RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CCDC102AQ96A19 550 aa14.53□□□□□ -0.08
UBE3B-204ENST00000449510 PAXBP1Q9Y5B6 917 aa14.53□□□□□ -0.08
UBE3B-204ENST00000449510 KIF20AO95235 890 aa14.53□□□□□ -0.08
UBE3B-204ENST00000449510 ANKRD1Q15327 319 aa14.53□□□□□ -0.08
UBE3B-204ENST00000449510 ADCK5Q3MIX3 580 aa14.53□□□□□ -0.08
UBE3B-204ENST00000449510 GNAT3A8MTJ3 354 aa14.52□□□□□ -0.08
UBE3B-204ENST00000449510 PHACTR2O75167 634 aa14.52□□□□□ -0.08
UBE3B-204ENST00000449510 OLFM4Q6UX06 510 aa14.52□□□□□ -0.08
UBE3B-204ENST00000449510 TTC6Q86TZ1 520 aa14.52□□□□□ -0.08
UBE3B-204ENST00000449510 EDC3Q96F86 508 aaKnown RBP14.52□□□□□ -0.08
UBE3B-204ENST00000449510 TRIM34Q9BYJ4 488 aa14.52□□□□□ -0.08
UBE3B-204ENST00000449510 SMTNL1A8MU46 457 aa14.52□□□□□ -0.09
UBE3B-204ENST00000449510 JAK2O60674 1132 aa14.52□□□□□ -0.09
UBE3B-204ENST00000449510 LARGE1O95461 756 aa14.52□□□□□ -0.09
UBE3B-204ENST00000449510 KLHL10Q6JEL2 608 aa14.52□□□□□ -0.09
UBE3B-204ENST00000449510 RUFY3Q7L099 469 aa14.52□□□□□ -0.09
UBE3B-204ENST00000449510 ZNF396Q96N95 335 aaPredicted RBP14.52□□□□□ -0.09
UBE3B-204ENST00000449510 ABCC4O15439 1325 aa14.52□□□□□ -0.09
UBE3B-204ENST00000449510 MCM6Q14566 821 aa14.52□□□□□ -0.09
UBE3B-204ENST00000449510 DDX46Q7L014 1031 aaKnown RBP14.52□□□□□ -0.09
UBE3B-204ENST00000449510 CERS3Q8IU89 383 aa14.52□□□□□ -0.09
UBE3B-204ENST00000449510 ANO10Q9NW15 660 aa14.52□□□□□ -0.09
UBE3B-204ENST00000449510 NBPF7P0C2Y1 421 aaPredicted RBP14.51□□□□□ -0.09
UBE3B-204ENST00000449510 PTH1RQ03431 593 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 ERCC6LQ2NKX8 1250 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 ZNF530Q6P9A1 599 aaPredicted RBP14.51□□□□□ -0.09
UBE3B-204ENST00000449510 KIAA1524Q8TCG1 905 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 DNAAF4Q8WXU2 420 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 ABCA5Q8WWZ7 1642 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 DDX58O95786 925 aaKnown RBP14.51□□□□□ -0.09
UBE3B-204ENST00000449510 TRIM29Q14134 588 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 CWF19L2Q2TBE0 894 aaKnown RBP14.51□□□□□ -0.09
UBE3B-204ENST00000449510 SLC52A1Q9NWF4 448 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 ERVK-7P63135 1459 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 NR1I2O75469 434 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 IL13P35225 146 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 ME3Q16798 604 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 OTUD7BQ6GQQ9 843 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 CYB5RLQ6IPT4 315 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 C10orf67Q8IYJ2 551 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 PHF23Q9BUL5 403 aaPredicted RBP14.51□□□□□ -0.09
UBE3B-204ENST00000449510 CALCOCO1Q9P1Z2 691 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 CHPF2Q9P2E5 772 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 KIAA0556O60303 1618 aa14.51□□□□□ -0.09
UBE3B-204ENST00000449510 RPGRIP1LQ68CZ1 1315 aa14.5□□□□□ -0.09
UBE3B-204ENST00000449510 WASLO00401 505 aaPredicted RBP14.5□□□□□ -0.09
UBE3B-204ENST00000449510 SLU7O95391 586 aaKnown RBP14.5□□□□□ -0.09
UBE3B-204ENST00000449510 DDIT3P35638 169 aa14.5□□□□□ -0.09
UBE3B-204ENST00000449510 NMIQ13287 307 aaPredicted RBP14.5□□□□□ -0.09
UBE3B-204ENST00000449510 RRP12Q5JTH9 1297 aaKnown RBP14.5□□□□□ -0.09
UBE3B-204ENST00000449510 CCDC144CPQ8IYA2 1237 aa14.5□□□□□ -0.09
UBE3B-204ENST00000449510 A0A1B0GVL5 298 aa14.5□□□□□ -0.09
UBE3B-204ENST00000449510 MARCKSP29966 332 aaPredicted RBP14.5□□□□□ -0.09
UBE3B-204ENST00000449510 GNG11P61952 73 aa14.5□□□□□ -0.09
UBE3B-204ENST00000449510 ZSCAN25Q6NSZ9 544 aa14.5□□□□□ -0.09
UBE3B-204ENST00000449510 LEKR1Q6ZMV7 388 aa14.5□□□□□ -0.09
UBE3B-204ENST00000449510 SNRKQ9NRH2 765 aa14.5□□□□□ -0.09
UBE3B-204ENST00000449510 BTBD11A6QL63 1104 aa14.5□□□□□ -0.09
UBE3B-204ENST00000449510 TRDNQ13061 729 aa14.5□□□□□ -0.09
UBE3B-204ENST00000449510 IFNKQ9P0W0 207 aa14.5□□□□□ -0.09
UBE3B-204ENST00000449510 AK9Q5TCS8 1911 aa14.49□□□□□ -0.09
UBE3B-204ENST00000449510 BMS1Q14692 1282 aaKnown RBP14.49□□□□□ -0.09
UBE3B-204ENST00000449510 PCMTD1Q96MG8 357 aaPredicted RBP14.49□□□□□ -0.09
UBE3B-204ENST00000449510 RTL1A6NKG5 1358 aa14.49□□□□□ -0.09
UBE3B-204ENST00000449510 SGSM2O43147 1006 aa14.49□□□□□ -0.09
UBE3B-204ENST00000449510 ZNF75DP51815 510 aa14.49□□□□□ -0.09
UBE3B-204ENST00000449510 CREB3L3Q68CJ9 461 aa14.49□□□□□ -0.09
UBE3B-204ENST00000449510 CACTINQ8WUQ7 758 aaKnown RBP14.49□□□□□ -0.09
UBE3B-204ENST00000449510 FEZ1Q99689 392 aa14.49□□□□□ -0.09
UBE3B-204ENST00000449510 NSD2O96028 1365 aa14.49□□□□□ -0.09
UBE3B-204ENST00000449510 CCDC129Q6ZRS4 1044 aa14.49□□□□□ -0.09
UBE3B-204ENST00000449510 NCOA5Q9HCD5 579 aaKnown RBP14.49□□□□□ -0.09
UBE3B-204ENST00000449510 MTMR7Q9Y216 660 aa14.49□□□□□ -0.09
UBE3B-204ENST00000449510 ABCC10Q5T3U5 1492 aa14.48□□□□□ -0.09
UBE3B-204ENST00000449510 AXDND1Q5T1B0 1012 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-204ENST00000449510 CPLX2Q6PUV4 134 aaKnown RBP14.48□□□□□ -0.09
UBE3B-204ENST00000449510 NOC3LQ8WTT2 800 aaKnown RBP14.48□□□□□ -0.09
UBE3B-204ENST00000449510 MTMR6Q9Y217 621 aa14.48□□□□□ -0.09
UBE3B-204ENST00000449510 KDM5DQ9BY66 1539 aa14.48□□□□□ -0.09
UBE3B-204ENST00000449510 PATL2C9JE40 543 aaKnown RBP14.48□□□□□ -0.09
UBE3B-204ENST00000449510 ZSCAN20P17040 1043 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-204ENST00000449510 STX1AQ16623 288 aa14.48□□□□□ -0.09
UBE3B-204ENST00000449510 Q6ZUG5 572 aa14.48□□□□□ -0.09
UBE3B-204ENST00000449510 MAP3K2Q9Y2U5 619 aa14.48□□□□□ -0.09
UBE3B-204ENST00000449510 HSPA4P34932 840 aa14.48□□□□□ -0.09
UBE3B-204ENST00000449510 ZNF397Q8NF99 534 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-204ENST00000449510 TAF3Q5VWG9 929 aa14.47□□□□□ -0.09
UBE3B-204ENST00000449510 NEK1Q96PY6 1258 aa14.47□□□□□ -0.09
UBE3B-204ENST00000449510 FTOQ9C0B1 505 aaKnown RBP eCLIP14.47□□□□□ -0.09
UBE3B-204ENST00000449510 NPHP3Q7Z494 1330 aa14.47□□□□□ -0.09
UBE3B-204ENST00000449510 ABCC2Q92887 1545 aa14.47□□□□□ -0.09
UBE3B-204ENST00000449510 SLC3A2P08195 630 aaKnown RBP14.47□□□□□ -0.09
UBE3B-204ENST00000449510 UGGT1Q9NYU2 1555 aa14.47□□□□□ -0.09
UBE3B-204ENST00000449510 IBTKQ9P2D0 1353 aaPredicted RBP14.47□□□□□ -0.09
UBE3B-204ENST00000449510 ATP5J2-PTCD1G3V325 749 aa14.47□□□□□ -0.09
UBE3B-204ENST00000449510 PTCD1O75127 700 aaKnown RBP14.47□□□□□ -0.09
UBE3B-204ENST00000449510 TOP1P11387 765 aaKnown RBP14.47□□□□□ -0.09
UBE3B-204ENST00000449510 PSME1Q06323 249 aa14.47□□□□□ -0.09
UBE3B-204ENST00000449510 ZNF710Q8N1W2 664 aa14.47□□□□□ -0.09
UBE3B-204ENST00000449510 AK7Q96M32 723 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms