RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 TPTE2Q6XPS3 522 aa22.77■■□□□ 1.24
CLTCL1-203ENST00000449918 ADAMTS8Q9UP79 889 aa22.77■■□□□ 1.24
CLTCL1-203ENST00000449918 NIP7Q9Y221 180 aaKnown RBP eCLIP22.77■■□□□ 1.24
CLTCL1-203ENST00000449918 RRP7AQ9Y3A4 280 aaKnown RBP22.77■■□□□ 1.24
CLTCL1-203ENST00000449918 NGEFQ8N5V2 710 aa22.76■■□□□ 1.23
CLTCL1-203ENST00000449918 RNF181Q9P0P0 153 aa22.76■■□□□ 1.23
CLTCL1-203ENST00000449918 ERVV-1B6SEH8 477 aa22.75■■□□□ 1.23
CLTCL1-203ENST00000449918 KDM3BQ7LBC6 1761 aa22.75■■□□□ 1.23
CLTCL1-203ENST00000449918 KIF6Q6ZMV9 814 aa22.74■■□□□ 1.23
CLTCL1-203ENST00000449918 ERBB4Q15303 1308 aa22.74■■□□□ 1.23
CLTCL1-203ENST00000449918 MYL6BP14649 208 aa22.73■■□□□ 1.23
CLTCL1-203ENST00000449918 HLFQ16534 295 aa22.73■■□□□ 1.23
CLTCL1-203ENST00000449918 STYK1Q6J9G0 422 aa22.73■■□□□ 1.23
CLTCL1-203ENST00000449918 CNKSR1Q969H4 720 aa22.73■■□□□ 1.23
CLTCL1-203ENST00000449918 BCORQ6W2J9 1755 aa22.73■■□□□ 1.23
CLTCL1-203ENST00000449918 SRGNP10124 158 aa22.72■■□□□ 1.23
CLTCL1-203ENST00000449918 MASTLQ96GX5 879 aa22.72■■□□□ 1.23
CLTCL1-203ENST00000449918 MAP3K15Q6ZN16 1313 aa22.72■■□□□ 1.23
CLTCL1-203ENST00000449918 KIF3CO14782 793 aa22.71■■□□□ 1.23
CLTCL1-203ENST00000449918 LMNB1P20700 586 aa22.71■■□□□ 1.23
CLTCL1-203ENST00000449918 GTF2E1P29083 439 aaPredicted RBP22.71■■□□□ 1.23
CLTCL1-203ENST00000449918 LAMB4A4D0S4 1761 aa22.71■■□□□ 1.23
CLTCL1-203ENST00000449918 EIF2S2P20042 333 aaKnown RBP22.7■■□□□ 1.22
CLTCL1-203ENST00000449918 RASSF7Q02833 373 aa22.7■■□□□ 1.22
CLTCL1-203ENST00000449918 TRIM35Q9UPQ4 493 aa22.7■■□□□ 1.22
CLTCL1-203ENST00000449918 KDM2BQ8NHM5 1336 aa22.7■■□□□ 1.22
CLTCL1-203ENST00000449918 DLEC1Q9Y238 1755 aa22.7■■□□□ 1.22
CLTCL1-203ENST00000449918 ZC3H4Q9UPT8 1303 aaKnown RBP22.69■■□□□ 1.22
CLTCL1-203ENST00000449918 FAM177BA6PVY3 158 aa22.69■■□□□ 1.22
CLTCL1-203ENST00000449918 CHL1O00533 1208 aa22.69■■□□□ 1.22
CLTCL1-203ENST00000449918 C21orf2O43822 256 aa22.69■■□□□ 1.22
CLTCL1-203ENST00000449918 TTLL7Q6ZT98 887 aa22.69■■□□□ 1.22
CLTCL1-203ENST00000449918 NYXQ9GZU5 481 aa22.69■■□□□ 1.22
CLTCL1-203ENST00000449918 LAS1LQ9Y4W2 734 aaKnown RBP22.69■■□□□ 1.22
CLTCL1-203ENST00000449918 ANKRD31Q8N7Z5 1873 aa22.67■■□□□ 1.22
CLTCL1-203ENST00000449918 NPR1P16066 1061 aa22.67■■□□□ 1.22
CLTCL1-203ENST00000449918 SOGA3Q5TF21 947 aa22.67■■□□□ 1.22
CLTCL1-203ENST00000449918 ZBTB3Q9H5J0 574 aa22.67■■□□□ 1.22
CLTCL1-203ENST00000449918 ZNF219Q9P2Y4 722 aaPredicted RBP22.67■■□□□ 1.22
CLTCL1-203ENST00000449918 KLRG2A4D1S0 409 aaPredicted RBP22.66■■□□□ 1.22
CLTCL1-203ENST00000449918 NFKBIEO00221 500 aa22.66■■□□□ 1.22
CLTCL1-203ENST00000449918 PRPF40BQ6NWY9 871 aaKnown RBP22.66■■□□□ 1.22
CLTCL1-203ENST00000449918 NMRK2Q9NPI5 230 aa22.66■■□□□ 1.22
CLTCL1-203ENST00000449918 TOMM70O94826 608 aa22.65■■□□□ 1.22
CLTCL1-203ENST00000449918 PDIA6Q15084 440 aa22.64■■□□□ 1.21
CLTCL1-203ENST00000449918 GIGYF2Q6Y7W6 1299 aaKnown RBP22.64■■□□□ 1.21
CLTCL1-203ENST00000449918 C16orf71Q8IYS4 520 aaPredicted RBP22.64■■□□□ 1.21
CLTCL1-203ENST00000449918 GPTP24298 496 aa22.63■■□□□ 1.21
CLTCL1-203ENST00000449918 PRELPP51888 382 aa22.63■■□□□ 1.21
CLTCL1-203ENST00000449918 CFAP44Q96MT7 982 aa22.63■■□□□ 1.21
CLTCL1-203ENST00000449918 APAF1O14727 1248 aa22.62■■□□□ 1.21
CLTCL1-203ENST00000449918 ALDH1B1P30837 517 aa22.62■■□□□ 1.21
CLTCL1-203ENST00000449918 LRP10Q7Z4F1 713 aa22.62■■□□□ 1.21
CLTCL1-203ENST00000449918 ZNF34Q8IZ26 560 aa22.62■■□□□ 1.21
CLTCL1-203ENST00000449918 NECTIN2Q92692 538 aa22.62■■□□□ 1.21
CLTCL1-203ENST00000449918 TAOK3Q9H2K8 898 aa22.62■■□□□ 1.21
CLTCL1-203ENST00000449918 LTBP3Q9NS15 1303 aa22.61■■□□□ 1.21
CLTCL1-203ENST00000449918 COL11A2P13942 1736 aaPredicted RBP22.61■■□□□ 1.21
CLTCL1-203ENST00000449918 HSPA6P17066 643 aa22.61■■□□□ 1.21
CLTCL1-203ENST00000449918 CALD1Q05682 793 aaKnown RBP22.61■■□□□ 1.21
CLTCL1-203ENST00000449918 PROSER3Q2NL68 480 aa22.61■■□□□ 1.21
CLTCL1-203ENST00000449918 PPP1R42Q7Z4L9 355 aa22.61■■□□□ 1.21
CLTCL1-203ENST00000449918 NUTM1Q86Y26 1132 aa22.61■■□□□ 1.21
CLTCL1-203ENST00000449918 SBF1O95248 1867 aa22.6■■□□□ 1.21
CLTCL1-203ENST00000449918 GLTPD2A6NH11 291 aa22.6■■□□□ 1.21
CLTCL1-203ENST00000449918 HOXB7P09629 217 aa22.6■■□□□ 1.21
CLTCL1-203ENST00000449918 ERFEQ4G0M1 354 aa22.6■■□□□ 1.21
CLTCL1-203ENST00000449918 PARP10Q53GL7 1025 aa22.6■■□□□ 1.21
CLTCL1-203ENST00000449918 SUSD4Q5VX71 490 aa22.6■■□□□ 1.21
CLTCL1-203ENST00000449918 RRAGCQ9HB90 399 aa22.6■■□□□ 1.21
CLTCL1-203ENST00000449918 DDX21Q9NR30 783 aaKnown RBP eCLIP22.6■■□□□ 1.21
CLTCL1-203ENST00000449918 IBTKQ9P2D0 1353 aaPredicted RBP22.6■■□□□ 1.21
CLTCL1-203ENST00000449918 UBN2Q6ZU65 1347 aa22.59■■□□□ 1.21
CLTCL1-203ENST00000449918 ANXA1P04083 346 aa22.59■■□□□ 1.21
CLTCL1-203ENST00000449918 KRT24Q2M2I5 525 aa22.59■■□□□ 1.21
CLTCL1-203ENST00000449918 CCDC93Q567U6 631 aa22.59■■□□□ 1.21
CLTCL1-203ENST00000449918 DPY19L2Q6NUT2 758 aa22.59■■□□□ 1.21
CLTCL1-203ENST00000449918 COPS6Q7L5N1 327 aa22.59■■□□□ 1.21
CLTCL1-203ENST00000449918 C7orf43Q8WVR3 580 aa22.59■■□□□ 1.21
CLTCL1-203ENST00000449918 ZNF316A6NFI3 1004 aaPredicted RBP22.58■■□□□ 1.21
CLTCL1-203ENST00000449918 AIMP1Q12904 312 aaKnown RBP22.58■■□□□ 1.21
CLTCL1-203ENST00000449918 CRY2Q49AN0 593 aa22.58■■□□□ 1.21
CLTCL1-203ENST00000449918 HSP90AB3PQ58FF7 597 aa22.58■■□□□ 1.21
CLTCL1-203ENST00000449918 RBM46Q8TBY0 533 aaKnown RBP22.58■■□□□ 1.21
CLTCL1-203ENST00000449918 HDGFL1Q5TGJ6 251 aa22.57■■□□□ 1.2
CLTCL1-203ENST00000449918 RTKN2Q8IZC4 609 aa22.57■■□□□ 1.2
CLTCL1-203ENST00000449918 XAGE3Q8WTP9 111 aa22.57■■□□□ 1.2
CLTCL1-203ENST00000449918 NTSR2O95665 410 aa22.56■■□□□ 1.2
CLTCL1-203ENST00000449918 RPGRQ92834 1020 aaKnown RBP22.56■■□□□ 1.2
CLTCL1-203ENST00000449918 UTP14AQ9BVJ6 771 aaKnown RBP22.56■■□□□ 1.2
CLTCL1-203ENST00000449918 MBIPQ9NS73 344 aa22.56■■□□□ 1.2
CLTCL1-203ENST00000449918 IFT57Q9NWB7 429 aa22.56■■□□□ 1.2
CLTCL1-203ENST00000449918 NUP98P52948 1817 aa22.56■■□□□ 1.2
CLTCL1-203ENST00000449918 SLX4Q8IY92 1834 aa22.56■■□□□ 1.2
CLTCL1-203ENST00000449918 ABCC12Q96J65 1359 aa22.55■■□□□ 1.2
CLTCL1-203ENST00000449918 VEGFAP15692 232 aaPredicted RBP22.55■■□□□ 1.2
CLTCL1-203ENST00000449918 GNAI1P63096 354 aa22.55■■□□□ 1.2
CLTCL1-203ENST00000449918 DUSP27Q5VZP5 1158 aa22.55■■□□□ 1.2
CLTCL1-203ENST00000449918 CHPF2Q9P2E5 772 aa22.55■■□□□ 1.2
CLTCL1-203ENST00000449918 DBF4Q9UBU7 674 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms