-208ENST00000450385 KIF3CO14782 793 aa20.88■□□□□ 0.93
SGCE-208ENST00000450385 EIF2S2P20042 333 aaKnown RBP20.88■□□□□ 0.93
SGCE-208ENST00000450385 HSP90AB3PQ58FF7 597 aa20.88■□□□□ 0.93
SGCE-208ENST00000450385 TTLL7Q6ZT98 887 aa20.88■□□□□ 0.93
SGCE-208ENST00000450385 LRP10Q7Z4F1 713 aa20.88■□□□□ 0.93
SGCE-208ENST00000450385 ZNF34Q8IZ26 560 aa20.88■□□□□ 0.93
SGCE-208ENST00000450385 NGEFQ8N5V2 710 aa20.88■□□□□ 0.93
SGCE-208ENST00000450385 RNF123Q5XPI4 1314 aa20.87■□□□□ 0.93
SGCE-208ENST00000450385 TOMM70O94826 608 aa20.87■□□□□ 0.93
SGCE-208ENST00000450385 SLX4Q8IY92 1834 aa20.86■□□□□ 0.93
SGCE-208ENST00000450385 GNAI1P63096 354 aa20.86■□□□□ 0.93
SGCE-208ENST00000450385 GRIPAP1Q4V328 841 aa20.86■□□□□ 0.93
SGCE-208ENST00000450385 PRPF40BQ6NWY9 871 aaKnown RBP20.86■□□□□ 0.93
SGCE-208ENST00000450385 IFT57Q9NWB7 429 aa20.86■□□□□ 0.93
SGCE-208ENST00000450385 APAF1O14727 1248 aa20.85■□□□□ 0.93
SGCE-208ENST00000450385 C21orf2O43822 256 aa20.85■□□□□ 0.93
SGCE-208ENST00000450385 ZNF853P0CG23 659 aa20.85■□□□□ 0.93
SGCE-208ENST00000450385 CRY2Q49AN0 593 aa20.85■□□□□ 0.93
SGCE-208ENST00000450385 CCDC24Q8N4L8 307 aa20.85■□□□□ 0.93
SGCE-208ENST00000450385 LAS1LQ9Y4W2 734 aaKnown RBP20.85■□□□□ 0.93
SGCE-208ENST00000450385 NFKBIEO00221 500 aa20.84■□□□□ 0.93
SGCE-208ENST00000450385 RTKN2Q8IZC4 609 aa20.84■□□□□ 0.93
SGCE-208ENST00000450385 C7orf43Q8WVR3 580 aa20.84■□□□□ 0.93
SGCE-208ENST00000450385 ZBTB3Q9H5J0 574 aa20.84■□□□□ 0.93
SGCE-208ENST00000450385 DBF4Q9UBU7 674 aaPredicted RBP20.84■□□□□ 0.93
SGCE-208ENST00000450385 SENP3-EIF4A1A0A087X0R7 540 aa20.83■□□□□ 0.93
SGCE-208ENST00000450385 GLTPD2A6NH11 291 aa20.83■□□□□ 0.93
SGCE-208ENST00000450385 ANP32CO43423 234 aa20.83■□□□□ 0.93
SGCE-208ENST00000450385 CCDC27Q2M243 656 aa20.83■□□□□ 0.93
SGCE-208ENST00000450385 CC2D2BQ6DHV5 1058 aa20.83■□□□□ 0.93
SGCE-208ENST00000450385 DPY19L2Q6NUT2 758 aa20.83■□□□□ 0.93
SGCE-208ENST00000450385 TAOK3Q9H2K8 898 aa20.83■□□□□ 0.93
SGCE-208ENST00000450385 TNRC6CQ9HCJ0 1690 aaKnown RBP20.83■□□□□ 0.92
SGCE-208ENST00000450385 CACNA1SQ13698 1873 aa20.82■□□□□ 0.92
SGCE-208ENST00000450385 HOXA10P31260 410 aaPredicted RBP20.82■□□□□ 0.92
SGCE-208ENST00000450385 CCDC93Q567U6 631 aa20.82■□□□□ 0.92
SGCE-208ENST00000450385 SLC10A5Q5PT55 438 aa20.82■□□□□ 0.92
SGCE-208ENST00000450385 COPS6Q7L5N1 327 aa20.82■□□□□ 0.92
SGCE-208ENST00000450385 HYPKQ9NX55 129 aa20.82■□□□□ 0.92
SGCE-208ENST00000450385 CEP350Q5VT06 3117 aa20.81■□□□□ 0.92
SGCE-208ENST00000450385 RASSF7Q02833 373 aa20.81■□□□□ 0.92
SGCE-208ENST00000450385 HDGFL1Q5TGJ6 251 aa20.81■□□□□ 0.92
SGCE-208ENST00000450385 C16orf71Q8IYS4 520 aaPredicted RBP20.81■□□□□ 0.92
SGCE-208ENST00000450385 RBM46Q8TBY0 533 aaKnown RBP20.81■□□□□ 0.92
SGCE-208ENST00000450385 UBN2Q6ZU65 1347 aa20.8■□□□□ 0.92
SGCE-208ENST00000450385 HSPA6P17066 643 aa20.8■□□□□ 0.92
SGCE-208ENST00000450385 TCIRG1Q13488 830 aa20.8■□□□□ 0.92
SGCE-208ENST00000450385 SUSD4Q5VX71 490 aa20.8■□□□□ 0.92
SGCE-208ENST00000450385 UTP14AQ9BVJ6 771 aaKnown RBP20.8■□□□□ 0.92
SGCE-208ENST00000450385 MBIPQ9NS73 344 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms